Wall clock time and date at job start Sat Mar 6 2021 21:26:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86302 * 109.47089 * 2 1 4 4 C 1.50700 * 109.47387 * 119.99769 * 2 1 3 5 5 C 1.38239 * 119.99789 * 65.00069 * 4 2 1 6 6 C 1.38229 * 120.00195 * 180.02562 * 5 4 2 7 7 C 1.38239 * 119.99871 * 359.96158 * 6 5 4 8 8 C 1.50701 * 119.99727 * 180.02562 * 7 6 5 9 9 C 1.50697 * 109.47205 * 89.99724 * 8 7 6 10 10 O 1.21287 * 120.00019 * 0.02562 * 9 8 7 11 11 N 1.34774 * 120.00067 * 179.97438 * 9 8 7 12 12 C 1.46501 * 119.99932 * 180.02562 * 11 9 8 13 13 C 1.53004 * 109.46965 * 184.65244 * 12 11 9 14 14 C 1.50709 * 112.84713 * 63.60648 * 13 12 11 15 15 C 1.38236 * 120.00117 * 66.07419 * 14 13 12 16 16 C 1.38226 * 119.99977 * 179.97438 * 15 14 13 17 17 C 1.38243 * 120.00098 * 359.97438 * 16 15 14 18 18 C 1.38235 * 119.99931 * 0.27902 * 17 16 15 19 19 C 1.38232 * 119.99557 * 246.05226 * 14 13 12 20 20 C 1.53778 * 113.61585 * 292.41133 * 13 12 11 21 21 C 1.53785 * 87.07939 * 270.79617 * 20 13 12 22 22 H 1.09000 * 113.61052 * 89.11634 * 21 20 13 23 23 F 1.39893 * 113.61882 * 219.93320 * 21 20 13 24 24 C 1.53775 * 113.61501 * 194.79906 * 13 12 11 25 25 C 1.38229 * 119.99802 * 0.27210 * 7 6 5 26 26 C 1.38233 * 120.00410 * 359.53639 * 25 7 6 27 27 H 0.96698 * 114.00034 * 300.00295 * 1 2 3 28 28 H 1.09005 * 109.47304 * 239.99897 * 2 1 3 29 29 H 1.48498 * 109.99948 * 178.68270 * 3 2 1 30 30 H 1.48501 * 109.99874 * 299.99995 * 3 2 1 31 31 H 1.08008 * 119.99722 * 0.02562 * 5 4 2 32 32 H 1.08002 * 120.00119 * 179.97438 * 6 5 4 33 33 H 1.08999 * 109.47168 * 329.99490 * 8 7 6 34 34 H 1.09004 * 109.46772 * 209.99854 * 8 7 6 35 35 H 0.96997 * 119.99755 * 0.02562 * 11 9 8 36 36 H 1.09000 * 109.47302 * 64.65783 * 12 11 9 37 37 H 1.09000 * 109.47392 * 304.64806 * 12 11 9 38 38 H 1.07997 * 119.99740 * 359.97438 * 15 14 13 39 39 H 1.07999 * 120.00085 * 179.97438 * 16 15 14 40 40 H 1.07997 * 119.99999 * 179.97438 * 17 16 15 41 41 H 1.07996 * 119.99907 * 179.71912 * 18 17 16 42 42 H 1.08000 * 120.00601 * 359.97438 * 19 14 13 43 43 H 1.08992 * 113.61760 * 25.34555 * 20 13 12 44 44 H 1.09000 * 113.61647 * 156.25307 * 20 13 12 45 45 H 1.08998 * 113.61856 * 203.75189 * 24 13 12 46 46 H 1.09006 * 113.61482 * 334.65306 * 24 13 12 47 47 H 1.08003 * 120.00036 * 179.73192 * 25 7 6 48 48 H 1.07994 * 120.00528 * 180.21239 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7103 1.2305 5 6 1.6848 -2.0602 1.3984 6 6 2.1452 -2.7117 2.5272 7 6 2.8528 -2.0136 3.4879 8 6 3.3552 -2.7241 4.7183 9 6 4.7365 -3.2666 4.4564 10 8 5.2616 -3.0930 3.3770 11 7 5.3888 -3.9438 5.4219 12 6 6.7318 -4.4708 5.1674 13 6 7.1953 -5.2900 6.3737 14 6 6.3414 -6.5078 6.6170 15 6 6.3282 -7.5380 5.6953 16 6 5.5454 -8.6551 5.9187 17 6 4.7762 -8.7424 7.0641 18 6 4.7854 -7.7099 7.9832 19 6 5.5718 -6.5947 7.7620 20 6 7.4373 -4.4453 7.6357 21 6 8.8817 -4.2621 7.1406 22 1 9.0140 -3.3972 6.4905 23 9 9.8364 -4.3255 8.1612 24 6 8.7043 -5.5856 6.3745 25 6 3.0952 -0.6628 3.3223 26 6 2.6383 -0.0121 2.1915 27 1 -0.3933 0.4417 0.7650 28 1 1.7924 -0.5139 -0.8900 29 1 3.5346 1.7703 0.0321 30 1 1.5615 2.4679 -1.2085 31 1 1.1325 -2.6057 0.6475 32 1 1.9521 -3.7662 2.6586 33 1 2.6824 -3.5459 4.9635 34 1 3.3921 -2.0236 5.5527 35 1 4.9690 -4.0823 6.2853 36 1 7.4219 -3.6431 5.0037 37 1 6.7109 -5.1070 4.2826 38 1 6.9294 -7.4699 4.8008 39 1 5.5347 -9.4598 5.1985 40 1 4.1643 -9.6151 7.2384 41 1 4.1810 -7.7761 8.8757 42 1 5.5827 -5.7902 8.4824 43 1 6.8628 -3.5194 7.6583 44 1 7.3624 -5.0138 8.5627 45 1 8.9765 -6.4665 6.9559 46 1 9.1511 -5.5790 5.3802 47 1 3.6443 -0.1165 4.0749 48 1 2.8306 1.0425 2.0605 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13458982_12335836.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:26:25 Heat of formation + Delta-G solvation = -41.429792 kcal Electronic energy + Delta-G solvation = -30804.508157 eV Core-core repulsion = 26512.623039 eV Total energy + Delta-G solvation = -4291.885118 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 356.157 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -48.57781 -41.77918 -40.92475 -39.93793 -38.87546 -37.59423 -35.29607 -34.04282 -32.16921 -31.98387 -31.91535 -30.25209 -28.27339 -27.26763 -25.74828 -24.88967 -23.78675 -23.36318 -22.65279 -22.18164 -21.31602 -20.05152 -18.60964 -18.38903 -18.03320 -17.64358 -17.24373 -16.97751 -16.66961 -16.47220 -16.33942 -16.07817 -15.95928 -15.66260 -15.59307 -15.56017 -15.09199 -14.73352 -14.57942 -14.53231 -14.43500 -14.39594 -13.98714 -13.76799 -13.68987 -13.55402 -13.21756 -13.06413 -12.86689 -12.59837 -12.55271 -12.32380 -12.17858 -11.93475 -11.91475 -11.66828 -11.47024 -11.41954 -10.93292 -10.38814 -10.15857 -9.94272 -9.83477 -9.76582 -9.59294 -5.00672 0.26822 0.29238 0.37449 0.49480 1.33617 1.63391 1.68492 2.01192 2.02456 2.70150 2.79091 2.97633 3.10222 3.27303 3.39815 3.48420 3.49375 3.59543 3.72376 3.76836 3.85425 3.91939 3.95892 3.98618 4.04202 4.06597 4.13925 4.22618 4.37298 4.38108 4.44913 4.48145 4.48366 4.51372 4.54166 4.55498 4.59564 4.67547 4.70989 4.81365 4.95818 5.00156 5.01178 5.09683 5.11640 5.29685 5.40416 5.45380 5.51436 5.52936 5.57717 5.60820 5.95811 6.02604 6.39968 6.60473 7.18798 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.068 4.068 3 Si 0.686 3.314 4 C -0.119 4.119 5 C -0.091 4.091 6 C -0.103 4.103 7 C -0.062 4.062 8 C -0.103 4.103 9 C 0.515 3.485 10 O -0.527 6.527 11 N -0.728 5.728 12 C 0.147 3.853 13 C -0.054 4.054 14 C -0.068 4.068 15 C -0.109 4.109 16 C -0.115 4.115 17 C -0.120 4.120 18 C -0.116 4.116 19 C -0.119 4.119 20 C -0.153 4.153 21 C 0.065 3.935 22 H 0.111 0.889 23 F -0.204 7.204 24 C -0.140 4.140 25 C -0.100 4.100 26 C -0.114 4.114 27 H 0.378 0.622 28 H 0.113 0.887 29 H -0.258 1.258 30 H -0.255 1.255 31 H 0.125 0.875 32 H 0.122 0.878 33 H 0.105 0.895 34 H 0.105 0.895 35 H 0.402 0.598 36 H 0.073 0.927 37 H 0.078 0.922 38 H 0.121 0.879 39 H 0.123 0.877 40 H 0.122 0.878 41 H 0.123 0.877 42 H 0.124 0.876 43 H 0.085 0.915 44 H 0.104 0.896 45 H 0.103 0.897 46 H 0.087 0.913 47 H 0.124 0.876 48 H 0.126 0.874 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.343 -0.279 5.444 5.934 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.345 6.345 2 C -0.179 4.179 3 Si 0.588 3.412 4 C -0.119 4.119 5 C -0.109 4.109 6 C -0.122 4.122 7 C -0.063 4.063 8 C -0.143 4.143 9 C 0.301 3.699 10 O -0.402 6.402 11 N -0.381 5.381 12 C 0.023 3.977 13 C -0.055 4.055 14 C -0.068 4.068 15 C -0.127 4.127 16 C -0.133 4.133 17 C -0.138 4.138 18 C -0.134 4.134 19 C -0.137 4.137 20 C -0.191 4.191 21 C 0.029 3.971 22 H 0.129 0.871 23 F -0.184 7.184 24 C -0.179 4.179 25 C -0.118 4.118 26 C -0.131 4.131 27 H 0.226 0.774 28 H 0.130 0.870 29 H -0.183 1.183 30 H -0.180 1.180 31 H 0.143 0.857 32 H 0.140 0.860 33 H 0.123 0.877 34 H 0.124 0.876 35 H 0.236 0.764 36 H 0.092 0.908 37 H 0.096 0.904 38 H 0.139 0.861 39 H 0.141 0.859 40 H 0.140 0.860 41 H 0.141 0.859 42 H 0.142 0.858 43 H 0.104 0.896 44 H 0.122 0.878 45 H 0.121 0.879 46 H 0.106 0.894 47 H 0.142 0.858 48 H 0.144 0.856 Dipole moment (debyes) X Y Z Total from point charges -1.346 0.139 3.684 3.924 hybrid contribution 0.022 -0.930 0.364 0.999 sum -1.324 -0.791 4.048 4.332 Atomic orbital electron populations 1.86506 1.17124 1.81712 1.49198 1.25054 0.85175 1.10105 0.97585 0.94833 0.81197 0.78078 0.87080 1.20314 0.99801 0.95084 0.96711 1.20961 0.98712 0.93755 0.97434 1.21015 0.97778 0.99599 0.93758 1.19251 0.97977 0.93733 0.95332 1.20682 0.94094 1.01645 0.97866 1.20558 0.87388 0.77910 0.84043 1.90770 1.68336 1.57072 1.24071 1.45885 1.17924 1.57316 1.16990 1.21104 0.83667 0.96963 0.95976 1.20767 0.95001 0.93899 0.95833 1.19377 0.97570 0.94662 0.95156 1.20968 0.99218 0.93536 0.98987 1.21192 0.96571 0.97990 0.97587 1.21235 0.99196 0.98922 0.94444 1.21181 0.98981 0.93836 0.99401 1.21068 0.96934 0.98590 0.97066 1.23780 0.95928 1.01013 0.98369 1.23116 0.86281 0.99744 0.87941 0.87098 1.92829 1.66402 1.97551 1.61645 1.23679 0.93367 0.98408 1.02402 1.20903 0.99208 0.93945 0.97754 1.20915 0.98828 0.99124 0.94240 0.77440 0.87000 1.18265 1.18028 0.85694 0.86037 0.87715 0.87643 0.76387 0.90839 0.90389 0.86117 0.85919 0.85979 0.85868 0.85817 0.89630 0.87804 0.87890 0.89386 0.85773 0.85622 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.52 12.83 -35.23 -0.45 -0.97 16 2 C -0.07 -0.06 2.80 36.01 0.10 0.04 16 3 Si 0.69 -0.08 29.80 -169.99 -5.07 -5.15 16 4 C -0.12 -0.16 5.35 -104.62 -0.56 -0.72 16 5 C -0.09 -0.17 9.69 -39.58 -0.38 -0.55 16 6 C -0.10 -0.14 9.70 -39.58 -0.38 -0.52 16 7 C -0.06 -0.04 4.37 -104.62 -0.46 -0.50 16 8 C -0.10 0.20 5.83 -29.04 -0.17 0.03 16 9 C 0.51 0.28 7.82 -10.99 -0.09 0.19 16 10 O -0.53 -2.72 16.03 5.55 0.09 -2.63 16 11 N -0.73 1.40 5.22 -60.29 -0.31 1.09 16 12 C 0.15 -0.23 4.83 -4.04 -0.02 -0.25 16 13 C -0.05 0.14 0.62 -154.85 -0.10 0.04 16 14 C -0.07 0.10 4.56 -104.62 -0.48 -0.38 16 15 C -0.11 0.07 9.37 -39.59 -0.37 -0.30 16 16 C -0.12 0.06 10.05 -39.58 -0.40 -0.34 16 17 C -0.12 0.09 10.05 -39.58 -0.40 -0.31 16 18 C -0.12 0.14 10.05 -39.58 -0.40 -0.26 16 19 C -0.12 0.21 9.05 -39.58 -0.36 -0.15 16 20 C -0.15 0.44 6.04 -25.92 -0.16 0.29 16 21 C 0.07 -0.10 5.32 -25.83 -0.14 -0.24 16 22 H 0.11 -0.31 7.60 -51.93 -0.39 -0.70 16 23 F -0.20 -0.37 17.41 2.25 0.04 -0.33 16 24 C -0.14 0.29 7.02 -25.83 -0.18 0.11 16 25 C -0.10 -0.06 9.70 -39.59 -0.38 -0.44 16 26 C -0.11 -0.07 8.67 -39.58 -0.34 -0.42 16 27 H 0.38 -1.15 8.70 45.56 0.40 -0.75 16 28 H 0.11 0.17 7.96 -51.93 -0.41 -0.24 16 29 H -0.26 -0.66 7.11 56.52 0.40 -0.26 16 30 H -0.26 -0.77 7.11 56.52 0.40 -0.36 16 31 H 0.13 0.16 8.06 -52.48 -0.42 -0.26 16 32 H 0.12 0.00 8.06 -52.49 -0.42 -0.42 16 33 H 0.10 -0.38 8.09 -51.93 -0.42 -0.80 16 34 H 0.11 -0.44 8.08 -51.93 -0.42 -0.86 16 35 H 0.40 -1.60 8.24 -40.82 -0.34 -1.94 16 36 H 0.07 -0.10 7.31 -51.93 -0.38 -0.48 16 37 H 0.08 -0.01 8.00 -51.93 -0.42 -0.42 16 38 H 0.12 -0.17 8.06 -52.49 -0.42 -0.59 16 39 H 0.12 -0.20 8.06 -52.49 -0.42 -0.63 16 40 H 0.12 -0.25 8.06 -52.49 -0.42 -0.67 16 41 H 0.12 -0.33 8.06 -52.49 -0.42 -0.76 16 42 H 0.12 -0.42 6.42 -52.49 -0.34 -0.76 16 43 H 0.09 -0.33 8.00 -51.93 -0.42 -0.75 16 44 H 0.10 -0.27 6.80 -51.93 -0.35 -0.62 16 45 H 0.10 -0.14 8.09 -51.93 -0.42 -0.56 16 46 H 0.09 -0.24 8.10 -51.93 -0.42 -0.66 16 47 H 0.12 -0.16 8.06 -52.48 -0.42 -0.58 16 48 H 0.13 -0.17 4.91 -52.49 -0.26 -0.42 16 LS Contribution 399.13 15.07 6.01 6.01 Total: 0.00 -9.07 399.13 -12.09 -21.16 By element: Atomic # 1 Polarization: -7.76 SS G_CDS: -6.75 Total: -14.51 kcal Atomic # 6 Polarization: 0.99 SS G_CDS: -5.66 Total: -4.67 kcal Atomic # 7 Polarization: 1.40 SS G_CDS: -0.31 Total: 1.09 kcal Atomic # 8 Polarization: -3.24 SS G_CDS: -0.36 Total: -3.60 kcal Atomic # 9 Polarization: -0.37 SS G_CDS: 0.04 Total: -0.33 kcal Atomic # 14 Polarization: -0.08 SS G_CDS: -5.07 Total: -5.15 kcal Total LS contribution 6.01 Total: 6.01 kcal Total: -9.07 -12.09 -21.16 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13458982_12335836.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -20.271 kcal (2) G-P(sol) polarization free energy of solvation -9.067 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -29.338 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.092 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.159 kcal (6) G-S(sol) free energy of system = (1) + (5) -41.430 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds