Wall clock time and date at job start Sat Mar 6 2021 21:26:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46499 * 1 3 3 C 1.35530 * 125.67755 * 2 1 4 4 C 1.35457 * 108.87601 * 179.97438 * 3 2 1 5 5 C 1.50696 * 126.06936 * 179.97438 * 4 3 2 6 6 O 1.42903 * 109.47137 * 299.99861 * 5 4 3 7 7 Si 1.86308 * 109.46799 * 180.02562 * 5 4 3 8 8 C 1.39840 * 107.85897 * 359.97438 * 4 3 2 9 9 C 1.37652 * 125.67814 * 179.97438 * 2 1 3 10 10 C 1.46672 * 126.23231 * 0.02562 * 9 2 1 11 11 O 1.21700 * 119.99628 * 187.55565 * 10 9 2 12 12 N 1.34777 * 120.00314 * 7.56344 * 10 9 2 13 13 C 1.46497 * 119.99985 * 186.35216 * 12 10 9 14 14 C 1.53001 * 109.47250 * 270.23532 * 13 12 10 15 15 C 1.50696 * 112.85051 * 304.48412 * 14 13 12 16 16 C 1.38242 * 119.99660 * 246.98285 * 15 14 13 17 17 C 1.38233 * 119.99526 * 179.78705 * 16 15 14 18 18 C 1.38234 * 120.00350 * 0.45863 * 17 16 15 19 19 C 1.38231 * 119.99719 * 359.77584 * 18 17 16 20 20 C 1.38227 * 120.00181 * 67.25309 * 15 14 13 21 21 C 1.53779 * 113.61389 * 173.28400 * 14 13 12 22 22 C 1.53787 * 87.08207 * 270.88574 * 21 14 13 23 23 H 1.09000 * 113.60961 * 89.19885 * 22 21 14 24 24 F 1.39898 * 113.61521 * 220.01982 * 22 21 14 25 25 C 1.53784 * 113.60925 * 75.68037 * 14 13 12 26 26 H 1.08998 * 109.47584 * 97.90972 * 1 2 3 27 27 H 1.09001 * 109.46940 * 217.91098 * 1 2 3 28 28 H 1.09000 * 109.47260 * 337.89988 * 1 2 3 29 29 H 1.08002 * 125.56590 * 359.71902 * 3 2 1 30 30 H 1.08992 * 109.47222 * 60.00165 * 5 4 3 31 31 H 0.96704 * 113.99707 * 300.00141 * 6 5 4 32 32 H 1.48497 * 109.99989 * 58.68075 * 7 5 4 33 33 H 1.48506 * 109.99676 * 180.02562 * 7 5 4 34 34 H 1.07994 * 126.45365 * 179.97438 * 8 4 3 35 35 H 0.96998 * 119.99917 * 6.34666 * 12 10 9 36 36 H 1.09001 * 109.47396 * 30.24442 * 13 12 10 37 37 H 1.08999 * 109.46698 * 150.23735 * 13 12 10 38 38 H 1.07993 * 120.00108 * 0.02562 * 16 15 14 39 39 H 1.08000 * 119.99478 * 180.25119 * 17 16 15 40 40 H 1.08004 * 120.00146 * 179.78700 * 18 17 16 41 41 H 1.08004 * 119.99914 * 179.97438 * 19 18 17 42 42 H 1.08000 * 120.00287 * 359.97438 * 20 15 14 43 43 H 1.09001 * 113.61606 * 25.43316 * 21 14 13 44 44 H 1.08999 * 113.61173 * 156.25473 * 21 14 13 45 45 H 1.09005 * 113.60668 * 203.66719 * 25 14 13 46 46 H 1.09001 * 113.61500 * 334.56301 * 25 14 13 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2554 1.1009 0.0000 4 6 3.5522 0.7094 0.0006 5 6 4.7536 1.6190 0.0002 6 8 4.7271 2.4428 -1.1672 7 14 6.3090 0.5933 0.0005 8 6 3.5780 -0.6888 0.0015 9 6 2.2678 -1.1182 0.0005 10 6 1.8124 -2.5124 0.0006 11 8 2.6166 -3.4151 0.1396 12 7 0.5034 -2.7938 -0.1535 13 6 0.0294 -4.1730 -0.0147 14 6 0.0821 -4.8698 -1.3759 15 6 -0.6876 -4.1322 -2.4410 16 6 -1.8279 -4.6943 -2.9840 17 6 -2.5364 -4.0158 -3.9579 18 6 -2.0994 -2.7795 -4.3956 19 6 -0.9565 -2.2197 -3.8561 20 6 -0.2504 -2.8963 -2.8790 21 6 -0.2401 -6.3721 -1.3117 22 6 1.2617 -6.6039 -1.0752 23 1 1.5464 -6.5830 -0.0232 24 9 1.7708 -7.7163 -1.7538 25 6 1.5025 -5.2705 -1.8081 26 1 -0.3634 -0.1414 -1.0178 27 1 -0.3633 -0.8108 0.6314 28 1 -0.3634 0.9522 0.3866 29 1 1.9082 2.1236 -0.0043 30 1 4.7330 2.2485 0.8897 31 1 4.7434 1.9482 -1.9980 32 1 6.3336 -0.2922 -1.1913 33 1 7.5012 1.4788 0.0008 34 1 4.4583 -1.3143 0.0018 35 1 -0.1249 -2.0831 -0.3561 36 1 0.6655 -4.7066 0.6916 37 1 -0.9970 -4.1692 0.3520 38 1 -2.1673 -5.6617 -2.6446 39 1 -3.4295 -4.4531 -4.3792 40 1 -2.6511 -2.2510 -5.1590 41 1 -0.6148 -1.2540 -4.1983 42 1 0.6427 -2.4589 -2.4576 43 1 -0.8637 -6.6490 -0.4617 44 1 -0.6032 -6.7813 -2.2544 45 1 1.6162 -5.3794 -2.8867 46 1 2.2846 -4.6585 -1.3587 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13458982_10803934.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:26:03 Heat of formation + Delta-G solvation = 8.516081 kcal Electronic energy + Delta-G solvation = -31187.783255 eV Core-core repulsion = 26960.864182 eV Total energy + Delta-G solvation = -4226.919073 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.153 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -48.59939 -42.66493 -41.58094 -39.91555 -38.61223 -37.86589 -35.83927 -33.90046 -31.97467 -31.85341 -30.94616 -28.97386 -28.06747 -27.04471 -25.82991 -25.00899 -23.32489 -23.24965 -22.53400 -21.34505 -20.89166 -19.80897 -19.04950 -18.30169 -17.62289 -17.39088 -16.94631 -16.93264 -16.80283 -16.56947 -16.21229 -16.01496 -15.71277 -15.51849 -15.47028 -15.38897 -15.10729 -14.56934 -14.51157 -14.32209 -14.14864 -13.92662 -13.77337 -13.58118 -13.50985 -13.25991 -13.08800 -12.95025 -12.77132 -12.37591 -12.33813 -12.21195 -11.90084 -11.86009 -11.36020 -11.23398 -11.12616 -10.56269 -10.22516 -9.86257 -9.73591 -9.64084 -9.22620 -4.87138 0.34118 0.41642 0.44590 1.36676 1.57681 1.63257 1.75886 1.98713 2.03551 2.25233 2.80314 3.20810 3.26594 3.44063 3.51218 3.61892 3.66047 3.74609 3.79969 3.89479 4.04508 4.07538 4.10442 4.19740 4.23607 4.24773 4.26871 4.39060 4.45399 4.57375 4.57688 4.63219 4.67520 4.70742 4.72695 4.75948 4.88919 4.95210 4.99434 5.08387 5.10327 5.11382 5.27056 5.29047 5.55403 5.60436 5.64263 5.65281 5.84997 6.06243 6.16177 6.38817 6.56732 7.06720 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.041 3.959 2 N -0.420 5.420 3 C 0.065 3.935 4 C -0.223 4.223 5 C -0.031 4.031 6 O -0.548 6.548 7 Si 0.746 3.254 8 C -0.119 4.119 9 C -0.074 4.074 10 C 0.590 3.410 11 O -0.554 6.554 12 N -0.719 5.719 13 C 0.136 3.864 14 C -0.047 4.047 15 C -0.067 4.067 16 C -0.122 4.122 17 C -0.124 4.124 18 C -0.130 4.130 19 C -0.126 4.126 20 C -0.123 4.123 21 C -0.137 4.137 22 C 0.057 3.943 23 H 0.121 0.879 24 F -0.228 7.228 25 C -0.162 4.162 26 H 0.095 0.905 27 H 0.096 0.904 28 H 0.124 0.876 29 H 0.197 0.803 30 H 0.127 0.873 31 H 0.383 0.617 32 H -0.299 1.299 33 H -0.301 1.301 34 H 0.143 0.857 35 H 0.410 0.590 36 H 0.088 0.912 37 H 0.118 0.882 38 H 0.137 0.863 39 H 0.136 0.864 40 H 0.134 0.866 41 H 0.130 0.870 42 H 0.111 0.889 43 H 0.110 0.890 44 H 0.097 0.903 45 H 0.071 0.929 46 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.022 3.481 2.767 10.059 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.099 4.099 2 N -0.094 5.094 3 C -0.072 4.072 4 C -0.229 4.229 5 C -0.143 4.143 6 O -0.356 6.356 7 Si 0.653 3.347 8 C -0.145 4.145 9 C -0.186 4.186 10 C 0.379 3.621 11 O -0.433 6.433 12 N -0.374 5.374 13 C 0.012 3.988 14 C -0.049 4.049 15 C -0.067 4.067 16 C -0.140 4.140 17 C -0.142 4.142 18 C -0.148 4.148 19 C -0.144 4.144 20 C -0.141 4.141 21 C -0.175 4.175 22 C 0.021 3.979 23 H 0.138 0.862 24 F -0.209 7.209 25 C -0.200 4.200 26 H 0.114 0.886 27 H 0.114 0.886 28 H 0.142 0.858 29 H 0.213 0.787 30 H 0.145 0.855 31 H 0.232 0.768 32 H -0.226 1.226 33 H -0.229 1.229 34 H 0.160 0.840 35 H 0.251 0.749 36 H 0.106 0.894 37 H 0.136 0.864 38 H 0.155 0.845 39 H 0.154 0.846 40 H 0.152 0.848 41 H 0.148 0.852 42 H 0.129 0.871 43 H 0.128 0.872 44 H 0.116 0.884 45 H 0.090 0.910 46 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges -8.173 3.003 2.911 9.181 hybrid contribution -0.112 0.349 -1.652 1.692 sum -8.285 3.352 1.259 9.026 Atomic orbital electron populations 1.22726 0.74749 1.07382 1.05058 1.44192 1.07438 1.04766 1.53023 1.22233 0.89435 0.92467 1.03080 1.19760 0.95305 0.93194 1.14639 1.24199 1.02066 0.97323 0.90682 1.86542 1.95757 1.36659 1.16646 0.94120 0.74166 0.78309 0.88056 1.21270 0.95255 0.94696 1.03300 1.20249 0.91173 0.86638 1.20500 1.17171 0.82703 0.86516 0.75745 1.90781 1.54502 1.46789 1.51252 1.46215 1.07872 1.11122 1.72160 1.21407 1.02222 0.81316 0.93839 1.20911 0.94527 0.94372 0.95044 1.19502 0.95476 0.94600 0.97085 1.21306 0.94929 1.00613 0.97119 1.21444 1.00385 0.95241 0.97150 1.21432 0.96929 0.96172 1.00256 1.21345 0.95666 1.00620 0.96747 1.21049 0.99720 0.95223 0.98082 1.23678 0.95085 0.93699 1.05065 1.23404 0.95880 0.81603 0.97032 0.86163 1.92761 1.89103 1.56484 1.82509 1.23918 0.98564 0.96932 1.00572 0.88636 0.88565 0.85801 0.78657 0.85487 0.76793 1.22610 1.22881 0.83977 0.74941 0.89357 0.86395 0.84523 0.84615 0.84836 0.85180 0.87102 0.87153 0.88419 0.91007 0.89000 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 -0.50 9.41 127.77 1.20 0.70 16 2 N -0.42 1.86 3.16 -534.32 -1.69 0.17 16 3 C 0.07 -0.23 11.27 83.48 0.94 0.71 16 4 C -0.22 -0.06 5.41 -20.12 -0.11 -0.16 16 5 C -0.03 0.00 3.00 71.23 0.21 0.21 16 6 O -0.55 -1.26 12.88 -148.98 -1.92 -3.18 16 7 Si 0.75 1.58 30.64 68.60 2.10 3.69 16 8 C -0.12 -0.42 9.14 22.57 0.21 -0.22 16 9 C -0.07 -0.13 6.88 40.35 0.28 0.15 16 10 C 0.59 1.69 7.10 86.45 0.61 2.30 16 11 O -0.55 -5.42 13.78 -4.35 -0.06 -5.48 16 12 N -0.72 2.90 2.95 -467.08 -1.38 1.52 16 13 C 0.14 -0.67 5.42 86.38 0.47 -0.20 16 14 C -0.05 0.10 0.89 -52.40 -0.05 0.05 16 15 C -0.07 0.09 4.85 -19.87 -0.10 -0.01 16 16 C -0.12 0.25 9.04 22.27 0.20 0.45 16 17 C -0.12 0.26 10.05 22.27 0.22 0.48 16 18 C -0.13 0.26 10.05 22.27 0.22 0.48 16 19 C -0.13 0.21 10.05 22.27 0.22 0.44 16 20 C -0.12 0.09 8.28 22.27 0.18 0.27 16 21 C -0.14 0.38 6.20 31.12 0.19 0.57 16 22 C 0.06 0.17 5.32 31.21 0.17 0.33 16 23 H 0.12 0.08 7.61 -2.39 -0.02 0.06 16 24 F -0.23 -2.24 17.41 44.97 0.78 -1.46 16 25 C -0.16 -0.72 6.92 31.21 0.22 -0.50 16 26 H 0.10 -1.34 7.96 -2.39 -0.02 -1.36 16 27 H 0.10 -1.29 6.30 -2.39 -0.02 -1.31 16 28 H 0.12 -2.02 8.11 -2.39 -0.02 -2.04 16 29 H 0.20 -1.67 8.06 -2.91 -0.02 -1.70 16 30 H 0.13 -0.32 7.96 -2.39 -0.02 -0.34 16 31 H 0.38 -0.78 8.70 -74.05 -0.64 -1.43 16 32 H -0.30 -2.50 7.11 99.48 0.71 -1.79 16 33 H -0.30 -2.66 7.11 99.48 0.71 -1.95 16 34 H 0.14 0.68 6.38 -2.91 -0.02 0.66 16 35 H 0.41 -3.42 4.34 -92.71 -0.40 -3.82 16 36 H 0.09 -0.26 6.69 -2.39 -0.02 -0.27 16 37 H 0.12 -1.23 8.14 -2.39 -0.02 -1.25 16 38 H 0.14 -0.67 6.47 -2.91 -0.02 -0.69 16 39 H 0.14 -0.70 8.06 -2.91 -0.02 -0.73 16 40 H 0.13 -0.66 8.06 -2.91 -0.02 -0.69 16 41 H 0.13 -0.57 8.06 -2.91 -0.02 -0.60 16 42 H 0.11 0.04 6.55 -2.91 -0.02 0.02 16 43 H 0.11 -0.84 8.10 -2.39 -0.02 -0.86 16 44 H 0.10 -0.17 6.86 -2.39 -0.02 -0.18 16 45 H 0.07 0.53 8.09 -2.38 -0.02 0.51 16 46 H 0.09 0.77 4.81 -2.39 -0.01 0.76 16 Total: 0.00 -20.86 369.62 3.17 -17.70 By element: Atomic # 1 Polarization: -19.03 SS G_CDS: 0.02 Total: -19.00 kcal Atomic # 6 Polarization: 0.75 SS G_CDS: 5.30 Total: 6.05 kcal Atomic # 7 Polarization: 4.76 SS G_CDS: -3.07 Total: 1.69 kcal Atomic # 8 Polarization: -6.68 SS G_CDS: -1.98 Total: -8.66 kcal Atomic # 9 Polarization: -2.24 SS G_CDS: 0.78 Total: -1.46 kcal Atomic # 14 Polarization: 1.58 SS G_CDS: 2.10 Total: 3.69 kcal Total: -20.86 3.17 -17.70 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13458982_10803934.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 26.212 kcal (2) G-P(sol) polarization free energy of solvation -20.863 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 5.349 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.168 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.696 kcal (6) G-S(sol) free energy of system = (1) + (5) 8.516 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds