Wall clock time and date at job start Sat Mar 6 2021 21:26:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.35530 * 125.67755 * 2 1 4 4 C 1.35457 * 108.87601 * 179.97438 * 3 2 1 5 5 C 1.50696 * 126.06936 * 179.97438 * 4 3 2 6 6 O 1.42903 * 109.47137 * 299.99861 * 5 4 3 7 7 Si 1.86308 * 109.46799 * 180.02562 * 5 4 3 8 8 C 1.39840 * 107.85897 * 359.97438 * 4 3 2 9 9 C 1.37652 * 125.67814 * 179.97438 * 2 1 3 10 10 C 1.46672 * 126.23231 * 0.02562 * 9 2 1 11 11 O 1.21700 * 119.99628 * 187.55565 * 10 9 2 12 12 N 1.34777 * 120.00314 * 7.56344 * 10 9 2 13 13 C 1.46497 * 119.99985 * 186.35216 * 12 10 9 14 14 C 1.53001 * 109.47250 * 270.23532 * 13 12 10 15 15 C 1.50696 * 112.85051 * 304.48412 * 14 13 12 16 16 C 1.38242 * 119.99660 * 246.98285 * 15 14 13 17 17 C 1.38233 * 119.99526 * 179.78705 * 16 15 14 18 18 C 1.38234 * 120.00350 * 0.45863 * 17 16 15 19 19 C 1.38231 * 119.99719 * 359.77584 * 18 17 16 20 20 C 1.38227 * 120.00181 * 67.25309 * 15 14 13 21 21 C 1.53779 * 113.61389 * 173.28400 * 14 13 12 22 22 C 1.53787 * 87.08207 * 270.88574 * 21 14 13 23 23 H 1.09000 * 113.60961 * 89.19885 * 22 21 14 24 24 F 1.39898 * 113.61521 * 220.01982 * 22 21 14 25 25 C 1.53784 * 113.60925 * 75.68037 * 14 13 12 26 26 H 1.08998 * 109.47584 * 97.90972 * 1 2 3 27 27 H 1.09001 * 109.46940 * 217.91098 * 1 2 3 28 28 H 1.09000 * 109.47260 * 337.89988 * 1 2 3 29 29 H 1.08002 * 125.56590 * 359.71902 * 3 2 1 30 30 H 1.08992 * 109.47222 * 60.00165 * 5 4 3 31 31 H 0.96704 * 113.99707 * 300.00141 * 6 5 4 32 32 H 1.48497 * 109.99989 * 58.68075 * 7 5 4 33 33 H 1.48506 * 109.99676 * 180.02562 * 7 5 4 34 34 H 1.07994 * 126.45365 * 179.97438 * 8 4 3 35 35 H 0.96998 * 119.99917 * 6.34666 * 12 10 9 36 36 H 1.09001 * 109.47396 * 30.24442 * 13 12 10 37 37 H 1.08999 * 109.46698 * 150.23735 * 13 12 10 38 38 H 1.07993 * 120.00108 * 0.02562 * 16 15 14 39 39 H 1.08000 * 119.99478 * 180.25119 * 17 16 15 40 40 H 1.08004 * 120.00146 * 179.78700 * 18 17 16 41 41 H 1.08004 * 119.99914 * 179.97438 * 19 18 17 42 42 H 1.08000 * 120.00287 * 359.97438 * 20 15 14 43 43 H 1.09001 * 113.61606 * 25.43316 * 21 14 13 44 44 H 1.08999 * 113.61173 * 156.25473 * 21 14 13 45 45 H 1.09005 * 113.60668 * 203.66719 * 25 14 13 46 46 H 1.09001 * 113.61500 * 334.56301 * 25 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2554 1.1009 0.0000 4 6 3.5522 0.7094 0.0006 5 6 4.7536 1.6190 0.0002 6 8 4.7271 2.4428 -1.1672 7 14 6.3090 0.5933 0.0005 8 6 3.5780 -0.6888 0.0015 9 6 2.2678 -1.1182 0.0005 10 6 1.8124 -2.5124 0.0006 11 8 2.6166 -3.4151 0.1396 12 7 0.5034 -2.7938 -0.1535 13 6 0.0294 -4.1730 -0.0147 14 6 0.0821 -4.8698 -1.3759 15 6 -0.6876 -4.1322 -2.4410 16 6 -1.8279 -4.6943 -2.9840 17 6 -2.5364 -4.0158 -3.9579 18 6 -2.0994 -2.7795 -4.3956 19 6 -0.9565 -2.2197 -3.8561 20 6 -0.2504 -2.8963 -2.8790 21 6 -0.2401 -6.3721 -1.3117 22 6 1.2617 -6.6039 -1.0752 23 1 1.5464 -6.5830 -0.0232 24 9 1.7708 -7.7163 -1.7538 25 6 1.5025 -5.2705 -1.8081 26 1 -0.3634 -0.1414 -1.0178 27 1 -0.3633 -0.8108 0.6314 28 1 -0.3634 0.9522 0.3866 29 1 1.9082 2.1236 -0.0043 30 1 4.7330 2.2485 0.8897 31 1 4.7434 1.9482 -1.9980 32 1 6.3336 -0.2922 -1.1913 33 1 7.5012 1.4788 0.0008 34 1 4.4583 -1.3143 0.0018 35 1 -0.1249 -2.0831 -0.3561 36 1 0.6655 -4.7066 0.6916 37 1 -0.9970 -4.1692 0.3520 38 1 -2.1673 -5.6617 -2.6446 39 1 -3.4295 -4.4531 -4.3792 40 1 -2.6511 -2.2510 -5.1590 41 1 -0.6148 -1.2540 -4.1983 42 1 0.6427 -2.4589 -2.4576 43 1 -0.8637 -6.6490 -0.4617 44 1 -0.6032 -6.7813 -2.2544 45 1 1.6162 -5.3794 -2.8867 46 1 2.2846 -4.6585 -1.3587 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13458982_10803934.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:26:04 Heat of formation + Delta-G solvation = 3.278402 kcal Electronic energy + Delta-G solvation = -31188.010378 eV Core-core repulsion = 26960.864182 eV Total energy + Delta-G solvation = -4227.146195 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.153 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -48.37384 -42.74146 -41.62759 -39.91882 -38.63583 -37.84272 -35.87121 -34.03082 -32.03334 -31.93962 -30.99390 -29.10965 -28.20768 -27.03467 -25.88062 -25.06968 -23.39525 -23.32585 -22.54256 -21.40103 -20.94119 -19.84529 -19.11431 -18.30683 -17.62785 -17.41777 -17.02661 -17.00164 -16.79481 -16.57598 -16.23100 -15.99406 -15.77653 -15.55586 -15.44965 -15.41464 -15.09313 -14.59226 -14.55292 -14.40754 -14.23842 -13.86973 -13.79548 -13.62116 -13.55097 -13.47891 -13.19660 -13.10223 -12.75995 -12.37336 -12.26682 -12.22880 -11.92099 -11.72850 -11.34536 -11.22051 -11.05783 -10.52111 -10.25101 -9.93758 -9.82235 -9.70855 -9.28123 -4.80092 0.29149 0.35713 0.37957 1.38315 1.49434 1.60570 1.79051 1.93979 2.10138 2.25972 2.73329 3.18950 3.25340 3.35557 3.42943 3.50299 3.55317 3.63719 3.70481 3.77902 3.85757 3.94133 3.99196 4.00692 4.06301 4.10231 4.13305 4.18321 4.30299 4.40087 4.46581 4.56520 4.60447 4.64963 4.67601 4.68975 4.83384 4.91407 4.99157 5.01291 5.02796 5.14823 5.21849 5.33519 5.47635 5.51703 5.57759 5.61143 5.80355 5.96916 5.99594 6.28280 6.51849 7.04604 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.051 3.949 2 N -0.429 5.429 3 C 0.057 3.943 4 C -0.212 4.212 5 C -0.038 4.038 6 O -0.535 6.535 7 Si 0.687 3.313 8 C -0.097 4.097 9 C -0.059 4.059 10 C 0.591 3.409 11 O -0.517 6.517 12 N -0.734 5.734 13 C 0.139 3.861 14 C -0.061 4.061 15 C -0.061 4.061 16 C -0.116 4.116 17 C -0.116 4.116 18 C -0.121 4.121 19 C -0.120 4.120 20 C -0.116 4.116 21 C -0.149 4.149 22 C 0.068 3.932 23 H 0.111 0.889 24 F -0.207 7.207 25 C -0.156 4.156 26 H 0.083 0.917 27 H 0.089 0.911 28 H 0.101 0.899 29 H 0.173 0.827 30 H 0.114 0.886 31 H 0.375 0.625 32 H -0.260 1.260 33 H -0.260 1.260 34 H 0.154 0.846 35 H 0.399 0.601 36 H 0.095 0.905 37 H 0.088 0.912 38 H 0.125 0.875 39 H 0.123 0.877 40 H 0.122 0.878 41 H 0.120 0.880 42 H 0.117 0.883 43 H 0.084 0.916 44 H 0.101 0.899 45 H 0.089 0.911 46 H 0.109 0.891 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.322 2.586 2.229 7.185 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.090 4.090 2 N -0.105 5.105 3 C -0.079 4.079 4 C -0.218 4.218 5 C -0.149 4.149 6 O -0.342 6.342 7 Si 0.588 3.412 8 C -0.123 4.123 9 C -0.170 4.170 10 C 0.380 3.620 11 O -0.393 6.393 12 N -0.389 5.389 13 C 0.015 3.985 14 C -0.062 4.062 15 C -0.061 4.061 16 C -0.133 4.133 17 C -0.134 4.134 18 C -0.140 4.140 19 C -0.138 4.138 20 C -0.135 4.135 21 C -0.187 4.187 22 C 0.032 3.968 23 H 0.129 0.871 24 F -0.188 7.188 25 C -0.194 4.194 26 H 0.102 0.898 27 H 0.107 0.893 28 H 0.119 0.881 29 H 0.190 0.810 30 H 0.132 0.868 31 H 0.222 0.778 32 H -0.184 1.184 33 H -0.185 1.185 34 H 0.171 0.829 35 H 0.238 0.762 36 H 0.113 0.887 37 H 0.106 0.894 38 H 0.143 0.857 39 H 0.141 0.859 40 H 0.140 0.860 41 H 0.138 0.862 42 H 0.135 0.865 43 H 0.103 0.897 44 H 0.119 0.881 45 H 0.107 0.893 46 H 0.127 0.873 Dipole moment (debyes) X Y Z Total from point charges -5.416 2.106 2.370 6.275 hybrid contribution -0.983 0.625 -1.404 1.825 sum -6.399 2.731 0.966 7.024 Atomic orbital electron populations 1.22401 0.76967 1.05718 1.03922 1.44028 1.06192 1.05751 1.54482 1.21887 0.89864 0.91503 1.04634 1.19801 0.94575 0.93843 1.13574 1.24268 1.02680 0.97453 0.90489 1.86571 1.95827 1.35867 1.15890 0.94835 0.75768 0.80825 0.89736 1.21201 0.94977 0.93975 1.02158 1.20290 0.90845 0.86124 1.19726 1.17057 0.82179 0.86670 0.76133 1.90799 1.53401 1.45792 1.49340 1.46325 1.08675 1.10561 1.73344 1.21264 1.00767 0.81771 0.94686 1.20999 0.96614 0.94017 0.94599 1.19451 0.95253 0.94590 0.96841 1.21121 0.95005 1.00103 0.97118 1.21199 0.99875 0.95136 0.97170 1.21204 0.96823 0.95942 0.99984 1.21177 0.95623 1.00104 0.96885 1.21050 0.99833 0.94925 0.97657 1.23733 0.96555 0.94206 1.04205 1.23115 0.94116 0.82743 0.96865 0.87122 1.92808 1.88592 1.55382 1.81987 1.23975 0.97161 0.96443 1.01774 0.89815 0.89267 0.88084 0.81012 0.86847 0.77763 1.18435 1.18499 0.82856 0.76168 0.88720 0.89370 0.85720 0.85894 0.86038 0.86204 0.86466 0.89693 0.88099 0.89276 0.87283 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.26 9.41 59.85 0.56 0.30 16 2 N -0.43 0.75 3.16 -120.24 -0.38 0.37 16 3 C 0.06 -0.07 11.27 -16.91 -0.19 -0.26 16 4 C -0.21 -0.01 5.41 -105.02 -0.57 -0.57 16 5 C -0.04 0.00 3.00 36.00 0.11 0.11 16 6 O -0.54 -0.60 12.88 -35.23 -0.45 -1.05 16 7 Si 0.69 0.06 30.64 -169.99 -5.21 -5.15 16 8 C -0.10 -0.10 9.14 -39.12 -0.36 -0.46 16 9 C -0.06 -0.03 6.88 -81.98 -0.56 -0.60 16 10 C 0.59 0.55 7.10 -12.86 -0.09 0.46 16 11 O -0.52 -1.97 13.78 5.19 0.07 -1.90 16 12 N -0.73 1.39 2.95 -61.62 -0.18 1.21 16 13 C 0.14 -0.29 5.42 -4.04 -0.02 -0.32 16 14 C -0.06 0.06 0.89 -154.85 -0.14 -0.08 16 15 C -0.06 0.03 4.85 -104.63 -0.51 -0.48 16 16 C -0.12 0.06 9.04 -39.58 -0.36 -0.30 16 17 C -0.12 0.06 10.05 -39.58 -0.40 -0.34 16 18 C -0.12 0.07 10.05 -39.59 -0.40 -0.33 16 19 C -0.12 0.07 10.05 -39.58 -0.40 -0.33 16 20 C -0.12 0.04 8.28 -39.59 -0.33 -0.29 16 21 C -0.15 0.17 6.20 -25.92 -0.16 0.01 16 22 C 0.07 0.07 5.32 -25.78 -0.14 -0.07 16 23 H 0.11 -0.02 7.61 -51.93 -0.40 -0.41 16 24 F -0.21 -0.86 17.41 2.25 0.04 -0.82 16 25 C -0.16 -0.21 6.92 -25.78 -0.18 -0.39 16 26 H 0.08 -0.50 7.96 -51.93 -0.41 -0.91 16 27 H 0.09 -0.51 6.30 -51.93 -0.33 -0.84 16 28 H 0.10 -0.67 8.11 -51.93 -0.42 -1.09 16 29 H 0.17 -0.52 8.06 -52.49 -0.42 -0.95 16 30 H 0.11 -0.11 7.96 -51.93 -0.41 -0.52 16 31 H 0.37 -0.49 8.70 45.56 0.40 -0.10 16 32 H -0.26 -0.66 7.11 56.52 0.40 -0.26 16 33 H -0.26 -0.82 7.11 56.52 0.40 -0.42 16 34 H 0.15 0.14 6.38 -52.49 -0.33 -0.19 16 35 H 0.40 -1.46 4.34 -40.82 -0.18 -1.63 16 36 H 0.09 -0.13 6.69 -51.93 -0.35 -0.48 16 37 H 0.09 -0.36 8.14 -51.93 -0.42 -0.78 16 38 H 0.12 -0.22 6.47 -52.49 -0.34 -0.56 16 39 H 0.12 -0.24 8.06 -52.49 -0.42 -0.66 16 40 H 0.12 -0.23 8.06 -52.48 -0.42 -0.66 16 41 H 0.12 -0.22 8.06 -52.48 -0.42 -0.65 16 42 H 0.12 -0.01 6.55 -52.49 -0.34 -0.36 16 43 H 0.08 -0.24 8.10 -51.93 -0.42 -0.66 16 44 H 0.10 -0.07 6.86 -51.93 -0.36 -0.42 16 45 H 0.09 0.22 8.09 -51.93 -0.42 -0.20 16 46 H 0.11 0.31 4.81 -51.93 -0.25 0.06 16 LS Contribution 369.62 15.07 5.57 5.57 Total: 0.00 -7.85 369.62 -10.54 -18.39 By element: Atomic # 1 Polarization: -6.82 SS G_CDS: -5.87 Total: -12.69 kcal Atomic # 6 Polarization: 0.20 SS G_CDS: -4.12 Total: -3.93 kcal Atomic # 7 Polarization: 2.14 SS G_CDS: -0.56 Total: 1.58 kcal Atomic # 8 Polarization: -2.57 SS G_CDS: -0.38 Total: -2.95 kcal Atomic # 9 Polarization: -0.86 SS G_CDS: 0.04 Total: -0.82 kcal Atomic # 14 Polarization: 0.06 SS G_CDS: -5.21 Total: -5.15 kcal Total LS contribution 5.57 Total: 5.57 kcal Total: -7.85 -10.54 -18.39 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13458982_10803934.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 21.669 kcal (2) G-P(sol) polarization free energy of solvation -7.850 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 13.819 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.541 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.390 kcal (6) G-S(sol) free energy of system = (1) + (5) 3.278 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds