Wall clock time and date at job start Sat Mar 6 2021 21:27:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86301 * 109.46840 * 2 1 4 4 C 1.50698 * 109.47211 * 119.99717 * 2 1 3 5 5 C 1.38399 * 119.82402 * 65.00148 * 4 2 1 6 6 C 1.37900 * 120.17015 * 180.02562 * 5 4 2 7 7 C 1.39835 * 119.82406 * 359.97438 * 6 5 4 8 8 C 1.47205 * 120.16807 * 179.97438 * 7 6 5 9 9 C 1.34813 * 119.99824 * 179.97438 * 8 7 6 10 10 C 1.46428 * 119.99818 * 180.02562 * 9 8 7 11 11 O 1.21700 * 120.00122 * 0.02562 * 10 9 8 12 12 N 1.34776 * 120.00072 * 180.02562 * 10 9 8 13 13 C 1.46504 * 120.00168 * 180.02562 * 12 10 9 14 14 C 1.53001 * 109.46948 * 184.98323 * 13 12 10 15 15 C 1.50705 * 112.84875 * 59.65560 * 14 13 12 16 16 C 1.38237 * 119.99781 * 257.12546 * 15 14 13 17 17 C 1.38230 * 119.99994 * 179.97438 * 16 15 14 18 18 C 1.38234 * 120.00158 * 359.96932 * 17 16 15 19 19 C 1.38240 * 119.99875 * 0.02562 * 18 17 16 20 20 C 1.38230 * 119.99996 * 77.07824 * 15 14 13 21 21 C 1.53777 * 113.69036 * 288.38545 * 14 13 12 22 22 C 1.53777 * 87.08082 * 270.87282 * 21 14 13 23 23 H 1.08998 * 113.61820 * 89.11860 * 22 21 14 24 24 F 1.39906 * 113.61837 * 220.02171 * 22 21 14 25 25 C 1.53779 * 113.61379 * 190.84591 * 14 13 12 26 26 C 1.39838 * 119.66124 * 0.25523 * 7 6 5 27 27 C 1.37894 * 119.82373 * 359.48699 * 26 7 6 28 28 H 0.96700 * 114.00121 * 60.00331 * 1 2 3 29 29 H 1.09001 * 109.47061 * 240.00379 * 2 1 3 30 30 H 1.48502 * 109.99869 * 298.67713 * 3 2 1 31 31 H 1.48495 * 110.00222 * 59.99788 * 3 2 1 32 32 H 1.07999 * 119.92065 * 0.02562 * 5 4 2 33 33 H 1.07993 * 120.08528 * 179.97438 * 6 5 4 34 34 H 1.08000 * 119.99973 * 0.02562 * 8 7 6 35 35 H 1.08000 * 120.00202 * 0.02562 * 9 8 7 36 36 H 0.97006 * 119.99684 * 0.02562 * 12 10 9 37 37 H 1.08995 * 109.46777 * 64.98490 * 13 12 10 38 38 H 1.08996 * 109.46638 * 304.98225 * 13 12 10 39 39 H 1.07997 * 120.00014 * 0.25144 * 16 15 14 40 40 H 1.08003 * 120.00355 * 179.97438 * 17 16 15 41 41 H 1.07995 * 120.00602 * 180.02562 * 18 17 16 42 42 H 1.07998 * 120.00127 * 179.97438 * 19 18 17 43 43 H 1.07996 * 120.00279 * 0.06383 * 20 15 14 44 44 H 1.08991 * 113.61788 * 25.42557 * 21 14 13 45 45 H 1.09002 * 113.61127 * 156.32436 * 21 14 13 46 46 H 1.08993 * 113.61747 * 203.74662 * 25 14 13 47 47 H 1.09000 * 113.61374 * 334.66176 * 25 14 13 48 48 H 1.08001 * 120.08624 * 179.72335 * 26 7 6 49 49 H 1.08003 * 119.91531 * 180.24872 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7103 1.2305 5 6 1.6824 -2.0618 1.3949 6 6 2.1383 -2.7188 2.5184 7 6 2.8543 -2.0160 3.4925 8 6 3.3440 -2.7097 4.6950 9 6 4.0343 -2.0289 5.6317 10 6 4.5219 -2.7190 6.8275 11 8 4.3044 -3.9072 6.9756 12 7 5.2116 -2.0384 7.7643 13 6 5.6999 -2.7290 8.9605 14 6 6.3354 -1.7132 9.9120 15 6 5.3717 -0.6417 10.3528 16 6 5.4360 0.6195 9.7904 17 6 4.5517 1.6022 10.1943 18 6 3.6027 1.3236 11.1601 19 6 3.5384 0.0624 11.7224 20 6 4.4229 -0.9203 11.3187 21 6 7.6840 -1.1636 9.4181 22 6 8.3440 -2.3432 10.1514 23 1 8.4417 -3.2390 9.5382 24 9 9.5308 -2.0012 10.8088 25 6 7.1122 -2.3580 11.0720 26 6 3.0975 -0.6496 3.3213 27 6 2.6397 -0.0080 2.1899 28 1 -0.3933 0.4417 -0.7651 29 1 1.7923 -0.5138 -0.8900 30 1 1.5878 2.4585 -1.2243 31 1 1.5614 2.4679 1.2084 32 1 1.1297 -2.6033 0.6415 33 1 1.9429 -3.7733 2.6455 34 1 3.1509 -3.7641 4.8263 35 1 4.2277 -0.9745 5.5001 36 1 5.3846 -1.0912 7.6464 37 1 6.4436 -3.4720 8.6728 38 1 4.8668 -3.2231 9.4602 39 1 6.1741 0.8357 9.0323 40 1 4.6021 2.5877 9.7552 41 1 2.9116 2.0912 11.4754 42 1 2.7973 -0.1551 12.4772 43 1 4.3729 -1.9055 11.7582 44 1 7.8010 -1.2021 8.3352 45 1 7.9391 -0.1906 9.8380 46 1 7.2111 -1.7116 11.9440 47 1 6.7677 -3.3610 11.3241 48 1 3.6459 -0.0992 4.0715 49 1 2.8302 1.0464 2.0542 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13458982_12360594.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:27:02 Heat of formation + Delta-G solvation = -20.430700 kcal Electronic energy + Delta-G solvation = -31605.452042 eV Core-core repulsion = 27186.251372 eV Total energy + Delta-G solvation = -4419.200669 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.157 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -48.53893 -41.70202 -40.71945 -40.15400 -38.85591 -37.90077 -35.35937 -35.09016 -32.29167 -32.10615 -31.95483 -31.44478 -28.90765 -27.30867 -26.87958 -25.16387 -24.10373 -23.57562 -23.27825 -22.62308 -21.85911 -20.71944 -19.77451 -18.65033 -18.57202 -18.42163 -17.66204 -17.34150 -17.01711 -16.70092 -16.59354 -16.29991 -16.03589 -15.97553 -15.67998 -15.51637 -15.40485 -15.26616 -14.80405 -14.60343 -14.41977 -14.39586 -14.33460 -14.04776 -13.88157 -13.72431 -13.65877 -13.57988 -13.43045 -12.99560 -12.61109 -12.49072 -12.32771 -12.27518 -12.09393 -11.92147 -11.73136 -11.43477 -11.37712 -11.30338 -10.93382 -10.56314 -10.12019 -10.01394 -9.90891 -9.73367 -9.26126 -5.04150 -0.55150 0.32876 0.35925 0.40540 0.90759 1.19967 1.52206 1.87871 2.09710 2.30178 2.74136 2.74953 3.01811 3.12753 3.26408 3.31772 3.41718 3.52249 3.58278 3.69499 3.76946 3.78625 3.85939 3.98823 4.00310 4.08131 4.12729 4.15986 4.18176 4.24065 4.32147 4.42622 4.47536 4.49189 4.53004 4.55548 4.58534 4.63323 4.71295 4.79361 4.84329 4.92195 4.99184 5.03223 5.05779 5.10602 5.15952 5.33014 5.39121 5.45467 5.48334 5.54314 5.56021 5.58346 5.84722 5.99084 6.35325 6.48072 7.24084 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.079 4.079 3 Si 0.684 3.316 4 C -0.060 4.060 5 C -0.094 4.094 6 C -0.092 4.092 7 C -0.073 4.073 8 C -0.013 4.013 9 C -0.215 4.215 10 C 0.549 3.451 11 O -0.543 6.543 12 N -0.722 5.722 13 C 0.147 3.853 14 C -0.056 4.056 15 C -0.067 4.067 16 C -0.119 4.119 17 C -0.116 4.116 18 C -0.120 4.120 19 C -0.115 4.115 20 C -0.109 4.109 21 C -0.152 4.152 22 C 0.065 3.935 23 H 0.112 0.888 24 F -0.204 7.204 25 C -0.141 4.141 26 C -0.095 4.095 27 C -0.117 4.117 28 H 0.381 0.619 29 H 0.078 0.922 30 H -0.261 1.261 31 H -0.255 1.255 32 H 0.129 0.871 33 H 0.132 0.868 34 H 0.138 0.862 35 H 0.130 0.870 36 H 0.402 0.598 37 H 0.075 0.925 38 H 0.079 0.921 39 H 0.122 0.878 40 H 0.123 0.877 41 H 0.122 0.878 42 H 0.123 0.877 43 H 0.122 0.878 44 H 0.085 0.915 45 H 0.102 0.898 46 H 0.103 0.897 47 H 0.088 0.912 48 H 0.132 0.868 49 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.417 3.208 -2.362 4.229 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.189 4.189 3 Si 0.585 3.415 4 C -0.060 4.060 5 C -0.112 4.112 6 C -0.110 4.110 7 C -0.074 4.074 8 C -0.033 4.033 9 C -0.236 4.236 10 C 0.338 3.662 11 O -0.422 6.422 12 N -0.373 5.373 13 C 0.023 3.977 14 C -0.056 4.056 15 C -0.067 4.067 16 C -0.137 4.137 17 C -0.134 4.134 18 C -0.138 4.138 19 C -0.133 4.133 20 C -0.127 4.127 21 C -0.189 4.189 22 C 0.029 3.971 23 H 0.130 0.870 24 F -0.185 7.185 25 C -0.179 4.179 26 C -0.113 4.113 27 C -0.135 4.135 28 H 0.229 0.771 29 H 0.096 0.904 30 H -0.186 1.186 31 H -0.179 1.179 32 H 0.147 0.853 33 H 0.150 0.850 34 H 0.156 0.844 35 H 0.148 0.852 36 H 0.237 0.763 37 H 0.093 0.907 38 H 0.097 0.903 39 H 0.140 0.860 40 H 0.141 0.859 41 H 0.140 0.860 42 H 0.141 0.859 43 H 0.140 0.860 44 H 0.104 0.896 45 H 0.121 0.879 46 H 0.121 0.879 47 H 0.106 0.894 48 H 0.150 0.850 49 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges 1.189 2.889 -1.661 3.538 hybrid contribution -1.068 0.457 -0.486 1.260 sum 0.121 3.346 -2.147 3.977 Atomic orbital electron populations 1.86594 1.17644 1.80193 1.49831 1.24849 0.84614 1.11115 0.98319 0.95039 0.91613 0.74554 0.80306 1.19416 0.97608 0.94117 0.94904 1.20975 0.98605 0.93795 0.97835 1.21442 0.96257 1.00192 0.93092 1.19052 0.99859 0.93618 0.94829 1.22403 0.90696 0.99997 0.90188 1.22860 1.04409 1.00838 0.95491 1.18307 0.77813 0.86750 0.83281 1.90842 1.57505 1.15301 1.78573 1.45745 1.57000 1.13439 1.21162 1.21111 0.99090 0.93040 0.84471 1.20780 0.92901 0.95044 0.96881 1.19386 0.96365 0.93820 0.97104 1.21008 0.99511 0.92765 1.00376 1.21169 0.95406 0.99282 0.97506 1.21229 0.98667 0.96999 0.96933 1.21197 0.98876 0.93391 0.99836 1.20980 0.95053 0.99493 0.97203 1.23765 0.93778 0.99496 1.01896 1.23094 0.80130 0.99185 0.94681 0.87016 1.92831 1.49593 1.93575 1.82459 1.23658 0.94036 1.02862 0.97370 1.21326 0.99028 0.93612 0.97285 1.20929 0.99081 0.99625 0.93859 0.77124 0.90391 1.18585 1.17925 0.85316 0.85005 0.84446 0.85229 0.76340 0.90690 0.90256 0.85985 0.85878 0.85994 0.85901 0.86021 0.89629 0.87908 0.87861 0.89363 0.85011 0.85228 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.45 12.81 -35.23 -0.45 -0.90 16 2 C -0.08 0.04 2.79 36.00 0.10 0.14 16 3 Si 0.68 -0.98 29.83 -169.99 -5.07 -6.05 16 4 C -0.06 -0.04 5.39 -104.51 -0.56 -0.60 16 5 C -0.09 -0.07 9.66 -39.65 -0.38 -0.45 16 6 C -0.09 -0.04 9.80 -39.11 -0.38 -0.42 16 7 C -0.07 -0.03 5.87 -105.06 -0.62 -0.65 16 8 C -0.01 -0.01 9.46 -37.16 -0.35 -0.36 16 9 C -0.22 0.03 9.41 -37.50 -0.35 -0.33 16 10 C 0.55 1.02 7.74 -12.96 -0.10 0.92 16 11 O -0.54 -3.14 16.23 5.19 0.08 -3.05 16 12 N -0.72 0.56 5.30 -61.70 -0.33 0.24 16 13 C 0.15 -0.14 4.93 -4.04 -0.02 -0.16 16 14 C -0.06 0.12 0.63 -154.85 -0.10 0.02 16 15 C -0.07 0.07 4.42 -104.62 -0.46 -0.39 16 16 C -0.12 0.16 8.43 -39.58 -0.33 -0.17 16 17 C -0.12 0.09 10.05 -39.59 -0.40 -0.30 16 18 C -0.12 0.03 10.05 -39.58 -0.40 -0.36 16 19 C -0.11 0.01 10.05 -39.58 -0.40 -0.39 16 20 C -0.11 0.03 9.39 -39.58 -0.37 -0.34 16 21 C -0.15 0.36 6.08 -25.92 -0.16 0.20 16 22 C 0.07 -0.08 5.32 -25.92 -0.14 -0.22 16 23 H 0.11 -0.28 7.60 -51.93 -0.39 -0.68 16 24 F -0.20 -0.42 17.41 2.25 0.04 -0.38 16 25 C -0.14 0.27 6.77 -25.92 -0.18 0.09 16 26 C -0.09 0.04 9.41 -39.11 -0.37 -0.33 16 27 C -0.12 0.02 8.65 -39.65 -0.34 -0.33 16 28 H 0.38 -1.19 8.74 45.56 0.40 -0.79 16 29 H 0.08 -0.17 7.96 -51.93 -0.41 -0.59 16 30 H -0.26 -0.17 7.11 56.52 0.40 0.23 16 31 H -0.25 -0.40 7.04 56.52 0.40 0.00 16 32 H 0.13 -0.02 8.06 -52.49 -0.42 -0.45 16 33 H 0.13 -0.16 8.06 -52.49 -0.42 -0.58 16 34 H 0.14 0.15 7.52 -52.49 -0.39 -0.24 16 35 H 0.13 -0.36 6.07 -52.49 -0.32 -0.68 16 36 H 0.40 -1.10 7.68 -40.82 -0.31 -1.42 16 37 H 0.07 -0.07 7.30 -51.93 -0.38 -0.45 16 38 H 0.08 0.03 8.14 -51.93 -0.42 -0.39 16 39 H 0.12 -0.38 7.03 -52.49 -0.37 -0.75 16 40 H 0.12 -0.29 8.06 -52.48 -0.42 -0.71 16 41 H 0.12 -0.20 8.06 -52.49 -0.42 -0.62 16 42 H 0.12 -0.17 8.06 -52.49 -0.42 -0.59 16 43 H 0.12 -0.15 8.03 -52.49 -0.42 -0.57 16 44 H 0.09 -0.27 8.10 -51.93 -0.42 -0.70 16 45 H 0.10 -0.20 7.45 -51.93 -0.39 -0.59 16 46 H 0.10 -0.12 8.09 -51.93 -0.42 -0.54 16 47 H 0.09 -0.24 8.10 -51.93 -0.42 -0.66 16 48 H 0.13 -0.36 6.17 -52.49 -0.32 -0.69 16 49 H 0.13 -0.24 4.84 -52.48 -0.25 -0.49 16 LS Contribution 409.12 15.07 6.17 6.17 Total: 0.00 -8.94 409.12 -12.44 -21.38 By element: Atomic # 1 Polarization: -6.39 SS G_CDS: -6.57 Total: -12.96 kcal Atomic # 6 Polarization: 1.88 SS G_CDS: -6.31 Total: -4.43 kcal Atomic # 7 Polarization: 0.56 SS G_CDS: -0.33 Total: 0.24 kcal Atomic # 8 Polarization: -3.59 SS G_CDS: -0.37 Total: -3.95 kcal Atomic # 9 Polarization: -0.42 SS G_CDS: 0.04 Total: -0.38 kcal Atomic # 14 Polarization: -0.98 SS G_CDS: -5.07 Total: -6.05 kcal Total LS contribution 6.17 Total: 6.17 kcal Total: -8.94 -12.44 -21.38 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13458982_12360594.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 0.949 kcal (2) G-P(sol) polarization free energy of solvation -8.939 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -7.989 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.441 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.380 kcal (6) G-S(sol) free energy of system = (1) + (5) -20.431 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds