Wall clock time and date at job start Sat Mar 6 2021 21:27:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86301 * 109.46960 * 2 1 4 4 C 1.50702 * 109.47063 * 119.99788 * 2 1 3 5 5 C 1.38182 * 119.84728 * 254.98273 * 4 2 1 6 6 C 1.38304 * 120.14961 * 179.76548 * 5 4 2 7 7 F 1.35102 * 120.08987 * 180.28228 * 6 5 4 8 8 C 1.39808 * 119.83164 * 0.52966 * 6 5 4 9 9 C 1.47694 * 120.15704 * 179.75001 * 8 6 5 10 10 O 1.21560 * 120.00027 * 359.71874 * 9 8 6 11 11 N 1.34781 * 119.99813 * 179.72343 * 9 8 6 12 12 C 1.46507 * 119.99623 * 179.97438 * 11 9 8 13 13 C 1.53005 * 109.46644 * 184.98321 * 12 11 9 14 14 C 1.50701 * 112.84829 * 59.65903 * 13 12 11 15 15 C 1.38237 * 120.00226 * 77.12529 * 14 13 12 16 16 C 1.38227 * 120.00245 * 179.97438 * 15 14 13 17 17 C 1.38238 * 120.00213 * 0.02562 * 16 15 14 18 18 C 1.38239 * 119.99573 * 0.07111 * 17 16 15 19 19 C 1.38237 * 119.99756 * 257.10137 * 14 13 12 20 20 C 1.53779 * 113.69211 * 288.38927 * 13 12 11 21 21 C 1.53780 * 87.08096 * 270.87546 * 20 13 12 22 22 H 1.08999 * 113.61632 * 89.11429 * 21 20 13 23 23 F 1.39902 * 113.61336 * 220.01998 * 21 20 13 24 24 C 1.53780 * 87.08130 * 334.56696 * 21 20 13 25 25 C 1.39662 * 119.68597 * 359.46840 * 8 6 5 26 26 C 1.38068 * 119.85203 * 0.25999 * 25 8 6 27 27 F 1.35103 * 119.91615 * 180.02562 * 26 25 8 28 28 H 0.96697 * 114.00200 * 300.00113 * 1 2 3 29 29 H 1.08993 * 109.47364 * 239.99993 * 2 1 3 30 30 H 1.48499 * 110.00235 * 299.99730 * 3 2 1 31 31 H 1.48500 * 109.99973 * 61.32134 * 3 2 1 32 32 H 1.08007 * 119.92298 * 0.02562 * 5 4 2 33 33 H 0.96998 * 119.99923 * 359.97438 * 11 9 8 34 34 H 1.08999 * 109.46758 * 64.98864 * 12 11 9 35 35 H 1.08991 * 109.46943 * 304.98136 * 12 11 9 36 36 H 1.08005 * 119.99993 * 359.97438 * 15 14 13 37 37 H 1.07998 * 119.99947 * 179.72349 * 16 15 14 38 38 H 1.07998 * 120.00344 * 179.97438 * 17 16 15 39 39 H 1.08001 * 119.99878 * 180.02562 * 18 17 16 40 40 H 1.07999 * 120.00294 * 359.97438 * 19 14 13 41 41 H 1.09001 * 113.61332 * 25.42384 * 20 13 12 42 42 H 1.08993 * 113.61566 * 156.32549 * 20 13 12 43 43 H 1.08997 * 113.61610 * 270.88439 * 24 21 20 44 44 H 1.09002 * 113.61268 * 139.98187 * 24 21 20 45 45 H 1.07997 * 120.06992 * 180.22908 * 25 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.4534 0.0197 2.2812 6 6 2.9117 -0.6254 3.4154 7 9 3.4166 0.0900 4.4442 8 6 2.8560 -2.0203 3.4925 9 6 3.3485 -2.7170 4.6981 10 8 3.8084 -2.0778 5.6242 11 7 3.2881 -4.0614 4.7713 12 6 3.7772 -4.7526 5.9670 13 6 3.7102 -6.2649 5.7450 14 6 4.5378 -6.7213 4.5712 15 6 5.9112 -6.8226 4.6914 16 6 6.6703 -7.2417 3.6149 17 6 6.0561 -7.5590 2.4178 18 6 4.6828 -7.4558 2.2969 19 6 3.9235 -7.0391 3.3743 20 6 2.2787 -6.8267 5.7450 21 6 2.4320 -7.0030 7.2649 22 1 2.1289 -6.1273 7.8389 23 9 1.8758 -8.1914 7.7502 24 6 3.9484 -7.0862 7.0231 25 6 2.3269 -2.7514 2.4266 26 6 1.8679 -2.0936 1.3028 27 9 1.3554 -2.7995 0.2712 28 1 -0.3933 0.4417 0.7650 29 1 1.7924 -0.5138 -0.8899 30 1 1.5615 2.4679 -1.2085 31 1 1.5879 2.4585 1.2243 32 1 2.4997 1.0970 2.2182 33 1 2.9209 -4.5714 4.0324 34 1 3.1569 -4.4830 6.8217 35 1 4.8090 -4.4590 6.1597 36 1 6.3912 -6.5743 5.6265 37 1 7.7437 -7.3166 3.7075 38 1 6.6491 -7.8861 1.5766 39 1 4.2029 -7.7041 1.3618 40 1 2.8504 -6.9607 3.2805 41 1 1.5221 -6.0938 5.4645 42 1 2.1789 -7.7677 5.2041 43 1 4.3051 -8.0982 6.8317 44 1 4.5397 -6.5630 7.7745 45 1 2.2775 -3.8288 2.4811 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13458982_12360598.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:27:05 Heat of formation + Delta-G solvation = -112.372202 kcal Electronic energy + Delta-G solvation = -34827.437989 eV Core-core repulsion = 29749.106245 eV Total energy + Delta-G solvation = -5078.331744 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 378.123 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -50.11650 -50.10391 -48.58011 -41.81771 -40.92968 -39.85244 -38.76518 -37.77818 -35.60006 -33.41710 -31.99368 -31.85244 -31.39594 -29.11221 -27.45664 -27.04313 -25.08343 -24.42480 -23.63502 -23.19891 -22.53497 -21.86014 -20.37704 -19.46220 -18.82970 -18.68254 -18.25971 -17.95048 -17.47101 -17.37992 -17.07231 -16.71344 -16.65942 -16.52013 -16.26061 -16.16951 -16.03526 -15.91308 -15.65858 -15.50477 -15.46864 -15.19673 -14.94437 -14.49509 -14.46632 -14.25745 -14.14843 -13.83009 -13.68873 -13.55287 -13.38325 -13.19083 -12.98984 -12.54092 -12.42686 -12.38965 -12.20039 -11.93090 -11.82625 -11.37073 -11.31255 -11.22648 -10.79034 -10.63232 -10.27150 -9.84069 -9.82096 -9.65335 -4.95967 -0.83079 -0.32537 0.40818 0.49163 1.15589 1.36855 1.53906 1.77593 1.91260 2.22172 2.77059 2.81526 2.82998 3.08135 3.12495 3.21909 3.23200 3.40795 3.43143 3.50055 3.57482 3.61258 3.76911 3.87273 4.11481 4.12418 4.14146 4.21454 4.30359 4.30840 4.37417 4.46831 4.52091 4.60677 4.64478 4.67903 4.68354 4.68813 4.71303 4.72329 4.84770 4.93651 5.09568 5.14332 5.17504 5.27096 5.36681 5.57993 5.62867 5.65024 6.09614 6.23410 6.38880 6.92614 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.539 6.539 2 C -0.087 4.087 3 Si 0.771 3.229 4 C -0.090 4.090 5 C -0.130 4.130 6 C 0.141 3.859 7 F -0.123 7.123 8 C -0.147 4.147 9 C 0.559 3.441 10 O -0.557 6.557 11 N -0.703 5.703 12 C 0.146 3.854 13 C -0.042 4.042 14 C -0.073 4.073 15 C -0.122 4.122 16 C -0.129 4.129 17 C -0.133 4.133 18 C -0.124 4.124 19 C -0.124 4.124 20 C -0.147 4.147 21 C 0.055 3.945 22 H 0.126 0.874 23 F -0.224 7.224 24 C -0.138 4.138 25 C -0.079 4.079 26 C 0.106 3.894 27 F -0.127 7.127 28 H 0.390 0.610 29 H 0.132 0.868 30 H -0.294 1.294 31 H -0.269 1.269 32 H 0.172 0.828 33 H 0.412 0.588 34 H 0.083 0.917 35 H 0.073 0.927 36 H 0.126 0.874 37 H 0.129 0.871 38 H 0.131 0.869 39 H 0.137 0.863 40 H 0.141 0.859 41 H 0.098 0.902 42 H 0.103 0.897 43 H 0.097 0.903 44 H 0.097 0.903 45 H 0.175 0.825 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.259 -1.279 -3.059 3.547 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.348 6.348 2 C -0.195 4.195 3 Si 0.675 3.325 4 C -0.092 4.092 5 C -0.148 4.148 6 C 0.121 3.879 7 F -0.101 7.101 8 C -0.151 4.151 9 C 0.346 3.654 10 O -0.437 6.437 11 N -0.356 5.356 12 C 0.023 3.977 13 C -0.043 4.043 14 C -0.073 4.073 15 C -0.140 4.140 16 C -0.147 4.147 17 C -0.151 4.151 18 C -0.141 4.141 19 C -0.142 4.142 20 C -0.184 4.184 21 C 0.019 3.981 22 H 0.143 0.857 23 F -0.205 7.205 24 C -0.176 4.176 25 C -0.098 4.098 26 C 0.086 3.914 27 F -0.105 7.105 28 H 0.240 0.760 29 H 0.150 0.850 30 H -0.222 1.222 31 H -0.196 1.196 32 H 0.189 0.811 33 H 0.250 0.750 34 H 0.101 0.899 35 H 0.092 0.908 36 H 0.144 0.856 37 H 0.147 0.853 38 H 0.149 0.851 39 H 0.155 0.845 40 H 0.159 0.841 41 H 0.117 0.883 42 H 0.121 0.879 43 H 0.115 0.885 44 H 0.116 0.884 45 H 0.192 0.808 Dipole moment (debyes) X Y Z Total from point charges 1.451 -0.381 -2.904 3.269 hybrid contribution -1.064 -0.606 0.277 1.255 sum 0.388 -0.987 -2.627 2.833 Atomic orbital electron populations 1.86656 1.17440 1.80406 1.50270 1.25301 0.84205 1.12612 0.97372 0.93835 0.90124 0.71132 0.77436 1.20445 0.98807 0.92527 0.97373 1.21111 1.00201 1.02414 0.91058 1.17770 0.96233 0.88340 0.85603 1.91607 1.84066 1.77551 1.56926 1.19810 1.06329 0.92420 0.96585 1.17991 0.78601 0.82749 0.86061 1.90876 1.46472 1.66738 1.39582 1.45645 1.63321 1.05359 1.21252 1.21209 1.00834 0.88319 0.87322 1.20588 0.96032 0.93233 0.94449 1.19489 0.93462 1.00012 0.94302 1.21153 0.93652 0.99811 0.99341 1.21392 1.00690 0.99181 0.93455 1.21459 0.95586 0.99901 0.98105 1.21432 0.94084 0.99103 0.99522 1.21261 1.00802 0.99847 0.92255 1.23763 0.95941 1.03412 0.95285 1.23383 0.94251 0.84716 0.95768 0.85663 1.92789 1.87227 1.50489 1.90001 1.23633 0.95905 1.01686 0.96420 1.21296 0.96211 1.02083 0.90212 1.17327 0.99081 0.89055 0.85937 1.91575 1.84349 1.78183 1.56404 0.76013 0.84980 1.22151 1.19565 0.81104 0.75043 0.89873 0.90828 0.85559 0.85277 0.85135 0.84473 0.84135 0.88346 0.87882 0.88461 0.88434 0.80804 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.35 12.88 -148.98 -1.92 -1.57 16 2 C -0.09 0.33 2.44 71.24 0.17 0.51 16 3 Si 0.77 -4.14 30.23 68.60 2.07 -2.06 16 4 C -0.09 0.31 5.27 -19.78 -0.10 0.20 16 5 C -0.13 0.38 8.62 22.27 0.19 0.58 16 6 C 0.14 0.28 7.28 22.67 0.17 0.44 16 7 F -0.12 -0.96 15.55 44.97 0.70 -0.26 16 8 C -0.15 -0.04 5.88 -20.06 -0.12 -0.15 16 9 C 0.56 1.83 7.77 86.74 0.67 2.51 16 10 O -0.56 -6.62 15.33 -3.90 -0.06 -6.68 16 11 N -0.70 2.35 5.26 -466.11 -2.45 -0.10 16 12 C 0.15 -0.55 4.93 86.38 0.43 -0.12 16 13 C -0.04 0.26 0.63 -52.40 -0.03 0.22 16 14 C -0.07 0.28 4.42 -19.86 -0.09 0.19 16 15 C -0.12 0.21 9.39 22.27 0.21 0.42 16 16 C -0.13 0.15 10.05 22.27 0.22 0.37 16 17 C -0.13 0.25 10.05 22.27 0.22 0.47 16 18 C -0.12 0.43 10.05 22.27 0.22 0.66 16 19 C -0.12 0.61 8.44 22.27 0.19 0.80 16 20 C -0.15 0.98 6.08 31.12 0.19 1.17 16 21 C 0.05 -0.21 5.32 31.12 0.17 -0.04 16 22 H 0.13 -0.85 7.60 -2.39 -0.02 -0.86 16 23 F -0.22 -0.81 17.41 44.97 0.78 -0.03 16 24 C -0.14 0.70 6.77 31.12 0.21 0.91 16 25 C -0.08 0.36 9.52 22.57 0.21 0.57 16 26 C 0.11 -0.27 7.23 22.33 0.16 -0.11 16 27 F -0.13 -0.01 16.73 44.97 0.75 0.74 16 28 H 0.39 -2.72 8.70 -74.06 -0.64 -3.36 16 29 H 0.13 -0.65 7.89 -2.39 -0.02 -0.66 16 30 H -0.29 -0.71 7.11 99.48 0.71 0.00 16 31 H -0.27 0.74 6.68 99.48 0.66 1.40 16 32 H 0.17 -1.04 4.83 -2.91 -0.01 -1.05 16 33 H 0.41 -3.31 5.73 -92.71 -0.53 -3.84 16 34 H 0.08 -0.34 7.30 -2.39 -0.02 -0.36 16 35 H 0.07 -0.07 8.14 -2.39 -0.02 -0.09 16 36 H 0.13 -0.43 8.03 -2.91 -0.02 -0.45 16 37 H 0.13 -0.43 8.06 -2.91 -0.02 -0.45 16 38 H 0.13 -0.57 8.06 -2.91 -0.02 -0.59 16 39 H 0.14 -0.93 8.06 -2.91 -0.02 -0.95 16 40 H 0.14 -1.32 7.02 -2.91 -0.02 -1.34 16 41 H 0.10 -0.91 8.10 -2.39 -0.02 -0.93 16 42 H 0.10 -0.61 7.44 -2.39 -0.02 -0.63 16 43 H 0.10 -0.31 8.09 -2.39 -0.02 -0.33 16 44 H 0.10 -0.66 8.10 -2.39 -0.02 -0.68 16 45 H 0.17 -1.81 6.40 -2.91 -0.02 -1.82 16 Total: 0.00 -20.44 384.85 3.08 -17.37 By element: Atomic # 1 Polarization: -16.91 SS G_CDS: -0.10 Total: -17.01 kcal Atomic # 6 Polarization: 6.30 SS G_CDS: 3.30 Total: 9.60 kcal Atomic # 7 Polarization: 2.35 SS G_CDS: -2.45 Total: -0.10 kcal Atomic # 8 Polarization: -6.27 SS G_CDS: -1.98 Total: -8.25 kcal Atomic # 9 Polarization: -1.79 SS G_CDS: 2.23 Total: 0.45 kcal Atomic # 14 Polarization: -4.14 SS G_CDS: 2.07 Total: -2.06 kcal Total: -20.44 3.08 -17.37 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13458982_12360598.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -95.006 kcal (2) G-P(sol) polarization free energy of solvation -20.442 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -115.448 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.076 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.366 kcal (6) G-S(sol) free energy of system = (1) + (5) -112.372 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds