Wall clock time and date at job start Sat Mar 6 2021 21:26:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.35457 * 125.55920 * 2 1 4 4 C 1.50696 * 126.07106 * 359.97438 * 3 2 1 5 5 O 1.42896 * 109.46970 * 111.72285 * 4 3 2 6 6 Si 1.86296 * 109.47244 * 231.72686 * 4 3 2 7 7 C 1.39837 * 107.85782 * 179.72154 * 3 2 1 8 8 C 1.50707 * 126.45062 * 180.26320 * 7 3 2 9 9 C 1.37866 * 107.08785 * 0.41481 * 7 3 2 10 10 C 1.46685 * 126.23241 * 179.84969 * 9 7 3 11 11 O 1.21692 * 120.00002 * 359.71625 * 10 9 7 12 12 N 1.34777 * 119.99861 * 179.71024 * 10 9 7 13 13 C 1.46494 * 119.99631 * 179.97438 * 12 10 9 14 14 C 1.53002 * 109.47218 * 184.78664 * 13 12 10 15 15 C 1.50698 * 112.84675 * 306.02361 * 14 13 12 16 16 C 1.38240 * 119.99945 * 111.68138 * 15 14 13 17 17 C 1.38240 * 119.99801 * 179.78627 * 16 15 14 18 18 C 1.38233 * 119.99901 * 0.44693 * 17 16 15 19 19 C 1.38232 * 120.00328 * 359.80736 * 18 17 16 20 20 C 1.38235 * 120.00006 * 359.97438 * 19 18 17 21 21 C 1.53778 * 113.61825 * 174.82710 * 14 13 12 22 22 C 1.53780 * 87.07931 * 270.88277 * 21 14 13 23 23 H 1.09001 * 113.61677 * 89.11865 * 22 21 14 24 24 F 1.39898 * 113.61303 * 220.01571 * 22 21 14 25 25 C 1.53778 * 113.61309 * 77.32477 * 14 13 12 26 26 N 1.35532 * 125.56725 * 179.97438 * 2 1 3 27 27 H 1.09004 * 109.47461 * 265.33785 * 1 2 3 28 28 H 1.09000 * 109.47980 * 25.33948 * 1 2 3 29 29 H 1.08999 * 109.47289 * 145.34160 * 1 2 3 30 30 H 1.09005 * 109.47117 * 351.72401 * 4 3 2 31 31 H 0.96693 * 113.99822 * 60.00497 * 5 4 3 32 32 H 1.48500 * 110.00110 * 63.69084 * 6 4 3 33 33 H 1.48497 * 109.99939 * 185.01016 * 6 4 3 34 34 H 1.09002 * 109.46771 * 270.19656 * 8 7 3 35 35 H 1.08988 * 109.47574 * 30.20353 * 8 7 3 36 36 H 1.09005 * 109.46434 * 150.20521 * 8 7 3 37 37 H 0.96993 * 120.00143 * 0.02562 * 12 10 9 38 38 H 1.09005 * 109.47266 * 64.78745 * 13 12 10 39 39 H 1.08998 * 109.47462 * 304.78471 * 13 12 10 40 40 H 1.08000 * 120.00077 * 0.02562 * 16 15 14 41 41 H 1.08002 * 119.99718 * 180.27729 * 17 16 15 42 42 H 1.08003 * 119.99501 * 179.83514 * 18 17 16 43 43 H 1.08002 * 120.00151 * 180.02562 * 19 18 17 44 44 H 1.07997 * 120.00236 * 180.02562 * 20 19 18 45 45 H 1.09001 * 113.60980 * 25.42895 * 21 14 13 46 46 H 1.08996 * 113.61309 * 156.33599 * 21 14 13 47 47 H 1.09007 * 113.61398 * 203.66875 * 25 14 13 48 48 H 1.08997 * 113.61948 * 334.57391 * 25 14 13 49 49 H 0.97005 * 125.67473 * 0.02562 * 26 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2947 1.1020 0.0000 4 6 1.8198 2.5321 -0.0005 5 8 2.1425 3.1416 1.2510 6 14 2.6571 3.4640 -1.3794 7 6 3.6269 0.6768 0.0065 8 6 4.8484 1.5594 0.0144 9 6 3.6121 -0.7018 0.0008 10 6 4.7860 -1.5814 0.0013 11 8 5.9049 -1.1029 0.0020 12 7 4.6253 -2.9195 0.0012 13 6 5.7977 -3.7979 0.0011 14 6 5.3440 -5.2542 -0.1194 15 6 4.3352 -5.6416 0.9310 16 6 3.0297 -5.9149 0.5680 17 6 2.1054 -6.2746 1.5311 18 6 2.4845 -6.3519 2.8581 19 6 3.7888 -6.0735 3.2218 20 6 4.7141 -5.7182 2.2583 21 6 6.5059 -6.2523 -0.2555 22 6 6.4067 -6.0398 -1.7753 23 1 7.0206 -5.2172 -2.1422 24 9 6.5706 -7.2145 -2.5172 25 6 4.9353 -5.6559 -1.5464 26 7 2.2953 -1.1025 0.0005 27 1 -0.3634 -0.0835 1.0243 28 1 -0.3635 0.9287 -0.4398 29 1 -0.3634 -0.8453 -0.5844 30 1 0.7402 2.5564 -0.1489 31 1 3.0887 3.1553 1.4494 32 1 2.2587 2.8952 -2.6920 33 1 2.2905 4.9017 -1.3165 34 1 5.1463 1.7766 -1.0114 35 1 4.6201 2.4912 0.5315 36 1 5.6624 1.0484 0.5286 37 1 3.7335 -3.3009 0.0003 38 1 6.3510 -3.6656 0.9310 39 1 6.4401 -3.5466 -0.8428 40 1 2.7327 -5.8512 -0.4684 41 1 1.0865 -6.4925 1.2469 42 1 1.7617 -6.6303 3.6108 43 1 4.0850 -6.1343 4.2586 44 1 5.7332 -5.5010 2.5423 45 1 7.4412 -5.8948 0.1752 46 1 6.2519 -7.2637 0.0614 47 1 4.2519 -6.5044 -1.5824 48 1 4.6027 -4.8171 -2.1579 49 1 1.9834 -2.0210 0.0006 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13458982_12297754.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:26:14 Heat of formation + Delta-G solvation = -27.048998 kcal Electronic energy + Delta-G solvation = -32760.868954 eV Core-core repulsion = 28376.870045 eV Total energy + Delta-G solvation = -4383.998909 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.168 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -48.59039 -42.69017 -41.69750 -39.97132 -38.90305 -37.69175 -35.52266 -33.75595 -33.02080 -32.18418 -32.06568 -29.34562 -29.17601 -27.39573 -27.03959 -26.19932 -24.99776 -23.43692 -22.74884 -22.32638 -20.91448 -20.55497 -19.91877 -19.17116 -18.52172 -17.66957 -17.61666 -16.98611 -16.83671 -16.63800 -16.51061 -16.22571 -15.92828 -15.67100 -15.61024 -15.40702 -15.18827 -14.92691 -14.62325 -14.49510 -14.44602 -14.28880 -14.08581 -13.90686 -13.77330 -13.74548 -13.68485 -13.47882 -13.24994 -13.16731 -12.70806 -12.62812 -12.60619 -12.38614 -12.16718 -11.97891 -11.90662 -11.50592 -11.44496 -10.96560 -10.47435 -10.26297 -10.03099 -9.84628 -9.54738 -8.99287 -4.83695 0.20410 0.28730 0.40578 1.28121 1.60217 1.83250 1.89997 1.98388 2.13084 2.35770 2.62741 2.94198 3.05574 3.23913 3.34966 3.43616 3.63650 3.71130 3.72638 3.78003 3.88123 3.90470 3.97968 4.01464 4.04976 4.07815 4.28661 4.33840 4.38516 4.40980 4.44777 4.45825 4.47722 4.49941 4.53760 4.58654 4.64405 4.74642 4.78089 4.88634 4.91402 4.92509 4.99814 5.09441 5.13286 5.20625 5.37021 5.38419 5.43625 5.45231 5.69339 5.87463 5.90781 6.24597 6.41567 6.70737 7.11552 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.096 4.096 2 C 0.081 3.919 3 C -0.208 4.208 4 C -0.028 4.028 5 O -0.542 6.542 6 Si 0.675 3.325 7 C -0.057 4.057 8 C -0.099 4.099 9 C -0.060 4.060 10 C 0.592 3.408 11 O -0.522 6.522 12 N -0.729 5.729 13 C 0.148 3.852 14 C -0.056 4.056 15 C -0.070 4.070 16 C -0.124 4.124 17 C -0.117 4.117 18 C -0.119 4.119 19 C -0.114 4.114 20 C -0.107 4.107 21 C -0.140 4.140 22 C 0.065 3.935 23 H 0.113 0.887 24 F -0.204 7.204 25 C -0.153 4.153 26 N -0.537 5.537 27 H 0.081 0.919 28 H 0.085 0.915 29 H 0.070 0.930 30 H 0.109 0.891 31 H 0.375 0.625 32 H -0.258 1.258 33 H -0.253 1.253 34 H 0.079 0.921 35 H 0.065 0.935 36 H 0.091 0.909 37 H 0.395 0.605 38 H 0.078 0.922 39 H 0.081 0.919 40 H 0.123 0.877 41 H 0.123 0.877 42 H 0.123 0.877 43 H 0.124 0.876 44 H 0.123 0.877 45 H 0.089 0.911 46 H 0.103 0.897 47 H 0.102 0.898 48 H 0.084 0.916 49 H 0.414 0.586 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.735 -2.537 0.881 3.197 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C -0.038 4.038 3 C -0.214 4.214 4 C -0.140 4.140 5 O -0.348 6.348 6 Si 0.577 3.423 7 C -0.066 4.066 8 C -0.155 4.155 9 C -0.171 4.171 10 C 0.381 3.619 11 O -0.398 6.398 12 N -0.381 5.381 13 C 0.025 3.975 14 C -0.057 4.057 15 C -0.070 4.070 16 C -0.142 4.142 17 C -0.135 4.135 18 C -0.137 4.137 19 C -0.132 4.132 20 C -0.125 4.125 21 C -0.178 4.178 22 C 0.029 3.971 23 H 0.131 0.869 24 F -0.184 7.184 25 C -0.191 4.191 26 N -0.134 5.134 27 H 0.099 0.901 28 H 0.104 0.896 29 H 0.089 0.911 30 H 0.126 0.874 31 H 0.223 0.777 32 H -0.182 1.182 33 H -0.177 1.177 34 H 0.097 0.903 35 H 0.084 0.916 36 H 0.109 0.891 37 H 0.229 0.771 38 H 0.096 0.904 39 H 0.099 0.901 40 H 0.141 0.859 41 H 0.141 0.859 42 H 0.141 0.859 43 H 0.142 0.858 44 H 0.141 0.859 45 H 0.107 0.893 46 H 0.121 0.879 47 H 0.121 0.879 48 H 0.103 0.897 49 H 0.252 0.748 Dipole moment (debyes) X Y Z Total from point charges -1.636 -1.825 0.153 2.456 hybrid contribution -1.263 -1.348 0.271 1.867 sum -2.898 -3.174 0.424 4.319 Atomic orbital electron populations 1.20497 0.87493 1.03910 1.03460 1.20298 0.93562 0.85579 1.04333 1.19491 0.92593 0.95024 1.14338 1.24292 1.03320 0.91424 0.94972 1.86496 1.29847 1.80835 1.37626 0.94625 0.91904 0.78907 0.76904 1.19737 0.94571 0.91159 1.01097 1.20432 0.94707 0.97329 1.03066 1.19992 0.82720 0.93928 1.20483 1.16971 0.87598 0.81035 0.76345 1.90840 1.24027 1.74907 1.50002 1.45765 1.09848 1.05747 1.76747 1.21134 0.87581 0.85416 1.03388 1.20787 0.96133 0.94646 0.94086 1.19405 0.93694 1.00337 0.93581 1.21091 0.92747 1.00704 0.99646 1.21186 0.99648 0.99505 0.93135 1.21248 0.96428 0.99611 0.96412 1.21220 0.93452 0.98845 0.99675 1.20993 0.99860 0.99399 0.92203 1.23653 0.98459 1.00498 0.95155 1.23094 0.98095 0.85195 0.90675 0.86933 1.92831 1.96582 1.50176 1.78826 1.23788 0.97046 1.03098 0.95159 1.41815 1.05452 1.08292 1.57815 0.90076 0.89646 0.91108 0.87406 0.77701 1.18245 1.17717 0.90267 0.91607 0.89064 0.77123 0.90395 0.90066 0.85880 0.85863 0.85911 0.85791 0.85930 0.89254 0.87873 0.87919 0.89697 0.74844 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.23 10.19 36.00 0.37 0.59 16 2 C 0.08 -0.01 7.13 -81.95 -0.58 -0.59 16 3 C -0.21 -0.21 4.71 -105.02 -0.50 -0.71 16 4 C -0.03 -0.02 2.85 36.00 0.10 0.08 16 5 O -0.54 -0.85 12.88 -35.23 -0.45 -1.30 16 6 Si 0.67 0.37 29.57 -169.99 -5.03 -4.65 16 7 C -0.06 -0.07 5.83 -104.16 -0.61 -0.68 16 8 C -0.10 0.02 7.97 36.01 0.29 0.31 16 9 C -0.06 -0.07 7.06 -81.98 -0.58 -0.65 16 10 C 0.59 0.93 7.79 -12.85 -0.10 0.83 16 11 O -0.52 -2.29 14.80 5.20 0.08 -2.21 16 12 N -0.73 0.91 5.36 -61.62 -0.33 0.58 16 13 C 0.15 -0.26 4.88 -4.04 -0.02 -0.28 16 14 C -0.06 0.15 0.75 -154.85 -0.12 0.04 16 15 C -0.07 0.14 4.02 -104.62 -0.42 -0.28 16 16 C -0.12 0.27 8.69 -39.58 -0.34 -0.07 16 17 C -0.12 0.21 10.05 -39.58 -0.40 -0.19 16 18 C -0.12 0.15 10.05 -39.59 -0.40 -0.25 16 19 C -0.11 0.12 10.05 -39.58 -0.40 -0.28 16 20 C -0.11 0.13 9.47 -39.58 -0.37 -0.24 16 21 C -0.14 0.33 6.97 -25.92 -0.18 0.15 16 22 C 0.07 -0.10 5.32 -25.92 -0.14 -0.24 16 23 H 0.11 -0.32 7.61 -51.93 -0.40 -0.72 16 24 F -0.20 -0.37 17.41 2.25 0.04 -0.33 16 25 C -0.15 0.40 6.18 -25.92 -0.16 0.24 16 26 N -0.54 0.55 5.99 -5.70 -0.03 0.52 16 27 H 0.08 -0.21 8.14 -51.93 -0.42 -0.63 16 28 H 0.08 -0.21 6.80 -51.93 -0.35 -0.57 16 29 H 0.07 -0.27 8.14 -51.93 -0.42 -0.69 16 30 H 0.11 0.04 6.43 -51.93 -0.33 -0.29 16 31 H 0.37 -0.58 6.89 45.56 0.31 -0.27 16 32 H -0.26 -0.82 7.11 56.52 0.40 -0.42 16 33 H -0.25 -0.80 7.11 56.52 0.40 -0.40 16 34 H 0.08 -0.08 7.64 -51.93 -0.40 -0.47 16 35 H 0.07 -0.17 5.31 -51.94 -0.28 -0.45 16 36 H 0.09 0.12 6.49 -51.93 -0.34 -0.22 16 37 H 0.39 -1.12 6.66 -40.82 -0.27 -1.39 16 38 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 39 H 0.08 -0.13 7.31 -51.93 -0.38 -0.50 16 40 H 0.12 -0.44 6.55 -52.49 -0.34 -0.79 16 41 H 0.12 -0.40 8.06 -52.49 -0.42 -0.82 16 42 H 0.12 -0.30 8.06 -52.48 -0.42 -0.72 16 43 H 0.12 -0.27 8.06 -52.49 -0.42 -0.69 16 44 H 0.12 -0.25 8.06 -52.49 -0.42 -0.67 16 45 H 0.09 -0.29 8.10 -51.93 -0.42 -0.71 16 46 H 0.10 -0.17 8.09 -51.93 -0.42 -0.59 16 47 H 0.10 -0.24 6.95 -51.92 -0.36 -0.60 16 48 H 0.08 -0.26 8.10 -51.93 -0.42 -0.68 16 49 H 0.41 -1.54 8.19 -40.82 -0.33 -1.88 16 LS Contribution 393.93 15.07 5.94 5.94 Total: 0.00 -8.13 393.93 -11.23 -19.36 By element: Atomic # 1 Polarization: -8.80 SS G_CDS: -6.89 Total: -15.68 kcal Atomic # 6 Polarization: 2.34 SS G_CDS: -4.55 Total: -2.22 kcal Atomic # 7 Polarization: 1.46 SS G_CDS: -0.36 Total: 1.10 kcal Atomic # 8 Polarization: -3.14 SS G_CDS: -0.38 Total: -3.51 kcal Atomic # 9 Polarization: -0.37 SS G_CDS: 0.04 Total: -0.33 kcal Atomic # 14 Polarization: 0.37 SS G_CDS: -5.03 Total: -4.65 kcal Total LS contribution 5.94 Total: 5.94 kcal Total: -8.13 -11.23 -19.36 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13458982_12297754.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -7.686 kcal (2) G-P(sol) polarization free energy of solvation -8.130 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -15.816 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.233 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.363 kcal (6) G-S(sol) free energy of system = (1) + (5) -27.049 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds