Wall clock time and date at job start Sat Mar 6 2021 21:26:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42896 * 1 3 3 Si 1.86301 * 109.47180 * 2 1 4 4 C 1.50700 * 109.46924 * 240.00481 * 2 1 3 5 5 C 1.37945 * 119.92026 * 299.72195 * 4 2 1 6 6 C 1.39594 * 119.87240 * 179.71006 * 5 4 2 7 7 C 1.47852 * 120.14050 * 180.27017 * 6 5 4 8 8 O 1.21552 * 119.99931 * 0.29702 * 7 6 5 9 9 N 1.34781 * 120.00274 * 180.29140 * 7 6 5 10 10 C 1.46496 * 119.99965 * 179.97438 * 9 7 6 11 11 C 1.53000 * 109.46923 * 179.03872 * 10 9 7 12 12 C 1.50700 * 112.85104 * 66.14762 * 11 10 9 13 13 C 1.38238 * 120.00113 * 245.83104 * 12 11 10 14 14 C 1.38231 * 119.99911 * 179.76371 * 13 12 11 15 15 C 1.38236 * 119.99838 * 0.50751 * 14 13 12 16 16 C 1.38237 * 120.00278 * 359.73917 * 15 14 13 17 17 C 1.38228 * 119.99770 * 0.02562 * 16 15 14 18 18 C 1.53785 * 113.61700 * 294.95089 * 11 10 9 19 19 C 1.53786 * 87.08123 * 270.88545 * 18 11 10 20 20 H 1.08998 * 113.61447 * 89.11316 * 19 18 11 21 21 F 1.39895 * 113.61161 * 220.01989 * 19 18 11 22 22 C 1.53780 * 113.61313 * 197.45469 * 11 10 9 23 23 C 1.39542 * 119.72055 * 0.56411 * 6 5 4 24 24 C 1.38066 * 119.84378 * 359.73209 * 23 6 5 25 25 Br 1.89105 * 119.93952 * 180.02562 * 24 23 6 26 26 C 1.38362 * 119.92630 * 119.99896 * 4 2 1 27 27 H 0.96696 * 114.00080 * 59.99767 * 1 2 3 28 28 H 1.08996 * 109.47742 * 120.00469 * 2 1 3 29 29 H 1.48499 * 109.99979 * 298.68344 * 3 2 1 30 30 H 1.48500 * 110.00063 * 59.99992 * 3 2 1 31 31 H 1.07998 * 120.06181 * 359.97438 * 5 4 2 32 32 H 0.97003 * 119.99850 * 0.02562 * 9 7 6 33 33 H 1.08996 * 109.47400 * 299.04284 * 10 9 7 34 34 H 1.09008 * 109.46636 * 59.04320 * 10 9 7 35 35 H 1.07997 * 119.99767 * 359.97438 * 13 12 11 36 36 H 1.07998 * 120.00131 * 180.22980 * 14 13 12 37 37 H 1.08001 * 119.99855 * 179.72951 * 15 14 13 38 38 H 1.07998 * 119.99934 * 179.97438 * 16 15 14 39 39 H 1.08002 * 120.00519 * 179.97438 * 17 16 15 40 40 H 1.08998 * 113.61175 * 25.43293 * 18 11 10 41 41 H 1.09000 * 113.61400 * 156.33548 * 18 11 10 42 42 H 1.09002 * 113.61201 * 203.66713 * 22 11 10 43 43 H 1.08992 * 113.61697 * 334.56534 * 22 11 10 44 44 H 1.08005 * 120.08012 * 179.70980 * 23 6 5 45 45 H 1.07999 * 119.85524 * 359.97438 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9312 -0.7103 -1.2305 5 6 1.6017 -2.0326 -1.4444 6 6 2.0625 -2.6879 -2.5876 7 6 1.7079 -4.1034 -2.8257 8 8 1.0093 -4.6974 -2.0279 9 7 2.1592 -4.7350 -3.9275 10 6 1.8083 -6.1377 -4.1631 11 6 2.4235 -6.6022 -5.4848 12 6 3.9297 -6.6357 -5.4494 13 6 4.6591 -5.7735 -6.2466 14 6 6.0407 -5.8008 -6.2105 15 6 6.6929 -6.6976 -5.3850 16 6 5.9635 -7.5633 -4.5917 17 6 4.5819 -7.5326 -4.6241 18 6 1.8521 -5.8814 -6.7173 19 6 0.7806 -6.9834 -6.7672 20 1 -0.1068 -6.7566 -6.1763 21 9 0.4766 -7.4110 -8.0641 22 6 1.7897 -7.8883 -6.0408 23 6 2.8643 -2.0031 -3.5017 24 6 3.1921 -0.6816 -3.2730 25 35 4.2778 0.2492 -4.5103 26 6 2.7266 -0.0364 -2.1403 27 1 -0.3933 0.4417 -0.7650 28 1 1.7924 -0.5139 0.8899 29 1 1.5878 2.4586 -1.2242 30 1 1.5615 2.4679 1.2085 31 1 0.9849 -2.5587 -0.7309 32 1 2.7169 -4.2611 -4.5641 33 1 2.1932 -6.7504 -3.3480 34 1 0.7239 -6.2376 -4.2121 35 1 4.1496 -5.0762 -6.8950 36 1 6.6106 -5.1247 -6.8305 37 1 7.7723 -6.7220 -5.3601 38 1 6.4731 -8.2642 -3.9471 39 1 4.0120 -8.2092 -4.0046 40 1 1.4510 -4.8920 -6.4975 41 1 2.5235 -5.8860 -7.5759 42 1 2.4441 -8.4415 -6.7146 43 1 1.3383 -8.5190 -5.2751 44 1 3.2278 -2.5058 -4.3858 45 1 2.9850 0.9977 -1.9660 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13458982_12335870.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:26:54 Heat of formation + Delta-G solvation = -23.862473 kcal Electronic energy + Delta-G solvation = -31528.409708 eV Core-core repulsion = 27053.005983 eV Total energy + Delta-G solvation = -4475.403726 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 420.052 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -48.58966 -41.89312 -41.14315 -39.89334 -38.75550 -37.82496 -35.57409 -33.62408 -33.17418 -32.00898 -31.84446 -30.46181 -28.80888 -27.14764 -27.01283 -25.52767 -24.42880 -23.21051 -22.82989 -22.51214 -21.51085 -20.09639 -19.09318 -18.44787 -17.95268 -17.68773 -17.46840 -17.23655 -16.63212 -16.50926 -16.44594 -16.19218 -16.01120 -15.84579 -15.52552 -15.48578 -15.04024 -14.98050 -14.64279 -14.60291 -14.28206 -14.24413 -14.07815 -13.65351 -13.52670 -13.37616 -13.29437 -13.03471 -12.52468 -12.44358 -12.30576 -12.19662 -11.97127 -11.84200 -11.79132 -11.49145 -11.35138 -11.28076 -11.22362 -10.73433 -10.42776 -10.15171 -9.91081 -9.81811 -9.64442 -4.97426 -0.52688 -0.17044 0.41085 0.42999 0.49977 1.20422 1.51298 1.55137 1.85617 1.94642 2.45283 2.82335 3.12238 3.19878 3.24272 3.32945 3.41674 3.43082 3.56794 3.60822 3.80229 3.85911 3.86962 3.95544 4.11059 4.13176 4.18784 4.20953 4.28723 4.31118 4.47127 4.54265 4.60249 4.63561 4.66231 4.68726 4.71872 4.75299 4.84400 4.91806 4.94374 5.06731 5.10196 5.15094 5.19591 5.26473 5.37412 5.58686 5.63939 5.65518 6.10140 6.29311 6.42423 6.97711 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.545 6.545 2 C -0.083 4.083 3 Si 0.760 3.240 4 C -0.113 4.113 5 C -0.028 4.028 6 C -0.136 4.136 7 C 0.561 3.439 8 O -0.569 6.569 9 N -0.706 5.706 10 C 0.146 3.854 11 C -0.042 4.042 12 C -0.073 4.073 13 C -0.123 4.123 14 C -0.124 4.124 15 C -0.132 4.132 16 C -0.129 4.129 17 C -0.121 4.121 18 C -0.148 4.148 19 C 0.055 3.945 20 H 0.123 0.877 21 F -0.223 7.223 22 C -0.137 4.137 23 C -0.045 4.045 24 C -0.098 4.098 25 Br -0.028 7.028 26 C -0.061 4.061 27 H 0.388 0.612 28 H 0.131 0.869 29 H -0.273 1.273 30 H -0.297 1.297 31 H 0.133 0.867 32 H 0.411 0.589 33 H 0.072 0.928 34 H 0.081 0.919 35 H 0.141 0.859 36 H 0.137 0.863 37 H 0.131 0.869 38 H 0.129 0.871 39 H 0.125 0.875 40 H 0.096 0.904 41 H 0.106 0.894 42 H 0.097 0.903 43 H 0.096 0.904 44 H 0.157 0.843 45 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.926 1.985 -2.162 5.734 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.353 6.353 2 C -0.191 4.191 3 Si 0.664 3.336 4 C -0.114 4.114 5 C -0.048 4.048 6 C -0.140 4.140 7 C 0.349 3.651 8 O -0.450 6.450 9 N -0.358 5.358 10 C 0.023 3.977 11 C -0.042 4.042 12 C -0.073 4.073 13 C -0.140 4.140 14 C -0.142 4.142 15 C -0.150 4.150 16 C -0.147 4.147 17 C -0.139 4.139 18 C -0.186 4.186 19 C 0.019 3.981 20 H 0.141 0.859 21 F -0.204 7.204 22 C -0.175 4.175 23 C -0.065 4.065 24 C -0.178 4.178 25 Br 0.058 6.942 26 C -0.080 4.080 27 H 0.237 0.763 28 H 0.149 0.851 29 H -0.199 1.199 30 H -0.225 1.225 31 H 0.150 0.850 32 H 0.249 0.751 33 H 0.090 0.910 34 H 0.099 0.901 35 H 0.158 0.842 36 H 0.155 0.845 37 H 0.149 0.851 38 H 0.147 0.853 39 H 0.143 0.857 40 H 0.115 0.885 41 H 0.125 0.875 42 H 0.116 0.884 43 H 0.115 0.885 44 H 0.175 0.825 45 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges 4.715 2.382 -1.589 5.516 hybrid contribution -1.094 -0.484 -0.448 1.277 sum 3.621 1.899 -2.037 4.568 Atomic orbital electron populations 1.86613 1.18111 1.80337 1.50245 1.25284 0.83747 1.11988 0.98099 0.94198 0.90280 0.71770 0.77374 1.20267 0.99300 0.94208 0.97666 1.21254 0.94789 0.93531 0.95177 1.19858 1.02778 0.93730 0.97601 1.18274 0.79328 0.86340 0.81164 1.90811 1.39405 1.68099 1.46637 1.45687 1.53026 1.13112 1.23991 1.21189 1.00070 0.81159 0.95311 1.20567 0.91391 0.98354 0.93909 1.19470 0.93394 0.96949 0.97502 1.21300 0.94129 0.99332 0.99284 1.21427 0.94839 0.98954 0.98937 1.21456 1.00848 0.96025 0.96642 1.21383 0.94331 0.99488 0.99542 1.21133 0.94710 0.99004 0.99075 1.23785 0.97480 0.99202 0.98103 1.23356 0.98581 0.96877 0.79250 0.85915 1.92788 1.95078 1.91165 1.41396 1.23622 0.97368 0.96102 1.00442 1.21420 0.94116 0.92457 0.98534 1.21724 1.03004 0.95734 0.97306 1.96861 1.65627 1.75255 1.56470 1.21382 0.94493 1.00573 0.91556 0.76260 0.85110 1.19889 1.22506 0.84957 0.75095 0.90978 0.90128 0.84151 0.84508 0.85110 0.85285 0.85660 0.88529 0.87532 0.88445 0.88506 0.82529 0.82616 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.78 12.77 -148.98 -1.90 -2.69 16 2 C -0.08 0.18 2.82 71.24 0.20 0.38 16 3 Si 0.76 -2.94 29.78 68.60 2.04 -0.89 16 4 C -0.11 0.19 5.38 -19.90 -0.11 0.09 16 5 C -0.03 -0.05 9.16 22.53 0.21 0.16 16 6 C -0.14 -0.08 5.87 -20.09 -0.12 -0.20 16 7 C 0.56 1.92 7.77 86.79 0.67 2.59 16 8 O -0.57 -6.61 16.35 -3.88 -0.06 -6.67 16 9 N -0.71 1.93 5.11 -465.96 -2.38 -0.45 16 10 C 0.15 -0.45 4.85 86.38 0.42 -0.04 16 11 C -0.04 0.23 0.63 -52.40 -0.03 0.20 16 12 C -0.07 0.25 4.61 -19.86 -0.09 0.16 16 13 C -0.12 0.52 9.05 22.27 0.20 0.72 16 14 C -0.12 0.38 10.05 22.27 0.22 0.60 16 15 C -0.13 0.21 10.05 22.27 0.22 0.44 16 16 C -0.13 0.12 10.05 22.27 0.22 0.34 16 17 C -0.12 0.18 9.33 22.27 0.21 0.38 16 18 C -0.15 0.93 6.03 31.12 0.19 1.11 16 19 C 0.06 -0.18 5.32 31.12 0.17 -0.01 16 20 H 0.12 -0.71 7.61 -2.39 -0.02 -0.73 16 21 F -0.22 -0.87 17.41 44.97 0.78 -0.08 16 22 C -0.14 0.62 7.00 31.12 0.22 0.84 16 23 C -0.04 0.16 9.28 22.54 0.21 0.37 16 24 C -0.10 0.30 6.22 22.27 0.14 0.44 16 25 Br -0.03 0.09 33.69 -20.37 -0.69 -0.59 16 26 C -0.06 0.21 8.41 22.34 0.19 0.40 16 27 H 0.39 -1.73 8.70 -74.06 -0.64 -2.38 16 28 H 0.13 -0.47 7.96 -2.39 -0.02 -0.49 16 29 H -0.27 0.24 7.11 99.48 0.71 0.94 16 30 H -0.30 -1.22 7.11 99.48 0.71 -0.51 16 31 H 0.13 0.65 7.65 -2.91 -0.02 0.63 16 32 H 0.41 -2.89 6.25 -92.71 -0.58 -3.47 16 33 H 0.07 -0.06 7.95 -2.39 -0.02 -0.08 16 34 H 0.08 -0.23 7.31 -2.38 -0.02 -0.25 16 35 H 0.14 -1.15 6.41 -2.91 -0.02 -1.17 16 36 H 0.14 -0.86 8.06 -2.91 -0.02 -0.88 16 37 H 0.13 -0.54 8.06 -2.91 -0.02 -0.57 16 38 H 0.13 -0.40 8.06 -2.91 -0.02 -0.43 16 39 H 0.13 -0.37 8.06 -2.91 -0.02 -0.40 16 40 H 0.10 -0.81 7.89 -2.39 -0.02 -0.83 16 41 H 0.11 -0.65 6.79 -2.39 -0.02 -0.66 16 42 H 0.10 -0.27 8.10 -2.39 -0.02 -0.29 16 43 H 0.10 -0.60 8.10 -2.39 -0.02 -0.62 16 44 H 0.16 -1.30 6.41 -2.91 -0.02 -1.32 16 45 H 0.16 -1.05 4.86 -2.91 -0.01 -1.06 16 Total: 0.00 -17.95 395.38 1.01 -16.95 By element: Atomic # 1 Polarization: -14.42 SS G_CDS: -0.12 Total: -14.55 kcal Atomic # 6 Polarization: 5.63 SS G_CDS: 3.34 Total: 8.97 kcal Atomic # 7 Polarization: 1.93 SS G_CDS: -2.38 Total: -0.45 kcal Atomic # 8 Polarization: -7.39 SS G_CDS: -1.97 Total: -9.36 kcal Atomic # 9 Polarization: -0.87 SS G_CDS: 0.78 Total: -0.08 kcal Atomic # 14 Polarization: -2.94 SS G_CDS: 2.04 Total: -0.89 kcal Atomic # 35 Polarization: 0.09 SS G_CDS: -0.69 Total: -0.59 kcal Total: -17.95 1.01 -16.95 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13458982_12335870.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -6.917 kcal (2) G-P(sol) polarization free energy of solvation -17.953 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -24.870 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.007 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.946 kcal (6) G-S(sol) free energy of system = (1) + (5) -23.862 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds