Wall clock time and date at job start Sat Mar 6 2021 21:26:07 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.37650 * 125.68010 * 2 1 4 4 C 1.46676 * 126.23192 * 0.02562 * 3 2 1 5 5 O 1.21695 * 119.99656 * 185.99764 * 4 3 2 6 6 N 1.34773 * 119.99848 * 6.00284 * 4 3 2 7 7 C 1.46505 * 119.99861 * 184.14651 * 6 4 3 8 8 C 1.53001 * 109.47424 * 272.00255 * 7 6 4 9 9 C 1.50701 * 112.84539 * 313.88523 * 8 7 6 10 10 C 1.38236 * 119.99952 * 247.19859 * 9 8 7 11 11 C 1.38233 * 120.00050 * 179.79122 * 10 9 8 12 12 C 1.38239 * 119.99958 * 0.44050 * 11 10 9 13 13 C 1.38238 * 119.99976 * 359.81356 * 12 11 10 14 14 C 1.38237 * 119.99952 * 359.97438 * 13 12 11 15 15 C 1.53781 * 113.61517 * 182.69071 * 8 7 6 16 16 C 1.53781 * 87.07784 * 270.88182 * 15 8 7 17 17 H 1.09003 * 113.61578 * 89.12146 * 16 15 8 18 18 F 1.39904 * 113.61262 * 219.93271 * 16 15 8 19 19 C 1.53777 * 87.08480 * 334.56639 * 16 15 8 20 20 C 1.37871 * 107.52955 * 179.87915 * 3 2 1 21 21 C 1.39835 * 107.08985 * 0.37952 * 20 3 2 22 22 C 1.35451 * 107.86059 * 359.76368 * 21 20 3 23 23 C 1.50706 * 125.56222 * 179.97438 * 22 21 20 24 24 O 1.42897 * 109.47414 * 210.00093 * 23 22 21 25 25 Si 1.86303 * 109.46836 * 330.00085 * 23 22 21 26 26 H 1.09007 * 109.46755 * 276.18835 * 1 2 3 27 27 H 1.09003 * 109.47090 * 36.18796 * 1 2 3 28 28 H 1.09001 * 109.47431 * 156.19155 * 1 2 3 29 29 H 0.96993 * 120.00399 * 4.14658 * 6 4 3 30 30 H 1.09004 * 109.46547 * 32.00114 * 7 6 4 31 31 H 1.08993 * 109.47070 * 151.99693 * 7 6 4 32 32 H 1.08001 * 119.99634 * 0.02562 * 10 9 8 33 33 H 1.07997 * 120.00061 * 180.27834 * 11 10 9 34 34 H 1.07994 * 120.00110 * 179.83553 * 12 11 10 35 35 H 1.07997 * 120.00215 * 179.97438 * 13 12 11 36 36 H 1.08003 * 120.00061 * 179.97438 * 14 13 12 37 37 H 1.09005 * 113.61277 * 25.42916 * 15 8 7 38 38 H 1.08995 * 113.61249 * 156.33321 * 15 8 7 39 39 H 1.08998 * 113.61781 * 270.88774 * 19 16 15 40 40 H 1.08999 * 113.61318 * 139.98189 * 19 16 15 41 41 H 1.07999 * 126.45267 * 180.11523 * 20 3 2 42 42 H 1.08000 * 126.06908 * 179.76261 * 21 20 3 43 43 H 1.08997 * 109.47119 * 89.99727 * 23 22 21 44 44 H 0.96704 * 113.99916 * 59.99638 * 24 23 22 45 45 H 1.48506 * 109.99589 * 179.97438 * 25 23 22 46 46 H 1.48495 * 110.00093 * 301.31762 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2679 1.1181 0.0000 4 6 1.8125 2.5124 0.0005 5 8 2.6199 3.4162 -0.1097 6 7 0.4999 2.7925 0.1231 7 6 0.0352 4.1789 0.0326 8 6 0.0855 4.8253 1.4185 9 6 -0.4979 3.9471 2.4952 10 6 -1.6668 4.3190 3.1325 11 6 -2.2043 3.5113 4.1172 12 6 -1.5680 2.3362 4.4710 13 6 -0.3962 1.9669 3.8373 14 6 0.1390 2.7724 2.8496 15 6 -0.4461 6.2681 1.4450 16 6 0.9887 6.7190 1.1239 17 1 1.1997 6.7764 0.0561 18 9 1.3836 7.8677 1.8181 19 6 1.4624 5.4095 1.7761 20 6 3.5780 0.6886 0.0028 21 6 3.5521 -0.7095 -0.0044 22 6 2.2554 -1.1010 -0.0060 23 6 1.7707 -2.5279 -0.0137 24 8 0.5124 -2.6000 -0.6871 25 14 3.0110 -3.6002 -0.8985 26 1 -0.3633 0.1108 1.0218 27 1 -0.3633 0.8294 -0.6068 28 1 -0.3634 -0.9402 -0.4148 29 1 -0.1371 2.0762 0.2713 30 1 0.6783 4.7337 -0.6507 31 1 -0.9893 4.1952 -0.3389 32 1 -2.1622 5.2387 2.8584 33 1 -3.1200 3.7996 4.6120 34 1 -1.9864 1.7065 5.2421 35 1 0.1012 1.0490 4.1140 36 1 1.0547 2.4841 2.3548 37 1 -1.1601 6.4850 0.6504 38 1 -0.7945 6.5870 2.4273 39 1 1.6357 5.4936 2.8489 40 1 2.2891 4.9333 1.2489 41 1 4.4583 1.3142 0.0053 42 1 4.4132 -1.3614 -0.0081 43 1 1.6544 -2.8777 1.0121 44 1 0.5412 -2.3034 -1.6071 45 1 2.5448 -5.0102 -0.9124 46 1 3.2023 -3.1143 -2.2886 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13458982_10803936.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:26:07 Heat of formation + Delta-G solvation = 7.445279 kcal Electronic energy + Delta-G solvation = -31560.548086 eV Core-core repulsion = 27333.582580 eV Total energy + Delta-G solvation = -4226.965506 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.153 amu Computer time = 0.76 seconds Orbital eigenvalues (eV) -48.38260 -42.77601 -41.62216 -39.87965 -38.67409 -38.07978 -35.87699 -33.84737 -31.98584 -31.88336 -31.54521 -28.92301 -27.84108 -27.06523 -26.49023 -24.98704 -23.32769 -22.95576 -22.46404 -21.58563 -20.95188 -19.81376 -18.94507 -18.42915 -18.30532 -17.58848 -17.10084 -16.76785 -16.59130 -16.52124 -16.36206 -15.94735 -15.83321 -15.46553 -15.36560 -15.33086 -15.16879 -14.59852 -14.39393 -14.34721 -14.25161 -14.08749 -13.76916 -13.67291 -13.56954 -13.45869 -13.08135 -12.99238 -12.69966 -12.44379 -12.32422 -12.22553 -12.02187 -11.87109 -11.35298 -11.23774 -11.10606 -10.92580 -10.23253 -9.87129 -9.79359 -9.67612 -9.13893 -5.03643 0.31483 0.37047 0.42019 1.03622 1.52194 1.63144 1.68800 1.93361 2.01152 2.35473 2.77549 2.91012 3.19381 3.27614 3.36496 3.44866 3.54593 3.63761 3.70684 3.73493 3.89913 3.95115 4.03503 4.04658 4.17974 4.18937 4.25213 4.29011 4.35137 4.39826 4.49801 4.53763 4.59848 4.64098 4.66757 4.69565 4.91450 5.03395 5.04862 5.06148 5.12783 5.17203 5.25225 5.34103 5.52209 5.56280 5.62095 5.63542 5.90559 5.98982 6.01569 6.07138 6.34293 7.10412 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 N -0.413 5.413 3 C -0.062 4.062 4 C 0.591 3.409 5 O -0.520 6.520 6 N -0.734 5.734 7 C 0.138 3.862 8 C -0.060 4.060 9 C -0.062 4.062 10 C -0.116 4.116 11 C -0.117 4.117 12 C -0.121 4.121 13 C -0.121 4.121 14 C -0.111 4.111 15 C -0.149 4.149 16 C 0.066 3.934 17 H 0.110 0.890 18 F -0.207 7.207 19 C -0.153 4.153 20 C -0.098 4.098 21 C -0.200 4.200 22 C 0.019 3.981 23 C -0.056 4.056 24 O -0.532 6.532 25 Si 0.718 3.282 26 H 0.081 0.919 27 H 0.082 0.918 28 H 0.123 0.877 29 H 0.400 0.600 30 H 0.093 0.907 31 H 0.088 0.912 32 H 0.124 0.876 33 H 0.123 0.877 34 H 0.121 0.879 35 H 0.120 0.880 36 H 0.118 0.882 37 H 0.084 0.916 38 H 0.101 0.899 39 H 0.090 0.910 40 H 0.107 0.893 41 H 0.152 0.848 42 H 0.155 0.845 43 H 0.125 0.875 44 H 0.379 0.621 45 H -0.254 1.254 46 H -0.256 1.256 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.833 -4.367 -0.687 5.250 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.107 4.107 2 N -0.089 5.089 3 C -0.173 4.173 4 C 0.380 3.620 5 O -0.396 6.396 6 N -0.389 5.389 7 C 0.014 3.986 8 C -0.062 4.062 9 C -0.062 4.062 10 C -0.134 4.134 11 C -0.135 4.135 12 C -0.139 4.139 13 C -0.139 4.139 14 C -0.130 4.130 15 C -0.187 4.187 16 C 0.030 3.970 17 H 0.127 0.873 18 F -0.187 7.187 19 C -0.191 4.191 20 C -0.124 4.124 21 C -0.224 4.224 22 C -0.098 4.098 23 C -0.165 4.165 24 O -0.339 6.339 25 Si 0.616 3.384 26 H 0.099 0.901 27 H 0.100 0.900 28 H 0.141 0.859 29 H 0.240 0.760 30 H 0.112 0.888 31 H 0.106 0.894 32 H 0.142 0.858 33 H 0.141 0.859 34 H 0.139 0.861 35 H 0.138 0.862 36 H 0.136 0.864 37 H 0.103 0.897 38 H 0.119 0.881 39 H 0.109 0.891 40 H 0.126 0.874 41 H 0.170 0.830 42 H 0.172 0.828 43 H 0.143 0.857 44 H 0.227 0.773 45 H -0.179 1.179 46 H -0.180 1.180 Dipole moment (debyes) X Y Z Total from point charges -2.716 -4.389 -0.878 5.236 hybrid contribution -1.346 0.310 -0.280 1.409 sum -4.062 -4.080 -1.157 5.872 Atomic orbital electron populations 1.22783 0.77049 1.06728 1.04153 1.43861 1.06108 1.04884 1.54073 1.20463 0.91285 0.85991 1.19597 1.17063 0.82215 0.86719 0.76025 1.90800 1.53420 1.45763 1.49654 1.46416 1.08181 1.09788 1.74560 1.21270 1.00796 0.82004 0.94505 1.20991 0.97467 0.93215 0.94507 1.19414 0.95132 0.94970 0.96649 1.21107 0.95707 0.99917 0.96654 1.21182 1.00024 0.94789 0.97535 1.21200 0.95785 0.97031 0.99880 1.21182 0.96286 0.99905 0.96486 1.21085 0.99886 0.94439 0.97542 1.23752 0.96822 0.93976 1.04139 1.23082 0.95788 0.81531 0.96608 0.87250 1.92812 1.91982 1.52684 1.81252 1.23880 0.97742 0.94843 1.02608 1.21312 0.94731 0.94556 1.01798 1.20621 0.94963 0.95252 1.11578 1.21011 0.91061 0.88940 1.08782 1.24924 0.93071 0.94627 1.03869 1.86536 1.30036 1.88042 1.29289 0.94211 0.84929 0.77403 0.81831 0.90065 0.89963 0.85905 0.76020 0.88848 0.89411 0.85788 0.85939 0.86071 0.86243 0.86446 0.89727 0.88068 0.89132 0.87442 0.83010 0.82775 0.85707 0.77290 1.17867 1.18042 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.10 9.27 59.85 0.55 0.45 16 2 N -0.41 0.26 3.16 -115.61 -0.37 -0.11 16 3 C -0.06 -0.08 6.88 -81.98 -0.56 -0.65 16 4 C 0.59 1.06 6.47 -12.86 -0.08 0.98 16 5 O -0.52 -2.40 13.93 5.19 0.07 -2.33 16 6 N -0.73 0.67 3.00 -61.62 -0.18 0.48 16 7 C 0.14 -0.19 5.45 -4.04 -0.02 -0.21 16 8 C -0.06 0.03 0.96 -154.85 -0.15 -0.12 16 9 C -0.06 -0.01 4.79 -104.62 -0.50 -0.51 16 10 C -0.12 0.00 9.04 -39.58 -0.36 -0.36 16 11 C -0.12 0.00 10.05 -39.58 -0.40 -0.40 16 12 C -0.12 -0.01 10.05 -39.58 -0.40 -0.41 16 13 C -0.12 -0.04 10.05 -39.58 -0.40 -0.44 16 14 C -0.11 -0.08 8.15 -39.58 -0.32 -0.40 16 15 C -0.15 0.13 6.19 -25.92 -0.16 -0.03 16 16 C 0.07 0.07 5.32 -25.92 -0.14 -0.07 16 17 H 0.11 -0.03 7.68 -51.93 -0.40 -0.43 16 18 F -0.21 -0.86 17.41 2.25 0.04 -0.82 16 19 C -0.15 -0.25 6.93 -25.92 -0.18 -0.43 16 20 C -0.10 -0.13 10.66 -39.12 -0.42 -0.55 16 21 C -0.20 0.10 9.37 -39.98 -0.37 -0.27 16 22 C 0.02 -0.02 6.14 -81.95 -0.50 -0.52 16 23 C -0.06 0.13 2.99 36.01 0.11 0.24 16 24 O -0.53 1.07 9.88 -35.23 -0.35 0.72 16 25 Si 0.72 -1.85 31.10 -169.99 -5.29 -7.14 16 26 H 0.08 -0.27 8.07 -51.93 -0.42 -0.69 16 27 H 0.08 -0.33 6.02 -51.93 -0.31 -0.64 16 28 H 0.12 -0.44 4.87 -51.93 -0.25 -0.69 16 29 H 0.40 -0.94 4.40 -40.82 -0.18 -1.12 16 30 H 0.09 -0.06 6.76 -51.93 -0.35 -0.41 16 31 H 0.09 -0.30 8.14 -51.93 -0.42 -0.72 16 32 H 0.12 -0.16 6.48 -52.49 -0.34 -0.50 16 33 H 0.12 -0.18 8.06 -52.49 -0.42 -0.61 16 34 H 0.12 -0.16 8.06 -52.49 -0.42 -0.59 16 35 H 0.12 -0.09 8.06 -52.49 -0.42 -0.51 16 36 H 0.12 0.17 5.96 -52.48 -0.31 -0.15 16 37 H 0.08 -0.22 8.10 -51.93 -0.42 -0.64 16 38 H 0.10 -0.04 6.87 -51.93 -0.36 -0.40 16 39 H 0.09 0.24 8.10 -51.93 -0.42 -0.18 16 40 H 0.11 0.35 5.31 -51.93 -0.28 0.07 16 41 H 0.15 0.17 8.06 -52.49 -0.42 -0.26 16 42 H 0.15 -0.49 6.85 -52.49 -0.36 -0.85 16 43 H 0.13 -0.38 7.96 -51.93 -0.41 -0.79 16 44 H 0.38 -1.62 8.50 45.56 0.39 -1.23 16 45 H -0.25 -0.12 7.11 56.52 0.40 0.28 16 46 H -0.26 -0.05 7.11 56.52 0.40 0.35 16 LS Contribution 363.77 15.07 5.48 5.48 Total: 0.00 -7.46 363.77 -10.63 -18.10 By element: Atomic # 1 Polarization: -4.94 SS G_CDS: -5.74 Total: -10.68 kcal Atomic # 6 Polarization: 0.61 SS G_CDS: -4.30 Total: -3.69 kcal Atomic # 7 Polarization: 0.92 SS G_CDS: -0.55 Total: 0.37 kcal Atomic # 8 Polarization: -1.34 SS G_CDS: -0.28 Total: -1.61 kcal Atomic # 9 Polarization: -0.86 SS G_CDS: 0.04 Total: -0.82 kcal Atomic # 14 Polarization: -1.85 SS G_CDS: -5.29 Total: -7.14 kcal Total LS contribution 5.48 Total: 5.48 kcal Total: -7.46 -10.63 -18.10 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13458982_10803936.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 25.542 kcal (2) G-P(sol) polarization free energy of solvation -7.463 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 18.079 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.634 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.097 kcal (6) G-S(sol) free energy of system = (1) + (5) 7.445 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.76 seconds