Wall clock time and date at job start Sat Mar 6 2021 21:27:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86301 * 109.46960 * 2 1 4 4 C 1.50702 * 109.47063 * 119.99788 * 2 1 3 5 5 C 1.38182 * 119.84728 * 254.98273 * 4 2 1 6 6 C 1.38304 * 120.14961 * 179.76548 * 5 4 2 7 7 F 1.35102 * 120.08987 * 180.28228 * 6 5 4 8 8 C 1.39808 * 119.83164 * 0.52966 * 6 5 4 9 9 C 1.47694 * 120.15704 * 179.75001 * 8 6 5 10 10 O 1.21560 * 120.00027 * 359.71874 * 9 8 6 11 11 N 1.34781 * 119.99813 * 179.72343 * 9 8 6 12 12 C 1.46507 * 119.99623 * 179.97438 * 11 9 8 13 13 C 1.53005 * 109.46644 * 184.98321 * 12 11 9 14 14 C 1.50701 * 112.84829 * 59.65903 * 13 12 11 15 15 C 1.38237 * 120.00226 * 77.12529 * 14 13 12 16 16 C 1.38227 * 120.00245 * 179.97438 * 15 14 13 17 17 C 1.38238 * 120.00213 * 0.02562 * 16 15 14 18 18 C 1.38239 * 119.99573 * 0.07111 * 17 16 15 19 19 C 1.38237 * 119.99756 * 257.10137 * 14 13 12 20 20 C 1.53779 * 113.69211 * 288.38927 * 13 12 11 21 21 C 1.53780 * 87.08096 * 270.87546 * 20 13 12 22 22 H 1.08999 * 113.61632 * 89.11429 * 21 20 13 23 23 F 1.39902 * 113.61336 * 220.01998 * 21 20 13 24 24 C 1.53780 * 87.08130 * 334.56696 * 21 20 13 25 25 C 1.39662 * 119.68597 * 359.46840 * 8 6 5 26 26 C 1.38068 * 119.85203 * 0.25999 * 25 8 6 27 27 F 1.35103 * 119.91615 * 180.02562 * 26 25 8 28 28 H 0.96697 * 114.00200 * 300.00113 * 1 2 3 29 29 H 1.08993 * 109.47364 * 239.99993 * 2 1 3 30 30 H 1.48499 * 110.00235 * 299.99730 * 3 2 1 31 31 H 1.48500 * 109.99973 * 61.32134 * 3 2 1 32 32 H 1.08007 * 119.92298 * 0.02562 * 5 4 2 33 33 H 0.96998 * 119.99923 * 359.97438 * 11 9 8 34 34 H 1.08999 * 109.46758 * 64.98864 * 12 11 9 35 35 H 1.08991 * 109.46943 * 304.98136 * 12 11 9 36 36 H 1.08005 * 119.99993 * 359.97438 * 15 14 13 37 37 H 1.07998 * 119.99947 * 179.72349 * 16 15 14 38 38 H 1.07998 * 120.00344 * 179.97438 * 17 16 15 39 39 H 1.08001 * 119.99878 * 180.02562 * 18 17 16 40 40 H 1.07999 * 120.00294 * 359.97438 * 19 14 13 41 41 H 1.09001 * 113.61332 * 25.42384 * 20 13 12 42 42 H 1.08993 * 113.61566 * 156.32549 * 20 13 12 43 43 H 1.08997 * 113.61610 * 270.88439 * 24 21 20 44 44 H 1.09002 * 113.61268 * 139.98187 * 24 21 20 45 45 H 1.07997 * 120.06992 * 180.22908 * 25 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.4534 0.0197 2.2812 6 6 2.9117 -0.6254 3.4154 7 9 3.4166 0.0900 4.4442 8 6 2.8560 -2.0203 3.4925 9 6 3.3485 -2.7170 4.6981 10 8 3.8084 -2.0778 5.6242 11 7 3.2881 -4.0614 4.7713 12 6 3.7772 -4.7526 5.9670 13 6 3.7102 -6.2649 5.7450 14 6 4.5378 -6.7213 4.5712 15 6 5.9112 -6.8226 4.6914 16 6 6.6703 -7.2417 3.6149 17 6 6.0561 -7.5590 2.4178 18 6 4.6828 -7.4558 2.2969 19 6 3.9235 -7.0391 3.3743 20 6 2.2787 -6.8267 5.7450 21 6 2.4320 -7.0030 7.2649 22 1 2.1289 -6.1273 7.8389 23 9 1.8758 -8.1914 7.7502 24 6 3.9484 -7.0862 7.0231 25 6 2.3269 -2.7514 2.4266 26 6 1.8679 -2.0936 1.3028 27 9 1.3554 -2.7995 0.2712 28 1 -0.3933 0.4417 0.7650 29 1 1.7924 -0.5138 -0.8899 30 1 1.5615 2.4679 -1.2085 31 1 1.5879 2.4585 1.2243 32 1 2.4997 1.0970 2.2182 33 1 2.9209 -4.5714 4.0324 34 1 3.1569 -4.4830 6.8217 35 1 4.8090 -4.4590 6.1597 36 1 6.3912 -6.5743 5.6265 37 1 7.7437 -7.3166 3.7075 38 1 6.6491 -7.8861 1.5766 39 1 4.2029 -7.7041 1.3618 40 1 2.8504 -6.9607 3.2805 41 1 1.5221 -6.0938 5.4645 42 1 2.1789 -7.7677 5.2041 43 1 4.3051 -8.0982 6.8317 44 1 4.5397 -6.5630 7.7745 45 1 2.2775 -3.8288 2.4811 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13458982_12360598.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:27:06 Heat of formation + Delta-G solvation = -116.944545 kcal Electronic energy + Delta-G solvation = -34827.636260 eV Core-core repulsion = 29749.106245 eV Total energy + Delta-G solvation = -5078.530015 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 378.123 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -50.12231 -50.01512 -48.58272 -41.89129 -40.98612 -39.86009 -38.90213 -37.82966 -35.56645 -33.47855 -32.13961 -32.00688 -31.44507 -29.18069 -27.57091 -27.20965 -25.21117 -24.50258 -23.67909 -23.34244 -22.67680 -21.84397 -20.46603 -19.54239 -18.88444 -18.69991 -18.36508 -17.97403 -17.60848 -17.38882 -17.04551 -16.78694 -16.70976 -16.55635 -16.31894 -16.19212 -16.06208 -15.95845 -15.70687 -15.60575 -15.55936 -15.26726 -15.01556 -14.52309 -14.50605 -14.40257 -14.20124 -13.81232 -13.78683 -13.69683 -13.53211 -13.23783 -13.00711 -12.68091 -12.54971 -12.47572 -12.34125 -11.98090 -11.97505 -11.49701 -11.43628 -11.18562 -10.88398 -10.68043 -10.29601 -9.96238 -9.85543 -9.78828 -5.14108 -0.86971 -0.38847 0.27365 0.35512 1.00253 1.36455 1.40054 1.74048 1.78461 2.22283 2.68513 2.72411 2.76765 2.94629 2.99227 3.05386 3.09224 3.24551 3.29440 3.36414 3.43735 3.49823 3.66144 3.71628 3.93014 3.95391 3.99857 4.05223 4.12752 4.23615 4.26794 4.34706 4.40489 4.43661 4.47357 4.50034 4.53569 4.55653 4.59091 4.64512 4.66242 4.77067 4.93892 4.98302 5.10156 5.12512 5.31570 5.43447 5.48496 5.51452 5.94015 6.16116 6.18416 6.94199 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.519 6.519 2 C -0.079 4.079 3 Si 0.696 3.304 4 C -0.097 4.097 5 C -0.139 4.139 6 C 0.160 3.840 7 F -0.104 7.104 8 C -0.140 4.140 9 C 0.561 3.439 10 O -0.512 6.512 11 N -0.719 5.719 12 C 0.147 3.853 13 C -0.057 4.057 14 C -0.069 4.069 15 C -0.109 4.109 16 C -0.114 4.114 17 C -0.119 4.119 18 C -0.115 4.115 19 C -0.121 4.121 20 C -0.153 4.153 21 C 0.065 3.935 22 H 0.112 0.888 23 F -0.203 7.203 24 C -0.140 4.140 25 C -0.094 4.094 26 C 0.112 3.888 27 F -0.120 7.120 28 H 0.378 0.622 29 H 0.127 0.873 30 H -0.248 1.248 31 H -0.254 1.254 32 H 0.159 0.841 33 H 0.401 0.599 34 H 0.079 0.921 35 H 0.084 0.916 36 H 0.123 0.877 37 H 0.124 0.876 38 H 0.123 0.877 39 H 0.124 0.876 40 H 0.121 0.879 41 H 0.084 0.916 42 H 0.104 0.896 43 H 0.104 0.896 44 H 0.089 0.911 45 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.804 -0.877 -2.372 3.106 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.326 6.326 2 C -0.189 4.189 3 Si 0.596 3.404 4 C -0.099 4.099 5 C -0.158 4.158 6 C 0.139 3.861 7 F -0.082 7.082 8 C -0.144 4.144 9 C 0.347 3.653 10 O -0.388 6.388 11 N -0.372 5.372 12 C 0.023 3.977 13 C -0.057 4.057 14 C -0.069 4.069 15 C -0.127 4.127 16 C -0.132 4.132 17 C -0.137 4.137 18 C -0.133 4.133 19 C -0.139 4.139 20 C -0.191 4.191 21 C 0.029 3.971 22 H 0.130 0.870 23 F -0.184 7.184 24 C -0.178 4.178 25 C -0.113 4.113 26 C 0.092 3.908 27 F -0.098 7.098 28 H 0.226 0.774 29 H 0.145 0.855 30 H -0.173 1.173 31 H -0.179 1.179 32 H 0.176 0.824 33 H 0.237 0.763 34 H 0.097 0.903 35 H 0.102 0.898 36 H 0.141 0.859 37 H 0.142 0.858 38 H 0.141 0.859 39 H 0.142 0.858 40 H 0.139 0.861 41 H 0.103 0.897 42 H 0.122 0.878 43 H 0.122 0.878 44 H 0.107 0.893 45 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges 2.001 0.073 -2.212 2.984 hybrid contribution -1.214 -0.714 0.114 1.413 sum 0.786 -0.641 -2.099 2.331 Atomic orbital electron populations 1.86690 1.16676 1.79938 1.49260 1.25110 0.84697 1.11764 0.97304 0.94733 0.91342 0.73420 0.80933 1.20425 0.99361 0.92600 0.97481 1.21073 1.00949 1.01827 0.91910 1.17477 0.95283 0.87913 0.85379 1.91658 1.83536 1.77092 1.55915 1.19854 1.05584 0.92540 0.96459 1.17782 0.79158 0.82159 0.86241 1.90898 1.44198 1.65725 1.37979 1.45737 1.64435 1.06133 1.20880 1.21189 1.01296 0.87867 0.87316 1.20782 0.95943 0.94122 0.94872 1.19381 0.93601 1.00034 0.93844 1.20982 0.93082 0.99507 0.99090 1.21205 1.00135 0.98743 0.93123 1.21242 0.94968 0.99658 0.97835 1.21182 0.94134 0.99241 0.98713 1.21015 0.99788 1.00470 0.92650 1.23785 0.95924 1.03153 0.96211 1.23089 0.93934 0.85210 0.94831 0.86992 1.92834 1.86843 1.49075 1.89637 1.23654 0.96138 1.01936 0.96063 1.21164 0.97749 1.00995 0.91418 1.17204 0.98845 0.88837 0.85869 1.91587 1.84176 1.78015 1.56065 0.77402 0.85488 1.17268 1.17857 0.82407 0.76324 0.90314 0.89806 0.85947 0.85828 0.85913 0.85809 0.86067 0.89706 0.87784 0.87757 0.89267 0.83308 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 0.03 12.88 -35.23 -0.45 -0.42 16 2 C -0.08 0.13 2.44 36.01 0.09 0.22 16 3 Si 0.70 -1.76 30.23 -169.99 -5.14 -6.90 16 4 C -0.10 0.13 5.27 -104.49 -0.55 -0.42 16 5 C -0.14 0.18 8.62 -39.58 -0.34 -0.16 16 6 C 0.16 0.13 7.28 -38.97 -0.28 -0.15 16 7 F -0.10 -0.34 15.55 2.25 0.04 -0.31 16 8 C -0.14 -0.03 5.88 -104.92 -0.62 -0.65 16 9 C 0.56 0.85 7.77 -12.40 -0.10 0.76 16 10 O -0.51 -2.73 15.33 5.31 0.08 -2.64 16 11 N -0.72 1.00 5.26 -61.30 -0.32 0.67 16 12 C 0.15 -0.26 4.93 -4.04 -0.02 -0.28 16 13 C -0.06 0.16 0.63 -154.85 -0.10 0.06 16 14 C -0.07 0.12 4.42 -104.62 -0.46 -0.35 16 15 C -0.11 0.11 9.39 -39.59 -0.37 -0.26 16 16 C -0.11 0.09 10.05 -39.59 -0.40 -0.31 16 17 C -0.12 0.11 10.05 -39.58 -0.40 -0.29 16 18 C -0.11 0.16 10.05 -39.58 -0.40 -0.24 16 19 C -0.12 0.23 8.44 -39.58 -0.33 -0.10 16 20 C -0.15 0.43 6.08 -25.92 -0.16 0.27 16 21 C 0.07 -0.11 5.32 -25.92 -0.14 -0.25 16 22 H 0.11 -0.34 7.60 -51.93 -0.39 -0.74 16 23 F -0.20 -0.35 17.41 2.25 0.04 -0.31 16 24 C -0.14 0.35 6.77 -25.92 -0.18 0.17 16 25 C -0.09 0.16 9.52 -39.11 -0.37 -0.22 16 26 C 0.11 -0.08 7.23 -39.49 -0.29 -0.37 16 27 F -0.12 -0.08 16.73 2.25 0.04 -0.04 16 28 H 0.38 -1.22 8.70 45.56 0.40 -0.83 16 29 H 0.13 -0.26 7.89 -51.93 -0.41 -0.67 16 30 H -0.25 -0.19 7.11 56.52 0.40 0.21 16 31 H -0.25 0.28 6.68 56.52 0.38 0.65 16 32 H 0.16 -0.43 4.83 -52.48 -0.25 -0.69 16 33 H 0.40 -1.31 5.73 -40.82 -0.23 -1.55 16 34 H 0.08 -0.15 7.30 -51.93 -0.38 -0.53 16 35 H 0.08 -0.06 8.14 -51.93 -0.42 -0.49 16 36 H 0.12 -0.25 8.03 -52.48 -0.42 -0.67 16 37 H 0.12 -0.25 8.06 -52.49 -0.42 -0.67 16 38 H 0.12 -0.27 8.06 -52.49 -0.42 -0.69 16 39 H 0.12 -0.34 8.06 -52.49 -0.42 -0.76 16 40 H 0.12 -0.44 7.02 -52.49 -0.37 -0.81 16 41 H 0.08 -0.31 8.10 -51.93 -0.42 -0.73 16 42 H 0.10 -0.25 7.44 -51.93 -0.39 -0.63 16 43 H 0.10 -0.18 8.09 -51.93 -0.42 -0.60 16 44 H 0.09 -0.30 8.10 -51.93 -0.42 -0.72 16 45 H 0.15 -0.61 6.40 -52.49 -0.34 -0.94 16 LS Contribution 384.85 15.07 5.80 5.80 Total: 0.00 -8.28 384.85 -10.29 -18.57 By element: Atomic # 1 Polarization: -6.89 SS G_CDS: -4.96 Total: -11.85 kcal Atomic # 6 Polarization: 2.84 SS G_CDS: -5.41 Total: -2.57 kcal Atomic # 7 Polarization: 1.00 SS G_CDS: -0.32 Total: 0.67 kcal Atomic # 8 Polarization: -2.69 SS G_CDS: -0.37 Total: -3.07 kcal Atomic # 9 Polarization: -0.77 SS G_CDS: 0.11 Total: -0.66 kcal Atomic # 14 Polarization: -1.76 SS G_CDS: -5.14 Total: -6.90 kcal Total LS contribution 5.80 Total: 5.80 kcal Total: -8.28 -10.29 -18.57 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13458982_12360598.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -98.374 kcal (2) G-P(sol) polarization free energy of solvation -8.279 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -106.653 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.292 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.571 kcal (6) G-S(sol) free energy of system = (1) + (5) -116.945 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds