Wall clock time and date at job start Sat Mar 6 2021 21:26:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42894 * 1 3 3 Si 1.86306 * 109.47188 * 2 1 4 4 C 1.50700 * 109.47125 * 120.00090 * 2 1 3 5 5 C 1.36448 * 120.29729 * 119.99979 * 4 2 1 6 6 C 1.40093 * 119.25383 * 179.97438 * 5 4 2 7 7 C 1.40853 * 132.86453 * 180.02562 * 6 5 4 8 8 C 1.46574 * 126.57870 * 359.97438 * 7 6 5 9 9 O 1.21720 * 119.99928 * 359.71464 * 8 7 6 10 10 N 1.34775 * 119.99735 * 179.72031 * 8 7 6 11 11 C 1.46502 * 119.99787 * 180.02562 * 10 8 7 12 12 C 1.52997 * 109.47142 * 184.61035 * 11 10 8 13 13 C 1.50703 * 112.84658 * 62.70656 * 12 11 10 14 14 C 1.38236 * 120.00047 * 55.19702 * 13 12 11 15 15 C 1.38236 * 119.99879 * 179.72518 * 14 13 12 16 16 C 1.38235 * 119.99979 * 0.27729 * 15 14 13 17 17 C 1.38228 * 120.00213 * 359.95483 * 16 15 14 18 18 C 1.38234 * 119.99940 * 235.40997 * 13 12 11 19 19 C 1.53784 * 113.62000 * 291.51103 * 12 11 10 20 20 C 1.53783 * 87.07934 * 270.79843 * 19 12 11 21 21 H 1.09000 * 113.61572 * 89.10973 * 20 19 12 22 22 F 1.39896 * 113.61406 * 219.93065 * 20 19 12 23 23 C 1.53784 * 87.08325 * 334.56440 * 20 19 12 24 24 C 1.40553 * 106.84319 * 179.73584 * 7 6 5 25 25 N 1.30742 * 108.73941 * 0.25769 * 24 7 6 26 26 N 1.36576 * 120.23332 * 0.17567 * 6 5 4 27 27 C 1.36240 * 120.08058 * 0.02562 * 26 6 5 28 28 C 1.35197 * 120.70375 * 359.59280 * 27 26 6 29 29 H 0.96699 * 114.00143 * 60.00132 * 1 2 3 30 30 H 1.08995 * 109.47077 * 239.99904 * 2 1 3 31 31 H 1.48499 * 109.99699 * 59.99909 * 3 2 1 32 32 H 1.48500 * 109.99714 * 181.31839 * 3 2 1 33 33 H 1.07998 * 120.37361 * 0.02562 * 5 4 2 34 34 H 0.97000 * 120.00202 * 359.97438 * 10 8 7 35 35 H 1.09004 * 109.46948 * 64.61365 * 11 10 8 36 36 H 1.09002 * 109.47112 * 304.61317 * 11 10 8 37 37 H 1.07997 * 119.99845 * 359.97438 * 14 13 12 38 38 H 1.08003 * 119.99875 * 180.25417 * 15 14 13 39 39 H 1.08002 * 120.00015 * 179.97438 * 16 15 14 40 40 H 1.08000 * 120.00565 * 179.97438 * 17 16 15 41 41 H 1.07997 * 120.00152 * 0.04609 * 18 13 12 42 42 H 1.09003 * 113.60848 * 25.34259 * 19 12 11 43 43 H 1.08993 * 113.61600 * 156.24587 * 19 12 11 44 44 H 1.08997 * 113.61476 * 270.88631 * 23 20 19 45 45 H 1.08998 * 113.61698 * 139.97793 * 23 20 19 46 46 H 1.07999 * 125.63325 * 180.29338 * 24 7 6 47 47 H 1.07993 * 119.65215 * 180.27221 * 27 26 6 48 48 H 1.07997 * 119.83961 * 180.21470 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.7161 -1.8203 1.1123 6 6 3.1714 -2.4633 2.2707 7 6 3.9759 -3.6000 2.4823 8 6 4.5763 -4.4497 1.4499 9 8 4.3921 -4.1997 0.2730 10 7 5.3324 -5.5078 1.8038 11 6 5.9330 -6.3567 0.7719 12 6 6.6386 -7.5420 1.4337 13 6 5.6930 -8.4358 2.1941 14 6 4.5933 -8.9797 1.5570 15 6 3.7291 -9.8041 2.2530 16 6 3.9613 -10.0798 3.5875 17 6 5.0582 -9.5321 4.2258 18 6 5.9228 -8.7080 3.5297 19 6 7.8896 -7.1451 2.2352 20 6 8.6866 -7.3317 0.9334 21 1 8.7446 -6.4299 0.3238 22 9 9.9316 -7.9415 1.1210 23 6 7.5822 -8.3053 0.4892 24 6 4.0970 -3.7599 3.8735 25 7 3.4221 -2.8096 4.4658 26 7 2.8289 -1.9842 3.5029 27 6 2.0414 -0.8777 3.6107 28 6 1.5968 -0.2367 2.5065 29 1 -0.3933 0.4417 -0.7650 30 1 1.7923 -0.5138 -0.8899 31 1 1.5614 2.4679 1.2085 32 1 3.5346 1.7702 -0.0321 33 1 2.9840 -2.1984 0.1368 34 1 5.4794 -5.7068 2.7417 35 1 6.6568 -5.7762 0.1999 36 1 5.1533 -6.7244 0.1047 37 1 4.4117 -8.7639 0.5145 38 1 2.8722 -10.2324 1.7542 39 1 3.2858 -10.7236 4.1314 40 1 5.2394 -9.7472 5.2685 41 1 6.7795 -8.2797 4.0285 42 1 7.8709 -6.1152 2.5920 43 1 8.1534 -7.8595 3.0150 44 1 7.7621 -9.3369 0.7916 45 1 7.3154 -8.2121 -0.5635 46 1 4.6558 -4.5387 4.3710 47 1 1.7784 -0.5023 4.5885 48 1 0.9761 0.6413 2.6081 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13458982_11618758.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:26:11 Heat of formation + Delta-G solvation = 48.445614 kcal Electronic energy + Delta-G solvation = -34615.035560 eV Core-core repulsion = 29939.743629 eV Total energy + Delta-G solvation = -4675.291931 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 382.148 amu Computer time = 1.16 seconds Orbital eigenvalues (eV) -48.52612 -43.30767 -41.63862 -40.02472 -39.18992 -38.75844 -37.33751 -35.18709 -34.26875 -32.19549 -32.11822 -31.90903 -30.63826 -28.53954 -27.31847 -27.01128 -25.32471 -24.72666 -23.57187 -23.27604 -22.87808 -22.51612 -21.16574 -20.02633 -19.12811 -18.58570 -18.41182 -17.97821 -17.63769 -17.38180 -16.93152 -16.87037 -16.65801 -16.59632 -16.06781 -15.90588 -15.79763 -15.59975 -15.55354 -15.52149 -14.97774 -14.63038 -14.53973 -14.40210 -14.31174 -14.26970 -13.92818 -13.68312 -13.56677 -13.40890 -13.34738 -13.03117 -12.62982 -12.55345 -12.51786 -12.24619 -12.10348 -11.94649 -11.79575 -11.60548 -11.40362 -11.35640 -10.81583 -10.78708 -10.29869 -10.05170 -9.87519 -9.69018 -8.78430 -5.17405 -0.58800 -0.14509 0.35729 0.44536 0.98341 1.05033 1.12201 1.51527 1.84586 2.00726 2.16899 2.58000 2.77053 2.95546 3.05482 3.09068 3.18913 3.33177 3.39604 3.48944 3.56310 3.59480 3.66559 3.78837 3.82837 3.96661 4.01188 4.04332 4.11935 4.14399 4.18936 4.22892 4.32129 4.44054 4.50054 4.52726 4.54194 4.59220 4.60698 4.66349 4.71391 4.77207 4.88848 5.02414 5.05965 5.07136 5.12223 5.18168 5.23573 5.44208 5.52297 5.58737 5.59815 5.62721 6.02637 6.29573 6.44417 6.57650 7.36404 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.073 4.073 3 Si 0.703 3.297 4 C -0.030 4.030 5 C -0.093 4.093 6 C 0.168 3.832 7 C -0.314 4.314 8 C 0.603 3.397 9 O -0.550 6.550 10 N -0.724 5.724 11 C 0.149 3.851 12 C -0.055 4.055 13 C -0.068 4.068 14 C -0.107 4.107 15 C -0.116 4.116 16 C -0.120 4.120 17 C -0.116 4.116 18 C -0.120 4.120 19 C -0.156 4.156 20 C 0.065 3.935 21 H 0.112 0.888 22 F -0.204 7.204 23 C -0.139 4.139 24 C 0.120 3.880 25 N -0.311 5.311 26 N -0.265 5.265 27 C 0.114 3.886 28 C -0.146 4.146 29 H 0.388 0.612 30 H 0.082 0.918 31 H -0.249 1.249 32 H -0.256 1.256 33 H 0.165 0.835 34 H 0.399 0.601 35 H 0.074 0.926 36 H 0.079 0.921 37 H 0.121 0.879 38 H 0.122 0.878 39 H 0.122 0.878 40 H 0.123 0.877 41 H 0.125 0.875 42 H 0.086 0.914 43 H 0.105 0.895 44 H 0.102 0.898 45 H 0.088 0.912 46 H 0.198 0.802 47 H 0.178 0.822 48 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.095 2.562 -1.337 3.570 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.349 6.349 2 C -0.182 4.182 3 Si 0.602 3.398 4 C -0.036 4.036 5 C -0.113 4.113 6 C 0.047 3.953 7 C -0.329 4.329 8 C 0.392 3.608 9 O -0.429 6.429 10 N -0.375 5.375 11 C 0.026 3.974 12 C -0.055 4.055 13 C -0.068 4.068 14 C -0.125 4.125 15 C -0.134 4.134 16 C -0.138 4.138 17 C -0.134 4.134 18 C -0.138 4.138 19 C -0.194 4.194 20 C 0.029 3.971 21 H 0.130 0.870 22 F -0.185 7.185 23 C -0.177 4.177 24 C -0.061 4.061 25 N -0.131 5.131 26 N -0.029 5.029 27 C -0.012 4.012 28 C -0.167 4.167 29 H 0.236 0.764 30 H 0.100 0.900 31 H -0.173 1.173 32 H -0.180 1.180 33 H 0.182 0.818 34 H 0.234 0.766 35 H 0.092 0.908 36 H 0.097 0.903 37 H 0.139 0.861 38 H 0.140 0.860 39 H 0.140 0.860 40 H 0.141 0.859 41 H 0.143 0.857 42 H 0.104 0.896 43 H 0.123 0.877 44 H 0.121 0.879 45 H 0.106 0.894 46 H 0.214 0.786 47 H 0.195 0.805 48 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges -1.901 3.405 0.039 3.900 hybrid contribution 0.346 -1.178 0.079 1.230 sum -1.554 2.227 0.118 2.719 Atomic orbital electron populations 1.86474 1.16440 1.81979 1.50030 1.24694 0.86362 1.10571 0.96605 0.95326 0.81353 0.75553 0.87582 1.19445 0.95932 0.93798 0.94407 1.20699 0.98298 0.93950 0.98323 1.19224 0.95752 0.94235 0.86093 1.19579 1.16126 1.03639 0.93570 1.16766 0.77336 0.79397 0.87268 1.90784 1.61624 1.71963 1.18499 1.45538 1.52743 1.29137 1.10117 1.21087 0.97317 0.89082 0.89951 1.20767 0.92779 0.94876 0.97089 1.19366 0.95513 0.98081 0.93862 1.20971 0.94240 0.97278 1.00028 1.21186 0.99372 0.98142 0.94674 1.21225 0.97741 0.99855 0.94984 1.21175 0.94883 0.97327 1.00048 1.21122 0.99804 0.99084 0.93775 1.23826 0.94137 1.03846 0.97560 1.23096 0.78459 0.96781 0.98746 0.87047 1.92827 1.44775 1.84768 1.96121 1.23641 0.93569 0.99976 1.00515 1.24049 0.94422 0.95649 0.91970 1.77639 1.18161 1.06612 1.10737 1.46091 1.31843 1.19174 1.05809 1.21584 0.92391 0.85344 1.01880 1.20850 1.02918 1.02497 0.90450 0.76402 0.89952 1.17263 1.17996 0.81752 0.76640 0.90773 0.90250 0.86089 0.85964 0.86042 0.85917 0.85671 0.89571 0.87717 0.87922 0.89350 0.78562 0.80457 0.82058 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.73 12.76 -35.23 -0.45 0.28 16 2 C -0.07 0.09 2.81 36.01 0.10 0.19 16 3 Si 0.70 -1.66 31.97 -169.99 -5.43 -7.09 16 4 C -0.03 -0.04 4.53 -104.55 -0.47 -0.52 16 5 C -0.09 -0.27 9.35 -39.53 -0.37 -0.64 16 6 C 0.17 0.66 6.76 -84.07 -0.57 0.09 16 7 C -0.31 -1.01 6.17 -104.68 -0.65 -1.66 16 8 C 0.60 1.97 7.78 -12.90 -0.10 1.87 16 9 O -0.55 -3.41 15.70 5.17 0.08 -3.33 16 10 N -0.72 0.00 5.24 -61.65 -0.32 -0.33 16 11 C 0.15 -0.10 4.73 -4.04 -0.02 -0.12 16 12 C -0.05 0.10 0.68 -154.84 -0.10 0.00 16 13 C -0.07 0.05 4.60 -104.62 -0.48 -0.43 16 14 C -0.11 -0.01 9.31 -39.58 -0.37 -0.38 16 15 C -0.12 -0.04 10.05 -39.58 -0.40 -0.43 16 16 C -0.12 -0.01 10.05 -39.59 -0.40 -0.41 16 17 C -0.12 0.04 10.05 -39.58 -0.40 -0.36 16 18 C -0.12 0.10 9.14 -39.58 -0.36 -0.26 16 19 C -0.16 0.33 6.30 -25.92 -0.16 0.17 16 20 C 0.07 -0.07 5.32 -25.92 -0.14 -0.20 16 21 H 0.11 -0.25 7.60 -51.93 -0.39 -0.65 16 22 F -0.20 -0.46 17.41 2.25 0.04 -0.42 16 23 C -0.14 0.22 7.12 -25.91 -0.18 0.04 16 24 C 0.12 0.19 11.44 -17.14 -0.20 -0.01 16 25 N -0.31 -1.12 12.57 30.75 0.39 -0.73 16 26 N -0.26 -0.90 3.86 -10.55 -0.04 -0.94 16 27 C 0.11 0.11 11.18 -16.68 -0.19 -0.08 16 28 C -0.15 -0.08 8.67 -39.94 -0.35 -0.42 16 29 H 0.39 -2.44 8.74 45.56 0.40 -2.05 16 30 H 0.08 -0.20 7.71 -51.93 -0.40 -0.60 16 31 H -0.25 0.02 7.07 56.52 0.40 0.42 16 32 H -0.26 -0.26 7.11 56.52 0.40 0.14 16 33 H 0.17 0.46 7.01 -52.49 -0.37 0.09 16 34 H 0.40 -0.75 7.16 -40.82 -0.29 -1.04 16 35 H 0.07 -0.05 7.31 -51.93 -0.38 -0.43 16 36 H 0.08 0.02 7.37 -51.93 -0.38 -0.36 16 37 H 0.12 -0.07 7.48 -52.49 -0.39 -0.47 16 38 H 0.12 -0.11 8.06 -52.48 -0.42 -0.53 16 39 H 0.12 -0.14 8.06 -52.49 -0.42 -0.57 16 40 H 0.12 -0.22 8.06 -52.49 -0.42 -0.64 16 41 H 0.13 -0.30 5.95 -52.49 -0.31 -0.61 16 42 H 0.09 -0.24 8.04 -51.93 -0.42 -0.66 16 43 H 0.10 -0.22 6.23 -51.93 -0.32 -0.54 16 44 H 0.10 -0.09 8.09 -51.93 -0.42 -0.51 16 45 H 0.09 -0.21 8.10 -51.93 -0.42 -0.64 16 46 H 0.20 -0.49 7.46 -52.49 -0.39 -0.88 16 47 H 0.18 -0.35 8.06 -52.49 -0.42 -0.77 16 48 H 0.16 -0.22 7.52 -52.49 -0.39 -0.61 16 LS Contribution 403.69 15.07 6.08 6.08 Total: 0.00 -10.71 403.69 -11.24 -21.95 By element: Atomic # 1 Polarization: -6.13 SS G_CDS: -5.78 Total: -11.91 kcal Atomic # 6 Polarization: 2.24 SS G_CDS: -5.80 Total: -3.56 kcal Atomic # 7 Polarization: -2.02 SS G_CDS: 0.02 Total: -2.00 kcal Atomic # 8 Polarization: -2.69 SS G_CDS: -0.37 Total: -3.05 kcal Atomic # 9 Polarization: -0.46 SS G_CDS: 0.04 Total: -0.42 kcal Atomic # 14 Polarization: -1.66 SS G_CDS: -5.43 Total: -7.09 kcal Total LS contribution 6.08 Total: 6.08 kcal Total: -10.71 -11.24 -21.95 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13458982_11618758.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 70.397 kcal (2) G-P(sol) polarization free energy of solvation -10.713 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 59.684 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.238 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.951 kcal (6) G-S(sol) free energy of system = (1) + (5) 48.446 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.16 seconds