Wall clock time and date at job start Sat Mar 6 2021 21:26:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86301 * 109.46905 * 2 1 4 4 C 1.50696 * 109.47275 * 119.99868 * 2 1 3 5 5 C 1.34454 * 126.48165 * 254.98180 * 4 2 1 6 6 N 1.36571 * 109.98466 * 180.02562 * 5 4 2 7 7 C 1.37826 * 109.85743 * 0.22341 * 6 5 4 8 8 C 1.38653 * 133.37548 * 180.42425 * 7 6 5 9 9 C 1.39315 * 119.66666 * 179.62307 * 8 7 6 10 10 C 1.47582 * 119.83022 * 179.77141 * 9 8 7 11 11 O 1.21590 * 120.00346 * 359.97438 * 10 9 8 12 12 N 1.34780 * 119.99872 * 179.97438 * 10 9 8 13 13 C 1.46503 * 120.00249 * 180.02562 * 12 10 9 14 14 C 1.52999 * 109.47383 * 175.92235 * 13 12 10 15 15 C 1.50697 * 112.84677 * 65.11179 * 14 13 12 16 16 C 1.38239 * 120.00116 * 245.83883 * 15 14 13 17 17 C 1.38235 * 119.99952 * 179.79056 * 16 15 14 18 18 C 1.38228 * 119.99905 * 0.44454 * 17 16 15 19 19 C 1.38235 * 120.00196 * 359.80783 * 18 17 16 20 20 C 1.38230 * 119.99958 * 359.97438 * 19 18 17 21 21 C 1.53787 * 113.61357 * 293.91817 * 14 13 12 22 22 C 1.53783 * 87.07887 * 270.88325 * 21 14 13 23 23 H 1.09001 * 113.61678 * 89.11550 * 22 21 14 24 24 F 1.39901 * 113.61126 * 219.93591 * 22 21 14 25 25 C 1.53775 * 113.61485 * 196.31191 * 14 13 12 26 26 C 1.40199 * 120.33856 * 359.75513 * 9 8 7 27 27 C 1.36238 * 120.37458 * 359.97438 * 26 9 8 28 28 C 1.39873 * 119.96032 * 0.02562 * 27 26 9 29 29 H 0.96698 * 113.99923 * 299.99497 * 1 2 3 30 30 H 1.08996 * 109.47165 * 240.00145 * 2 1 3 31 31 H 1.48503 * 109.99809 * 299.99782 * 3 2 1 32 32 H 1.48504 * 110.00120 * 61.31813 * 3 2 1 33 33 H 1.07999 * 125.00928 * 359.97438 * 5 4 2 34 34 H 0.96997 * 125.07153 * 179.97438 * 6 5 4 35 35 H 1.07999 * 120.16408 * 359.39288 * 8 7 6 36 36 H 0.97005 * 119.99727 * 359.97438 * 12 10 9 37 37 H 1.09002 * 109.46766 * 295.92484 * 13 12 10 38 38 H 1.09005 * 109.46691 * 55.92246 * 13 12 10 39 39 H 1.08007 * 119.99909 * 0.02562 * 16 15 14 40 40 H 1.07998 * 119.99564 * 180.27362 * 17 16 15 41 41 H 1.08010 * 119.99748 * 179.83789 * 18 17 16 42 42 H 1.08001 * 119.99599 * 180.02562 * 19 18 17 43 43 H 1.08001 * 119.99788 * 179.97438 * 20 19 18 44 44 H 1.08997 * 113.61684 * 25.42986 * 21 14 13 45 45 H 1.08998 * 113.61080 * 156.33729 * 21 14 13 46 46 H 1.08995 * 113.61356 * 203.66747 * 25 14 13 47 47 H 1.09004 * 113.61319 * 334.56544 * 25 14 13 48 48 H 1.07995 * 119.81548 * 180.02562 * 26 9 8 49 49 H 1.08002 * 120.01482 * 179.97438 * 27 26 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.4620 -0.1362 2.3243 6 7 2.8043 -1.0947 3.2350 7 6 2.5001 -2.3434 2.7373 8 6 2.6320 -3.6279 3.2424 9 6 2.2139 -4.7154 2.4787 10 6 2.3573 -6.0845 3.0107 11 8 2.8397 -6.2612 4.1127 12 7 1.9534 -7.1391 2.2750 13 6 2.0952 -8.4982 2.8032 14 6 1.4729 -9.4942 1.8225 15 6 2.1991 -9.5475 0.5031 16 6 1.5679 -9.1227 -0.6510 17 6 2.2356 -9.1676 -1.8606 18 6 3.5312 -9.6460 -1.9175 19 6 4.1606 -10.0757 -0.7642 20 6 3.4946 -10.0266 0.4461 21 6 -0.0515 -9.3489 1.6812 22 6 -0.1753 -10.3408 2.8499 23 1 -0.1826 -9.8628 3.8294 24 9 -1.2104 -11.2684 2.6903 25 6 1.2076 -10.8790 2.4362 26 6 1.6573 -4.5159 1.2075 27 6 1.5190 -3.2568 0.7059 28 6 1.9341 -2.1547 1.4606 29 1 -0.3933 0.4416 0.7651 30 1 1.7924 -0.5138 -0.8900 31 1 1.5615 2.4679 -1.2086 32 1 1.5878 2.4586 1.2242 33 1 2.5983 0.9262 2.4622 34 1 3.2054 -0.9225 4.1013 35 1 3.0602 -3.7847 4.2214 36 1 1.5682 -6.9982 1.3959 37 1 3.1525 -8.7289 2.9335 38 1 1.5867 -8.5691 3.7648 39 1 0.5544 -8.7520 -0.6070 40 1 1.7439 -8.8315 -2.7615 41 1 4.0519 -9.6835 -2.8630 42 1 5.1731 -10.4491 -0.8087 43 1 3.9862 -10.3628 1.3470 44 1 -0.4185 -8.3497 1.9158 45 1 -0.4412 -9.7337 0.7388 46 1 1.1614 -11.6812 1.6998 47 1 1.8564 -11.1143 3.2799 48 1 1.3357 -5.3651 0.6228 49 1 1.0899 -3.1098 -0.2743 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13458982_12335838.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:26:28 Heat of formation + Delta-G solvation = 3.224378 kcal Electronic energy + Delta-G solvation = -34268.490436 eV Core-core repulsion = 29656.663477 eV Total energy + Delta-G solvation = -4611.826960 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 381.153 amu Computer time = 1.15 seconds Orbital eigenvalues (eV) -48.58397 -42.46761 -41.65484 -40.47612 -38.77652 -37.96904 -37.50269 -35.43000 -33.26405 -32.06219 -31.83799 -30.93265 -30.71503 -28.43150 -27.10670 -26.45608 -25.28030 -24.14722 -23.64087 -23.19821 -22.50576 -21.45931 -20.82874 -20.02483 -19.33362 -18.52052 -18.25185 -17.72849 -17.39611 -17.09811 -16.97422 -16.56968 -16.33469 -16.19676 -16.01135 -15.78199 -15.61801 -15.50884 -15.33694 -15.13823 -15.00518 -14.77293 -14.56027 -14.43204 -14.39701 -14.26476 -13.88976 -13.65464 -13.52849 -13.36609 -13.07055 -12.63852 -12.50952 -12.48648 -12.43163 -12.21487 -12.17809 -11.78331 -11.76757 -11.33581 -11.27190 -11.14863 -10.78686 -10.44607 -10.21797 -9.81353 -9.63789 -9.36386 -8.79595 -4.82908 -0.32101 0.37395 0.41767 0.50446 1.39196 1.40541 1.64801 1.87034 1.89403 2.05391 2.22429 2.83174 2.87098 3.13210 3.24124 3.42299 3.51472 3.56466 3.60509 3.65042 3.72580 3.86590 3.87665 3.91551 4.10447 4.12785 4.13759 4.20875 4.30022 4.31317 4.48172 4.49396 4.51992 4.60184 4.63092 4.64977 4.66770 4.70373 4.72539 4.80915 4.85828 4.95174 4.98136 5.10413 5.15842 5.21042 5.27031 5.28331 5.41912 5.50965 5.59102 5.61913 5.64885 5.65689 5.98251 6.10717 6.41323 6.52194 6.62845 7.09549 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.553 6.553 2 C -0.048 4.048 3 Si 0.773 3.227 4 C -0.224 4.224 5 C 0.090 3.910 6 N -0.577 5.577 7 C 0.068 3.932 8 C -0.066 4.066 9 C -0.136 4.136 10 C 0.563 3.437 11 O -0.579 6.579 12 N -0.707 5.707 13 C 0.147 3.853 14 C -0.041 4.041 15 C -0.073 4.073 16 C -0.123 4.123 17 C -0.124 4.124 18 C -0.132 4.132 19 C -0.129 4.129 20 C -0.121 4.121 21 C -0.148 4.148 22 C 0.055 3.945 23 H 0.122 0.878 24 F -0.223 7.223 25 C -0.136 4.136 26 C -0.108 4.108 27 C -0.082 4.082 28 C -0.079 4.079 29 H 0.384 0.616 30 H 0.113 0.887 31 H -0.309 1.309 32 H -0.268 1.268 33 H 0.207 0.793 34 H 0.434 0.566 35 H 0.130 0.870 36 H 0.411 0.589 37 H 0.070 0.930 38 H 0.079 0.921 39 H 0.140 0.860 40 H 0.137 0.863 41 H 0.132 0.868 42 H 0.130 0.870 43 H 0.126 0.874 44 H 0.094 0.906 45 H 0.106 0.894 46 H 0.097 0.903 47 H 0.097 0.903 48 H 0.146 0.854 49 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.573 3.560 -1.789 4.743 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.361 6.361 2 C -0.157 4.157 3 Si 0.677 3.323 4 C -0.232 4.232 5 C -0.039 4.039 6 N -0.180 5.180 7 C -0.039 4.039 8 C -0.087 4.087 9 C -0.140 4.140 10 C 0.352 3.648 11 O -0.461 6.461 12 N -0.359 5.359 13 C 0.023 3.977 14 C -0.042 4.042 15 C -0.073 4.073 16 C -0.141 4.141 17 C -0.142 4.142 18 C -0.150 4.150 19 C -0.147 4.147 20 C -0.139 4.139 21 C -0.186 4.186 22 C 0.019 3.981 23 H 0.140 0.860 24 F -0.204 7.204 25 C -0.174 4.174 26 C -0.128 4.128 27 C -0.101 4.101 28 C -0.085 4.085 29 H 0.232 0.768 30 H 0.131 0.869 31 H -0.237 1.237 32 H -0.194 1.194 33 H 0.224 0.776 34 H 0.274 0.726 35 H 0.147 0.853 36 H 0.249 0.751 37 H 0.088 0.912 38 H 0.097 0.903 39 H 0.157 0.843 40 H 0.155 0.845 41 H 0.150 0.850 42 H 0.148 0.852 43 H 0.144 0.856 44 H 0.113 0.887 45 H 0.124 0.876 46 H 0.116 0.884 47 H 0.116 0.884 48 H 0.164 0.836 49 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges 2.822 3.920 -1.423 5.036 hybrid contribution -1.037 -0.368 0.489 1.204 sum 1.785 3.552 -0.934 4.084 Atomic orbital electron populations 1.86575 1.19155 1.80473 1.49918 1.24562 0.82719 1.11330 0.97119 0.94157 0.89992 0.71138 0.76996 1.20753 1.11927 0.91482 0.98999 1.22288 0.97671 0.95591 0.88371 1.41800 1.54176 1.03254 1.18754 1.18118 1.03802 0.86798 0.95154 1.20125 0.99793 0.88751 1.00042 1.19441 1.06144 0.91797 0.96631 1.18311 0.77065 0.85287 0.84149 1.90771 1.46557 1.86799 1.21951 1.45667 1.63478 1.05458 1.21300 1.21159 1.01205 0.79490 0.95838 1.20566 0.94592 0.96159 0.92861 1.19474 0.94287 0.99790 0.93741 1.21305 1.00703 1.00197 0.91915 1.21426 0.94981 0.99258 0.98546 1.21458 0.95714 0.98847 0.98982 1.21386 1.00618 0.99857 0.92849 1.21134 0.94573 0.99826 0.98363 1.23771 0.94092 1.01106 0.99604 1.23405 0.84334 0.89115 1.01224 0.85990 1.92786 1.61852 1.68691 1.97075 1.23663 0.95765 0.95947 1.02051 1.20848 0.99784 0.97989 0.94132 1.20387 0.98974 0.90601 1.00103 1.19532 1.00877 0.94134 0.93914 0.76752 0.86902 1.23729 1.19396 0.77644 0.72557 0.85251 0.75076 0.91154 0.90326 0.84259 0.84516 0.85048 0.85193 0.85600 0.88745 0.87584 0.88403 0.88439 0.83644 0.84355 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -1.07 12.88 -148.98 -1.92 -2.99 16 2 C -0.05 0.08 3.06 71.23 0.22 0.30 16 3 Si 0.77 -3.81 30.82 68.60 2.11 -1.70 16 4 C -0.22 0.21 5.57 -18.64 -0.10 0.10 16 5 C 0.09 -0.46 10.43 83.09 0.87 0.41 16 6 N -0.58 2.03 6.07 -187.71 -1.14 0.89 16 7 C 0.07 0.18 7.26 38.96 0.28 0.46 16 8 C -0.07 -0.32 9.61 22.63 0.22 -0.11 16 9 C -0.14 -0.61 5.87 -20.08 -0.12 -0.73 16 10 C 0.56 3.57 7.76 86.71 0.67 4.25 16 11 O -0.58 -7.97 16.31 -4.00 -0.07 -8.03 16 12 N -0.71 0.04 5.14 -466.20 -2.40 -2.36 16 13 C 0.15 -0.16 4.84 86.38 0.42 0.26 16 14 C -0.04 0.16 0.63 -52.40 -0.03 0.13 16 15 C -0.07 0.14 4.51 -19.87 -0.09 0.05 16 16 C -0.12 0.33 9.05 22.27 0.20 0.53 16 17 C -0.12 0.22 10.05 22.27 0.22 0.44 16 18 C -0.13 0.08 10.05 22.27 0.22 0.30 16 19 C -0.13 0.00 10.05 22.27 0.22 0.22 16 20 C -0.12 0.04 9.34 22.27 0.21 0.25 16 21 C -0.15 0.64 6.10 31.12 0.19 0.83 16 22 C 0.05 -0.10 5.32 31.21 0.17 0.07 16 23 H 0.12 -0.51 7.61 -2.39 -0.02 -0.52 16 24 F -0.22 -1.14 17.41 44.97 0.78 -0.35 16 25 C -0.14 0.45 7.02 31.21 0.22 0.66 16 26 C -0.11 -0.07 9.46 22.28 0.21 0.14 16 27 C -0.08 -0.15 10.03 22.20 0.22 0.07 16 28 C -0.08 -0.24 6.35 -20.14 -0.13 -0.37 16 29 H 0.38 -1.47 8.70 -74.06 -0.64 -2.12 16 30 H 0.11 -0.22 7.96 -2.39 -0.02 -0.24 16 31 H -0.31 -1.26 7.11 99.48 0.71 -0.55 16 32 H -0.27 0.95 7.00 99.48 0.70 1.65 16 33 H 0.21 -2.44 6.27 -2.91 -0.02 -2.46 16 34 H 0.43 -3.88 8.96 -92.71 -0.83 -4.71 16 35 H 0.13 0.69 7.62 -2.91 -0.02 0.66 16 36 H 0.41 -1.63 6.21 -92.70 -0.58 -2.21 16 37 H 0.07 0.06 7.97 -2.39 -0.02 0.04 16 38 H 0.08 -0.05 7.31 -2.38 -0.02 -0.07 16 39 H 0.14 -0.89 6.41 -2.91 -0.02 -0.90 16 40 H 0.14 -0.69 8.06 -2.91 -0.02 -0.72 16 41 H 0.13 -0.43 8.06 -2.91 -0.02 -0.46 16 42 H 0.13 -0.31 8.06 -2.91 -0.02 -0.33 16 43 H 0.13 -0.25 8.06 -2.91 -0.02 -0.28 16 44 H 0.09 -0.55 7.95 -2.39 -0.02 -0.57 16 45 H 0.11 -0.46 6.80 -2.39 -0.02 -0.47 16 46 H 0.10 -0.17 8.09 -2.39 -0.02 -0.19 16 47 H 0.10 -0.50 8.10 -2.38 -0.02 -0.52 16 48 H 0.15 -0.71 6.36 -2.91 -0.02 -0.73 16 49 H 0.14 -0.07 8.06 -2.91 -0.02 -0.09 16 Total: 0.00 -22.75 407.70 0.68 -22.08 By element: Atomic # 1 Polarization: -14.80 SS G_CDS: -0.99 Total: -15.79 kcal Atomic # 6 Polarization: 3.96 SS G_CDS: 4.29 Total: 8.26 kcal Atomic # 7 Polarization: 2.06 SS G_CDS: -3.54 Total: -1.47 kcal Atomic # 8 Polarization: -9.03 SS G_CDS: -1.98 Total: -11.02 kcal Atomic # 9 Polarization: -1.14 SS G_CDS: 0.78 Total: -0.35 kcal Atomic # 14 Polarization: -3.81 SS G_CDS: 2.11 Total: -1.70 kcal Total: -22.75 0.68 -22.08 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13458982_12335838.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 25.300 kcal (2) G-P(sol) polarization free energy of solvation -22.754 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 2.545 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.679 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.075 kcal (6) G-S(sol) free energy of system = (1) + (5) 3.224 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.15 seconds