Wall clock time and date at job start Sat Mar 6 2021 21:26:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.35457 * 125.55920 * 2 1 4 4 C 1.50696 * 126.07106 * 359.97438 * 3 2 1 5 5 O 1.42896 * 109.46970 * 111.72285 * 4 3 2 6 6 Si 1.86296 * 109.47244 * 231.72686 * 4 3 2 7 7 C 1.39837 * 107.85782 * 179.72154 * 3 2 1 8 8 C 1.50707 * 126.45062 * 180.26320 * 7 3 2 9 9 C 1.37866 * 107.08785 * 0.41481 * 7 3 2 10 10 C 1.46685 * 126.23241 * 179.84969 * 9 7 3 11 11 O 1.21692 * 120.00002 * 359.71625 * 10 9 7 12 12 N 1.34777 * 119.99861 * 179.71024 * 10 9 7 13 13 C 1.46494 * 119.99631 * 179.97438 * 12 10 9 14 14 C 1.53002 * 109.47218 * 184.78664 * 13 12 10 15 15 C 1.50698 * 112.84675 * 306.02361 * 14 13 12 16 16 C 1.38240 * 119.99945 * 111.68138 * 15 14 13 17 17 C 1.38240 * 119.99801 * 179.78627 * 16 15 14 18 18 C 1.38233 * 119.99901 * 0.44693 * 17 16 15 19 19 C 1.38232 * 120.00328 * 359.80736 * 18 17 16 20 20 C 1.38235 * 120.00006 * 359.97438 * 19 18 17 21 21 C 1.53778 * 113.61825 * 174.82710 * 14 13 12 22 22 C 1.53780 * 87.07931 * 270.88277 * 21 14 13 23 23 H 1.09001 * 113.61677 * 89.11865 * 22 21 14 24 24 F 1.39898 * 113.61303 * 220.01571 * 22 21 14 25 25 C 1.53778 * 113.61309 * 77.32477 * 14 13 12 26 26 N 1.35532 * 125.56725 * 179.97438 * 2 1 3 27 27 H 1.09004 * 109.47461 * 265.33785 * 1 2 3 28 28 H 1.09000 * 109.47980 * 25.33948 * 1 2 3 29 29 H 1.08999 * 109.47289 * 145.34160 * 1 2 3 30 30 H 1.09005 * 109.47117 * 351.72401 * 4 3 2 31 31 H 0.96693 * 113.99822 * 60.00497 * 5 4 3 32 32 H 1.48500 * 110.00110 * 63.69084 * 6 4 3 33 33 H 1.48497 * 109.99939 * 185.01016 * 6 4 3 34 34 H 1.09002 * 109.46771 * 270.19656 * 8 7 3 35 35 H 1.08988 * 109.47574 * 30.20353 * 8 7 3 36 36 H 1.09005 * 109.46434 * 150.20521 * 8 7 3 37 37 H 0.96993 * 120.00143 * 0.02562 * 12 10 9 38 38 H 1.09005 * 109.47266 * 64.78745 * 13 12 10 39 39 H 1.08998 * 109.47462 * 304.78471 * 13 12 10 40 40 H 1.08000 * 120.00077 * 0.02562 * 16 15 14 41 41 H 1.08002 * 119.99718 * 180.27729 * 17 16 15 42 42 H 1.08003 * 119.99501 * 179.83514 * 18 17 16 43 43 H 1.08002 * 120.00151 * 180.02562 * 19 18 17 44 44 H 1.07997 * 120.00236 * 180.02562 * 20 19 18 45 45 H 1.09001 * 113.60980 * 25.42895 * 21 14 13 46 46 H 1.08996 * 113.61309 * 156.33599 * 21 14 13 47 47 H 1.09007 * 113.61398 * 203.66875 * 25 14 13 48 48 H 1.08997 * 113.61948 * 334.57391 * 25 14 13 49 49 H 0.97005 * 125.67473 * 0.02562 * 26 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2947 1.1020 0.0000 4 6 1.8198 2.5321 -0.0005 5 8 2.1425 3.1416 1.2510 6 14 2.6571 3.4640 -1.3794 7 6 3.6269 0.6768 0.0065 8 6 4.8484 1.5594 0.0144 9 6 3.6121 -0.7018 0.0008 10 6 4.7860 -1.5814 0.0013 11 8 5.9049 -1.1029 0.0020 12 7 4.6253 -2.9195 0.0012 13 6 5.7977 -3.7979 0.0011 14 6 5.3440 -5.2542 -0.1194 15 6 4.3352 -5.6416 0.9310 16 6 3.0297 -5.9149 0.5680 17 6 2.1054 -6.2746 1.5311 18 6 2.4845 -6.3519 2.8581 19 6 3.7888 -6.0735 3.2218 20 6 4.7141 -5.7182 2.2583 21 6 6.5059 -6.2523 -0.2555 22 6 6.4067 -6.0398 -1.7753 23 1 7.0206 -5.2172 -2.1422 24 9 6.5706 -7.2145 -2.5172 25 6 4.9353 -5.6559 -1.5464 26 7 2.2953 -1.1025 0.0005 27 1 -0.3634 -0.0835 1.0243 28 1 -0.3635 0.9287 -0.4398 29 1 -0.3634 -0.8453 -0.5844 30 1 0.7402 2.5564 -0.1489 31 1 3.0887 3.1553 1.4494 32 1 2.2587 2.8952 -2.6920 33 1 2.2905 4.9017 -1.3165 34 1 5.1463 1.7766 -1.0114 35 1 4.6201 2.4912 0.5315 36 1 5.6624 1.0484 0.5286 37 1 3.7335 -3.3009 0.0003 38 1 6.3510 -3.6656 0.9310 39 1 6.4401 -3.5466 -0.8428 40 1 2.7327 -5.8512 -0.4684 41 1 1.0865 -6.4925 1.2469 42 1 1.7617 -6.6303 3.6108 43 1 4.0850 -6.1343 4.2586 44 1 5.7332 -5.5010 2.5423 45 1 7.4412 -5.8948 0.1752 46 1 6.2519 -7.2637 0.0614 47 1 4.2519 -6.5044 -1.5824 48 1 4.6027 -4.8171 -2.1579 49 1 1.9834 -2.0210 0.0006 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13458982_12297754.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:26:13 Heat of formation + Delta-G solvation = -23.297718 kcal Electronic energy + Delta-G solvation = -32760.706287 eV Core-core repulsion = 28376.870045 eV Total energy + Delta-G solvation = -4383.836242 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.168 amu Computer time = 1.11 seconds Orbital eigenvalues (eV) -48.60300 -42.66970 -41.56791 -40.00257 -38.76778 -37.74707 -35.53391 -33.72727 -32.96441 -32.02964 -31.89592 -29.25074 -29.12984 -27.25032 -26.96830 -26.18000 -24.87829 -23.27196 -22.63015 -22.29559 -20.90879 -20.51331 -19.85585 -19.09957 -18.39997 -17.68522 -17.50881 -16.95713 -16.80144 -16.54927 -16.50773 -16.17183 -15.90376 -15.56400 -15.52868 -15.34591 -15.23020 -14.87299 -14.59447 -14.39894 -14.32023 -14.25867 -14.09046 -13.90127 -13.67217 -13.61745 -13.57677 -13.34499 -13.17082 -13.07388 -12.65999 -12.50020 -12.46572 -12.27699 -12.23552 -12.03395 -11.82857 -11.36685 -11.28617 -11.06026 -10.53517 -10.26391 -9.87496 -9.69560 -9.54872 -8.98723 -4.91219 0.35031 0.38924 0.44332 1.24371 1.53737 1.74400 1.92089 1.98823 2.10849 2.29675 2.77797 3.10673 3.21289 3.40286 3.50999 3.58162 3.67007 3.80118 3.84905 3.86752 4.00852 4.07544 4.08915 4.15190 4.19002 4.26062 4.33646 4.48046 4.49403 4.56526 4.61230 4.62269 4.63209 4.68126 4.69121 4.70468 4.82286 4.90946 4.93517 4.98312 5.05439 5.05846 5.10545 5.19333 5.24572 5.25767 5.39384 5.53912 5.59527 5.60677 5.71123 5.90746 6.04844 6.33272 6.50123 6.78894 7.08038 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.097 4.097 2 C 0.082 3.918 3 C -0.227 4.227 4 C -0.027 4.027 5 O -0.557 6.557 6 Si 0.741 3.259 7 C -0.068 4.068 8 C -0.102 4.102 9 C -0.077 4.077 10 C 0.590 3.410 11 O -0.556 6.556 12 N -0.716 5.716 13 C 0.149 3.851 14 C -0.041 4.041 15 C -0.073 4.073 16 C -0.126 4.126 17 C -0.123 4.123 18 C -0.131 4.131 19 C -0.129 4.129 20 C -0.119 4.119 21 C -0.137 4.137 22 C 0.055 3.945 23 H 0.125 0.875 24 F -0.224 7.224 25 C -0.147 4.147 26 N -0.525 5.525 27 H 0.086 0.914 28 H 0.087 0.913 29 H 0.088 0.912 30 H 0.112 0.888 31 H 0.387 0.613 32 H -0.293 1.293 33 H -0.289 1.289 34 H 0.084 0.916 35 H 0.088 0.912 36 H 0.074 0.926 37 H 0.404 0.596 38 H 0.072 0.928 39 H 0.081 0.919 40 H 0.139 0.861 41 H 0.138 0.862 42 H 0.131 0.869 43 H 0.129 0.871 44 H 0.126 0.874 45 H 0.098 0.902 46 H 0.096 0.904 47 H 0.103 0.897 48 H 0.092 0.908 49 H 0.427 0.573 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.702 -2.953 0.869 4.096 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C -0.037 4.037 3 C -0.233 4.233 4 C -0.139 4.139 5 O -0.365 6.365 6 Si 0.647 3.353 7 C -0.077 4.077 8 C -0.158 4.158 9 C -0.189 4.189 10 C 0.379 3.621 11 O -0.435 6.435 12 N -0.367 5.367 13 C 0.026 3.974 14 C -0.042 4.042 15 C -0.073 4.073 16 C -0.143 4.143 17 C -0.141 4.141 18 C -0.149 4.149 19 C -0.146 4.146 20 C -0.137 4.137 21 C -0.176 4.176 22 C 0.019 3.981 23 H 0.143 0.857 24 F -0.205 7.205 25 C -0.184 4.184 26 N -0.123 5.123 27 H 0.105 0.895 28 H 0.105 0.895 29 H 0.107 0.893 30 H 0.130 0.870 31 H 0.237 0.763 32 H -0.220 1.220 33 H -0.216 1.216 34 H 0.103 0.897 35 H 0.106 0.894 36 H 0.093 0.907 37 H 0.239 0.761 38 H 0.090 0.910 39 H 0.099 0.901 40 H 0.157 0.843 41 H 0.156 0.844 42 H 0.149 0.851 43 H 0.147 0.853 44 H 0.144 0.856 45 H 0.116 0.884 46 H 0.114 0.886 47 H 0.121 0.879 48 H 0.111 0.889 49 H 0.267 0.733 Dipole moment (debyes) X Y Z Total from point charges -2.606 -2.294 0.158 3.475 hybrid contribution -0.996 -1.225 0.273 1.602 sum -3.602 -3.519 0.431 5.054 Atomic orbital electron populations 1.20597 0.85805 1.04870 1.04171 1.20685 0.94649 0.85474 1.02913 1.19562 0.92737 0.95397 1.15622 1.24297 1.03503 0.91459 0.94617 1.86462 1.31188 1.80942 1.37883 0.93824 0.91139 0.75650 0.74645 1.20004 0.95138 0.91627 1.00954 1.20478 0.93813 0.97983 1.03526 1.19997 0.83347 0.94037 1.21527 1.17079 0.87265 0.81723 0.75999 1.90819 1.25223 1.75607 1.51856 1.45651 1.10530 1.04989 1.75565 1.21146 0.87400 0.85770 1.03133 1.20589 0.95828 0.93807 0.93964 1.19472 0.94049 1.00355 0.93421 1.21293 0.92482 1.00144 1.00418 1.21423 1.00492 0.99196 0.92976 1.21459 0.96572 0.99788 0.97107 1.21397 0.93826 0.99277 1.00148 1.21136 1.00132 0.99757 0.92641 1.23629 0.99051 1.00216 0.94659 1.23379 0.99188 0.84702 0.90834 0.85738 1.92787 1.96753 1.51522 1.79419 1.23756 0.96370 1.03307 0.95001 1.41759 1.04624 1.08911 1.56975 0.89537 0.89455 0.89284 0.87037 0.76309 1.22005 1.21607 0.89719 0.89380 0.90702 0.76069 0.90974 0.90052 0.84343 0.84431 0.85106 0.85298 0.85646 0.88358 0.88552 0.87892 0.88893 0.73344 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.59 10.19 71.24 0.73 1.32 16 2 C 0.08 -0.08 7.13 41.34 0.29 0.21 16 3 C -0.23 -0.40 4.71 -20.12 -0.09 -0.50 16 4 C -0.03 -0.04 2.85 71.23 0.20 0.17 16 5 O -0.56 -1.56 12.88 -148.98 -1.92 -3.48 16 6 Si 0.74 1.20 29.57 68.60 2.03 3.23 16 7 C -0.07 -0.19 5.83 -19.56 -0.11 -0.31 16 8 C -0.10 -0.01 7.97 71.24 0.57 0.56 16 9 C -0.08 -0.18 7.06 40.35 0.28 0.11 16 10 C 0.59 2.12 7.79 86.45 0.67 2.79 16 11 O -0.56 -5.49 14.80 -4.32 -0.06 -5.55 16 12 N -0.72 1.89 5.36 -467.08 -2.50 -0.61 16 13 C 0.15 -0.52 4.88 86.38 0.42 -0.10 16 14 C -0.04 0.24 0.75 -52.40 -0.04 0.20 16 15 C -0.07 0.31 4.02 -19.86 -0.08 0.23 16 16 C -0.13 0.66 8.69 22.27 0.19 0.86 16 17 C -0.12 0.54 10.05 22.27 0.22 0.76 16 18 C -0.13 0.35 10.05 22.27 0.22 0.57 16 19 C -0.13 0.23 10.05 22.27 0.22 0.45 16 20 C -0.12 0.27 9.47 22.27 0.21 0.48 16 21 C -0.14 0.66 6.97 31.12 0.22 0.87 16 22 C 0.05 -0.18 5.32 31.12 0.17 -0.01 16 23 H 0.13 -0.74 7.61 -2.39 -0.02 -0.75 16 24 F -0.22 -0.89 17.41 44.97 0.78 -0.11 16 25 C -0.15 0.86 6.18 31.12 0.19 1.06 16 26 N -0.52 1.46 5.99 -171.93 -1.03 0.43 16 27 H 0.09 -0.58 8.14 -2.38 -0.02 -0.60 16 28 H 0.09 -0.54 6.80 -2.39 -0.02 -0.55 16 29 H 0.09 -0.85 8.14 -2.39 -0.02 -0.87 16 30 H 0.11 0.04 6.43 -2.38 -0.02 0.03 16 31 H 0.39 -1.35 6.89 -74.06 -0.51 -1.86 16 32 H -0.29 -2.18 7.11 99.48 0.71 -1.47 16 33 H -0.29 -2.18 7.11 99.48 0.71 -1.47 16 34 H 0.08 -0.12 7.64 -2.39 -0.02 -0.14 16 35 H 0.09 -0.47 5.31 -2.39 -0.01 -0.49 16 36 H 0.07 0.29 6.49 -2.38 -0.02 0.28 16 37 H 0.40 -2.58 6.66 -92.71 -0.62 -3.19 16 38 H 0.07 -0.13 8.14 -2.38 -0.02 -0.15 16 39 H 0.08 -0.25 7.31 -2.39 -0.02 -0.26 16 40 H 0.14 -1.21 6.55 -2.91 -0.02 -1.23 16 41 H 0.14 -1.06 8.06 -2.91 -0.02 -1.09 16 42 H 0.13 -0.66 8.06 -2.91 -0.02 -0.69 16 43 H 0.13 -0.48 8.06 -2.91 -0.02 -0.51 16 44 H 0.13 -0.45 8.06 -2.91 -0.02 -0.47 16 45 H 0.10 -0.65 8.10 -2.39 -0.02 -0.67 16 46 H 0.10 -0.29 8.09 -2.39 -0.02 -0.30 16 47 H 0.10 -0.57 6.95 -2.38 -0.02 -0.58 16 48 H 0.09 -0.67 8.10 -2.39 -0.02 -0.69 16 49 H 0.43 -3.70 8.19 -92.70 -0.76 -4.46 16 Total: 0.00 -19.54 393.93 0.96 -18.58 By element: Atomic # 1 Polarization: -21.37 SS G_CDS: -0.83 Total: -22.20 kcal Atomic # 6 Polarization: 5.22 SS G_CDS: 4.49 Total: 9.71 kcal Atomic # 7 Polarization: 3.35 SS G_CDS: -3.53 Total: -0.18 kcal Atomic # 8 Polarization: -7.05 SS G_CDS: -1.98 Total: -9.03 kcal Atomic # 9 Polarization: -0.89 SS G_CDS: 0.78 Total: -0.11 kcal Atomic # 14 Polarization: 1.20 SS G_CDS: 2.03 Total: 3.23 kcal Total: -19.54 0.96 -18.58 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13458982_12297754.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -4.713 kcal (2) G-P(sol) polarization free energy of solvation -19.540 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -24.254 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.956 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.585 kcal (6) G-S(sol) free energy of system = (1) + (5) -23.298 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.11 seconds