Wall clock time and date at job start Sat Mar 6 2021 21:26:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86301 * 109.46905 * 2 1 4 4 C 1.50696 * 109.47275 * 119.99868 * 2 1 3 5 5 C 1.34454 * 126.48165 * 254.98180 * 4 2 1 6 6 N 1.36571 * 109.98466 * 180.02562 * 5 4 2 7 7 C 1.37826 * 109.85743 * 0.22341 * 6 5 4 8 8 C 1.38653 * 133.37548 * 180.42425 * 7 6 5 9 9 C 1.39315 * 119.66666 * 179.62307 * 8 7 6 10 10 C 1.47582 * 119.83022 * 179.77141 * 9 8 7 11 11 O 1.21590 * 120.00346 * 359.97438 * 10 9 8 12 12 N 1.34780 * 119.99872 * 179.97438 * 10 9 8 13 13 C 1.46503 * 120.00249 * 180.02562 * 12 10 9 14 14 C 1.52999 * 109.47383 * 175.92235 * 13 12 10 15 15 C 1.50697 * 112.84677 * 65.11179 * 14 13 12 16 16 C 1.38239 * 120.00116 * 245.83883 * 15 14 13 17 17 C 1.38235 * 119.99952 * 179.79056 * 16 15 14 18 18 C 1.38228 * 119.99905 * 0.44454 * 17 16 15 19 19 C 1.38235 * 120.00196 * 359.80783 * 18 17 16 20 20 C 1.38230 * 119.99958 * 359.97438 * 19 18 17 21 21 C 1.53787 * 113.61357 * 293.91817 * 14 13 12 22 22 C 1.53783 * 87.07887 * 270.88325 * 21 14 13 23 23 H 1.09001 * 113.61678 * 89.11550 * 22 21 14 24 24 F 1.39901 * 113.61126 * 219.93591 * 22 21 14 25 25 C 1.53775 * 113.61485 * 196.31191 * 14 13 12 26 26 C 1.40199 * 120.33856 * 359.75513 * 9 8 7 27 27 C 1.36238 * 120.37458 * 359.97438 * 26 9 8 28 28 C 1.39873 * 119.96032 * 0.02562 * 27 26 9 29 29 H 0.96698 * 113.99923 * 299.99497 * 1 2 3 30 30 H 1.08996 * 109.47165 * 240.00145 * 2 1 3 31 31 H 1.48503 * 109.99809 * 299.99782 * 3 2 1 32 32 H 1.48504 * 110.00120 * 61.31813 * 3 2 1 33 33 H 1.07999 * 125.00928 * 359.97438 * 5 4 2 34 34 H 0.96997 * 125.07153 * 179.97438 * 6 5 4 35 35 H 1.07999 * 120.16408 * 359.39288 * 8 7 6 36 36 H 0.97005 * 119.99727 * 359.97438 * 12 10 9 37 37 H 1.09002 * 109.46766 * 295.92484 * 13 12 10 38 38 H 1.09005 * 109.46691 * 55.92246 * 13 12 10 39 39 H 1.08007 * 119.99909 * 0.02562 * 16 15 14 40 40 H 1.07998 * 119.99564 * 180.27362 * 17 16 15 41 41 H 1.08010 * 119.99748 * 179.83789 * 18 17 16 42 42 H 1.08001 * 119.99599 * 180.02562 * 19 18 17 43 43 H 1.08001 * 119.99788 * 179.97438 * 20 19 18 44 44 H 1.08997 * 113.61684 * 25.42986 * 21 14 13 45 45 H 1.08998 * 113.61080 * 156.33729 * 21 14 13 46 46 H 1.08995 * 113.61356 * 203.66747 * 25 14 13 47 47 H 1.09004 * 113.61319 * 334.56544 * 25 14 13 48 48 H 1.07995 * 119.81548 * 180.02562 * 26 9 8 49 49 H 1.08002 * 120.01482 * 179.97438 * 27 26 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.4620 -0.1362 2.3243 6 7 2.8043 -1.0947 3.2350 7 6 2.5001 -2.3434 2.7373 8 6 2.6320 -3.6279 3.2424 9 6 2.2139 -4.7154 2.4787 10 6 2.3573 -6.0845 3.0107 11 8 2.8397 -6.2612 4.1127 12 7 1.9534 -7.1391 2.2750 13 6 2.0952 -8.4982 2.8032 14 6 1.4729 -9.4942 1.8225 15 6 2.1991 -9.5475 0.5031 16 6 1.5679 -9.1227 -0.6510 17 6 2.2356 -9.1676 -1.8606 18 6 3.5312 -9.6460 -1.9175 19 6 4.1606 -10.0757 -0.7642 20 6 3.4946 -10.0266 0.4461 21 6 -0.0515 -9.3489 1.6812 22 6 -0.1753 -10.3408 2.8499 23 1 -0.1826 -9.8628 3.8294 24 9 -1.2104 -11.2684 2.6903 25 6 1.2076 -10.8790 2.4362 26 6 1.6573 -4.5159 1.2075 27 6 1.5190 -3.2568 0.7059 28 6 1.9341 -2.1547 1.4606 29 1 -0.3933 0.4416 0.7651 30 1 1.7924 -0.5138 -0.8900 31 1 1.5615 2.4679 -1.2086 32 1 1.5878 2.4586 1.2242 33 1 2.5983 0.9262 2.4622 34 1 3.2054 -0.9225 4.1013 35 1 3.0602 -3.7847 4.2214 36 1 1.5682 -6.9982 1.3959 37 1 3.1525 -8.7289 2.9335 38 1 1.5867 -8.5691 3.7648 39 1 0.5544 -8.7520 -0.6070 40 1 1.7439 -8.8315 -2.7615 41 1 4.0519 -9.6835 -2.8630 42 1 5.1731 -10.4491 -0.8087 43 1 3.9862 -10.3628 1.3470 44 1 -0.4185 -8.3497 1.9158 45 1 -0.4412 -9.7337 0.7388 46 1 1.1614 -11.6812 1.6998 47 1 1.8564 -11.1143 3.2799 48 1 1.3357 -5.3651 0.6228 49 1 1.0899 -3.1098 -0.2743 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13458982_12335838.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:26:29 Heat of formation + Delta-G solvation = -0.308892 kcal Electronic energy + Delta-G solvation = -34268.643650 eV Core-core repulsion = 29656.663477 eV Total energy + Delta-G solvation = -4611.980174 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 381.153 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -48.51923 -42.49823 -41.68837 -40.38444 -38.85400 -37.96612 -37.48967 -35.32138 -33.27654 -32.13964 -31.93042 -30.92446 -30.71891 -28.44769 -27.21742 -26.52364 -25.32882 -24.14595 -23.62527 -23.28417 -22.58111 -21.36122 -20.87059 -20.08178 -19.36374 -18.56650 -18.27140 -17.77559 -17.44514 -17.05846 -16.93764 -16.62582 -16.26895 -16.22988 -15.97889 -15.81209 -15.66217 -15.52916 -15.37662 -15.17296 -14.99467 -14.75437 -14.57519 -14.41599 -14.40045 -14.32881 -13.89781 -13.68839 -13.59954 -13.43961 -13.11268 -12.62160 -12.56002 -12.51265 -12.49156 -12.27614 -12.17647 -11.86453 -11.81075 -11.40549 -11.36201 -10.94160 -10.76600 -10.50539 -10.12221 -9.88889 -9.71133 -9.35887 -8.82717 -4.99008 -0.26450 0.34365 0.39455 0.42861 1.27170 1.35173 1.52698 1.84466 1.93437 2.02345 2.17806 2.75973 2.93521 3.03663 3.15152 3.32739 3.43734 3.45642 3.53471 3.59612 3.73155 3.75203 3.79883 3.86319 4.00560 4.03038 4.08479 4.12421 4.18764 4.31066 4.42223 4.43094 4.47316 4.51992 4.54864 4.55622 4.58165 4.59560 4.65088 4.73004 4.76240 4.86699 4.98398 5.01089 5.05581 5.17459 5.23484 5.32982 5.43317 5.49049 5.50690 5.56683 5.58138 5.60392 5.97990 6.01144 6.34342 6.46960 6.47541 7.22154 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.531 6.531 2 C -0.038 4.038 3 Si 0.684 3.316 4 C -0.206 4.206 5 C 0.074 3.926 6 N -0.584 5.584 7 C 0.082 3.918 8 C -0.056 4.056 9 C -0.120 4.120 10 C 0.564 3.436 11 O -0.538 6.538 12 N -0.721 5.721 13 C 0.146 3.854 14 C -0.055 4.055 15 C -0.069 4.069 16 C -0.119 4.119 17 C -0.115 4.115 18 C -0.120 4.120 19 C -0.115 4.115 20 C -0.109 4.109 21 C -0.154 4.154 22 C 0.065 3.935 23 H 0.112 0.888 24 F -0.204 7.204 25 C -0.139 4.139 26 C -0.113 4.113 27 C -0.071 4.071 28 C -0.063 4.063 29 H 0.374 0.626 30 H 0.115 0.885 31 H -0.256 1.256 32 H -0.260 1.260 33 H 0.176 0.824 34 H 0.422 0.578 35 H 0.136 0.864 36 H 0.402 0.598 37 H 0.077 0.923 38 H 0.079 0.921 39 H 0.124 0.876 40 H 0.123 0.877 41 H 0.122 0.878 42 H 0.123 0.877 43 H 0.122 0.878 44 H 0.086 0.914 45 H 0.104 0.896 46 H 0.103 0.897 47 H 0.088 0.912 48 H 0.124 0.876 49 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.612 2.617 -1.523 3.999 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.148 4.148 3 Si 0.585 3.415 4 C -0.214 4.214 5 C -0.055 4.055 6 N -0.186 5.186 7 C -0.024 4.024 8 C -0.077 4.077 9 C -0.125 4.125 10 C 0.352 3.648 11 O -0.416 6.416 12 N -0.374 5.374 13 C 0.023 3.977 14 C -0.056 4.056 15 C -0.069 4.069 16 C -0.137 4.137 17 C -0.133 4.133 18 C -0.138 4.138 19 C -0.133 4.133 20 C -0.127 4.127 21 C -0.192 4.192 22 C 0.029 3.971 23 H 0.129 0.871 24 F -0.185 7.185 25 C -0.177 4.177 26 C -0.133 4.133 27 C -0.090 4.090 28 C -0.068 4.068 29 H 0.221 0.779 30 H 0.133 0.867 31 H -0.181 1.181 32 H -0.185 1.185 33 H 0.193 0.807 34 H 0.260 0.740 35 H 0.154 0.846 36 H 0.238 0.762 37 H 0.095 0.905 38 H 0.097 0.903 39 H 0.142 0.858 40 H 0.141 0.859 41 H 0.140 0.860 42 H 0.141 0.859 43 H 0.140 0.860 44 H 0.104 0.896 45 H 0.122 0.878 46 H 0.121 0.879 47 H 0.107 0.893 48 H 0.142 0.858 49 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges 2.861 3.012 -1.162 4.314 hybrid contribution -1.036 -0.100 0.456 1.137 sum 1.825 2.912 -0.706 3.508 Atomic orbital electron populations 1.86611 1.18058 1.79932 1.49070 1.24292 0.83390 1.09898 0.97238 0.95168 0.91502 0.74296 0.80530 1.20668 1.10568 0.92090 0.98069 1.21822 0.99737 0.94494 0.89415 1.41722 1.54712 1.04000 1.18136 1.18077 1.03236 0.86278 0.94859 1.20067 0.99488 0.88074 1.00110 1.19395 1.05022 0.92255 0.95813 1.18129 0.77568 0.84514 0.84566 1.90800 1.44399 1.86231 1.20188 1.45758 1.64605 1.05723 1.21298 1.21140 1.01454 0.79653 0.95474 1.20764 0.94667 0.96602 0.93545 1.19391 0.94381 0.99817 0.93342 1.21085 1.00006 1.00510 0.92132 1.21178 0.94968 0.99392 0.97799 1.21232 0.95257 0.98715 0.98553 1.21187 1.00035 0.99501 0.92607 1.20966 0.94113 0.99489 0.98098 1.23789 0.94491 1.00961 0.99935 1.23143 0.84687 0.89085 1.00188 0.87057 1.92828 1.60857 1.67831 1.96937 1.23686 0.96037 0.96119 1.01869 1.20673 1.00594 0.97306 0.94697 1.20197 0.98696 0.90433 0.99650 1.19162 1.00918 0.93018 0.93655 0.77887 0.86721 1.18056 1.18483 0.80703 0.74021 0.84619 0.76157 0.90466 0.90329 0.85804 0.85852 0.85981 0.85908 0.86047 0.89578 0.87783 0.87873 0.89341 0.85804 0.85166 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.50 12.88 -35.23 -0.45 -0.96 16 2 C -0.04 0.03 3.06 36.00 0.11 0.14 16 3 Si 0.68 -1.38 30.82 -169.99 -5.24 -6.62 16 4 C -0.21 0.03 5.57 -102.74 -0.57 -0.54 16 5 C 0.07 -0.13 10.43 -16.78 -0.17 -0.31 16 6 N -0.58 0.82 6.07 -10.68 -0.06 0.76 16 7 C 0.08 0.09 7.26 -84.00 -0.61 -0.52 16 8 C -0.06 -0.11 9.61 -39.03 -0.37 -0.48 16 9 C -0.12 -0.22 5.87 -104.95 -0.62 -0.84 16 10 C 0.56 1.50 7.76 -12.45 -0.10 1.40 16 11 O -0.54 -3.24 16.31 5.29 0.09 -3.16 16 12 N -0.72 0.11 5.14 -61.33 -0.32 -0.20 16 13 C 0.15 -0.11 4.84 -4.04 -0.02 -0.13 16 14 C -0.06 0.10 0.63 -154.85 -0.10 0.01 16 15 C -0.07 0.06 4.51 -104.62 -0.47 -0.41 16 16 C -0.12 0.13 9.05 -39.58 -0.36 -0.23 16 17 C -0.12 0.08 10.05 -39.59 -0.40 -0.32 16 18 C -0.12 0.04 10.05 -39.59 -0.40 -0.36 16 19 C -0.12 0.02 10.05 -39.59 -0.40 -0.38 16 20 C -0.11 0.04 9.34 -39.59 -0.37 -0.33 16 21 C -0.15 0.30 6.10 -25.91 -0.16 0.14 16 22 C 0.07 -0.06 5.32 -25.78 -0.14 -0.19 16 23 H 0.11 -0.23 7.61 -51.93 -0.39 -0.62 16 24 F -0.20 -0.48 17.41 2.25 0.04 -0.44 16 25 C -0.14 0.23 7.02 -25.78 -0.18 0.05 16 26 C -0.11 -0.03 9.46 -39.57 -0.37 -0.40 16 27 C -0.07 -0.06 10.03 -39.69 -0.40 -0.46 16 28 C -0.06 -0.09 6.35 -105.05 -0.67 -0.76 16 29 H 0.37 -0.69 8.70 45.56 0.40 -0.29 16 30 H 0.11 -0.12 7.96 -51.93 -0.41 -0.53 16 31 H -0.26 -0.42 7.11 56.52 0.40 -0.01 16 32 H -0.26 0.19 7.00 56.52 0.40 0.59 16 33 H 0.18 -0.80 6.27 -52.49 -0.33 -1.12 16 34 H 0.42 -1.72 8.96 -40.82 -0.37 -2.08 16 35 H 0.14 0.23 7.62 -52.49 -0.40 -0.17 16 36 H 0.40 -0.72 6.21 -40.82 -0.25 -0.97 16 37 H 0.08 0.00 7.97 -51.93 -0.41 -0.41 16 38 H 0.08 -0.04 7.31 -51.93 -0.38 -0.42 16 39 H 0.12 -0.32 6.41 -52.48 -0.34 -0.66 16 40 H 0.12 -0.27 8.06 -52.49 -0.42 -0.69 16 41 H 0.12 -0.20 8.06 -52.48 -0.42 -0.63 16 42 H 0.12 -0.18 8.06 -52.49 -0.42 -0.61 16 43 H 0.12 -0.16 8.06 -52.49 -0.42 -0.58 16 44 H 0.09 -0.21 7.95 -51.93 -0.41 -0.62 16 45 H 0.10 -0.19 6.80 -51.93 -0.35 -0.54 16 46 H 0.10 -0.10 8.09 -51.93 -0.42 -0.52 16 47 H 0.09 -0.23 8.10 -51.93 -0.42 -0.65 16 48 H 0.12 -0.26 6.36 -52.49 -0.33 -0.60 16 49 H 0.13 -0.04 8.06 -52.49 -0.42 -0.46 16 LS Contribution 407.70 15.07 6.14 6.14 Total: 0.00 -9.28 407.70 -12.71 -22.00 By element: Atomic # 1 Polarization: -6.46 SS G_CDS: -6.15 Total: -12.61 kcal Atomic # 6 Polarization: 1.86 SS G_CDS: -6.76 Total: -4.90 kcal Atomic # 7 Polarization: 0.93 SS G_CDS: -0.38 Total: 0.55 kcal Atomic # 8 Polarization: -3.75 SS G_CDS: -0.37 Total: -4.12 kcal Atomic # 9 Polarization: -0.48 SS G_CDS: 0.04 Total: -0.44 kcal Atomic # 14 Polarization: -1.38 SS G_CDS: -5.24 Total: -6.62 kcal Total LS contribution 6.14 Total: 6.14 kcal Total: -9.28 -12.71 -22.00 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13458982_12335838.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 21.687 kcal (2) G-P(sol) polarization free energy of solvation -9.283 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 12.404 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.713 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.996 kcal (6) G-S(sol) free energy of system = (1) + (5) -0.309 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds