Wall clock time and date at job start Sat Mar 6 2021 21:27:08 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35654 * 116.99968 * 2 1 4 4 C 1.40141 * 120.14832 * 179.97438 * 3 2 1 5 5 C 1.47529 * 120.18999 * 0.02562 * 4 3 2 6 6 O 1.21585 * 120.00437 * 359.97438 * 5 4 3 7 7 N 1.34783 * 119.99730 * 179.97438 * 5 4 3 8 8 C 1.46503 * 119.99684 * 179.97438 * 7 5 4 9 9 C 1.53000 * 109.46669 * 185.40234 * 8 7 5 10 10 C 1.50697 * 112.84805 * 54.18748 * 9 8 7 11 11 C 1.38238 * 119.99939 * 76.64938 * 10 9 8 12 12 C 1.38240 * 119.99821 * 179.76442 * 11 10 9 13 13 C 1.38236 * 119.99765 * 0.48452 * 12 11 10 14 14 C 1.38227 * 120.00309 * 359.78763 * 13 12 11 15 15 C 1.38232 * 120.00195 * 256.91794 * 10 9 8 16 16 C 1.53780 * 113.69470 * 282.91711 * 9 8 7 17 17 C 1.54056 * 87.07706 * 270.87214 * 16 9 8 18 18 H 1.08996 * 113.61337 * 89.06950 * 17 16 9 19 19 F 1.39904 * 113.69547 * 220.05655 * 17 16 9 20 20 C 1.53784 * 113.61095 * 185.37847 * 9 8 7 21 21 C 1.39703 * 119.61461 * 180.27550 * 4 3 2 22 22 C 1.37791 * 119.90806 * 359.47581 * 21 4 3 23 23 C 1.50701 * 119.84871 * 180.24696 * 22 21 4 24 24 O 1.42899 * 109.47571 * 300.28251 * 23 22 21 25 25 Si 1.86305 * 109.46998 * 180.27790 * 23 22 21 26 26 C 1.38542 * 120.30145 * 0.53431 * 22 21 4 27 27 C 1.38061 * 120.38750 * 359.73883 * 26 22 21 28 28 H 1.08998 * 109.47362 * 179.97438 * 1 2 3 29 29 H 1.09000 * 109.47259 * 299.99971 * 1 2 3 30 30 H 1.09006 * 109.46744 * 59.99658 * 1 2 3 31 31 H 0.96995 * 120.00047 * 0.02562 * 7 5 4 32 32 H 1.09006 * 109.46664 * 65.41196 * 8 7 5 33 33 H 1.08990 * 109.47580 * 305.40707 * 8 7 5 34 34 H 1.07991 * 120.00221 * 359.97438 * 11 10 9 35 35 H 1.07995 * 120.00075 * 180.24261 * 12 11 10 36 36 H 1.08000 * 120.00108 * 179.76754 * 13 12 11 37 37 H 1.07998 * 120.00446 * 179.97438 * 14 13 12 38 38 H 1.08008 * 119.99699 * 0.02562 * 15 10 9 39 39 H 1.08998 * 113.61549 * 25.41927 * 16 9 8 40 40 H 1.08994 * 113.61537 * 156.32966 * 16 9 8 41 41 H 1.09004 * 113.61564 * 203.74903 * 20 9 8 42 42 H 1.08999 * 113.61756 * 334.56970 * 20 9 8 43 43 H 1.08003 * 120.04664 * 179.72628 * 21 4 3 44 44 H 1.09004 * 109.46589 * 60.28526 * 23 22 21 45 45 H 0.96700 * 113.99518 * 179.97438 * 24 23 22 46 46 H 1.48494 * 110.00130 * 298.68844 * 25 23 22 47 47 H 1.48499 * 109.99593 * 60.00780 * 25 23 22 48 48 H 1.08005 * 119.80948 * 179.72076 * 26 22 21 49 49 H 1.08001 * 119.95042 * 180.02562 * 27 26 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0449 1.2087 0.0000 4 6 3.4442 1.2857 0.0005 5 6 4.2550 0.0532 0.0005 6 8 3.7095 -1.0335 0.0005 7 7 5.6005 0.1317 0.0005 8 6 6.4057 -1.0922 0.0011 9 6 7.8857 -0.7289 0.1368 10 6 8.1673 0.1406 1.3350 11 6 8.2020 -0.4160 2.6000 12 6 8.4652 0.3808 3.6986 13 6 8.6836 1.7357 3.5333 14 6 8.6433 2.2932 2.2691 15 6 8.3853 1.4955 1.1699 16 6 8.5156 -0.2064 -1.1651 17 6 8.8513 -1.6725 -1.4983 18 1 8.0605 -2.1886 -2.0427 19 9 10.1127 -1.8425 -2.0791 20 6 8.8300 -1.9367 0.0165 21 6 4.0668 2.5363 0.0064 22 6 3.3038 3.6836 0.0006 23 6 3.9768 5.0320 0.0013 24 8 4.7919 5.1570 1.1683 25 14 2.6826 6.3721 0.0012 26 6 1.9207 3.6033 0.0002 27 6 1.2925 2.3739 0.0002 28 1 -0.3634 -1.0276 -0.0005 29 1 -0.3634 0.5138 0.8900 30 1 -0.3633 0.5139 -0.8900 31 1 6.0357 0.9986 0.0009 32 1 6.2481 -1.6312 -0.9332 33 1 6.1080 -1.7226 0.8389 34 1 8.0270 -1.4737 2.7295 35 1 8.4962 -0.0547 4.6864 36 1 8.8855 2.3588 4.3920 37 1 8.8136 3.3518 2.1400 38 1 8.3535 1.9312 0.1821 39 1 7.7955 0.2430 -1.8489 40 1 9.3950 0.4173 -1.0050 41 1 9.7954 -1.7860 0.4996 42 1 8.3641 -2.8840 0.2881 43 1 5.1447 2.6037 0.0113 44 1 4.5991 5.1278 -0.8885 45 1 5.2569 6.0024 1.2346 46 1 1.8484 6.2725 -1.2233 47 1 1.8276 6.2524 1.2094 48 1 1.3304 4.5078 0.0003 49 1 0.2139 2.3196 -0.0006 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13458982_12496546.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:27:08 Heat of formation + Delta-G solvation = -61.035486 kcal Electronic energy + Delta-G solvation = -34651.022876 eV Core-core repulsion = 30039.605400 eV Total energy + Delta-G solvation = -4611.417476 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 372.157 amu Computer time = 1.15 seconds Orbital eigenvalues (eV) -48.57717 -42.00347 -41.36862 -39.94893 -39.18645 -38.71970 -37.17548 -35.44296 -32.96330 -32.06679 -31.91838 -31.83770 -28.95541 -28.33678 -27.10869 -26.14775 -25.49504 -24.62960 -23.21328 -22.63209 -22.43461 -21.49067 -20.15939 -19.41016 -18.47144 -18.40062 -18.09640 -17.74535 -17.43106 -16.97617 -16.77674 -16.57233 -16.26931 -16.22595 -16.02654 -15.94015 -15.56182 -15.48134 -15.42101 -14.96467 -14.78519 -14.49882 -14.40003 -14.24039 -14.15020 -13.91191 -13.72415 -13.57364 -13.54612 -13.30395 -13.01383 -12.56854 -12.48718 -12.40163 -12.35335 -12.19532 -12.19022 -11.92592 -11.80727 -11.34136 -11.25156 -11.05535 -10.43775 -10.28342 -10.13260 -9.80495 -9.63617 -9.39071 -4.92267 -0.43802 0.07661 0.42638 0.51039 1.32451 1.62815 1.68388 1.94991 1.99264 2.13834 2.54301 2.84274 3.13088 3.21213 3.30990 3.39655 3.45240 3.50030 3.55931 3.62563 3.75343 3.87203 3.91611 4.04881 4.12501 4.13820 4.18119 4.21800 4.24173 4.25977 4.31406 4.45585 4.48388 4.55278 4.59411 4.62642 4.65155 4.69301 4.69623 4.72229 4.78873 4.85237 4.91340 4.93277 5.11020 5.12967 5.16097 5.27236 5.28736 5.39985 5.59380 5.64578 5.66184 6.11405 6.15959 6.40149 6.96474 7.10711 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.011 3.989 2 O -0.308 6.308 3 C 0.172 3.828 4 C -0.192 4.192 5 C 0.560 3.440 6 O -0.560 6.560 7 N -0.710 5.710 8 C 0.149 3.851 9 C -0.043 4.043 10 C -0.072 4.072 11 C -0.125 4.125 12 C -0.131 4.131 13 C -0.133 4.133 14 C -0.117 4.117 15 C -0.123 4.123 16 C -0.144 4.144 17 C 0.056 3.944 18 H 0.124 0.876 19 F -0.223 7.223 20 C -0.138 4.138 21 C -0.011 4.011 22 C -0.132 4.132 23 C -0.068 4.068 24 O -0.561 6.561 25 Si 0.764 3.236 26 C -0.065 4.065 27 C -0.213 4.213 28 H 0.113 0.887 29 H 0.069 0.931 30 H 0.072 0.928 31 H 0.409 0.591 32 H 0.079 0.921 33 H 0.066 0.934 34 H 0.122 0.878 35 H 0.127 0.873 36 H 0.132 0.868 37 H 0.142 0.858 38 H 0.141 0.859 39 H 0.096 0.904 40 H 0.105 0.895 41 H 0.098 0.902 42 H 0.094 0.906 43 H 0.156 0.844 44 H 0.103 0.897 45 H 0.404 0.596 46 H -0.287 1.287 47 H -0.298 1.298 48 H 0.131 0.869 49 H 0.159 0.841 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.127 7.907 -0.686 8.017 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.084 4.084 2 O -0.219 6.219 3 C 0.124 3.876 4 C -0.196 4.196 5 C 0.348 3.652 6 O -0.439 6.439 7 N -0.363 5.363 8 C 0.025 3.975 9 C -0.044 4.044 10 C -0.072 4.072 11 C -0.143 4.143 12 C -0.149 4.149 13 C -0.150 4.150 14 C -0.135 4.135 15 C -0.141 4.141 16 C -0.181 4.181 17 C 0.020 3.980 18 H 0.142 0.858 19 F -0.203 7.203 20 C -0.177 4.177 21 C -0.030 4.030 22 C -0.133 4.133 23 C -0.178 4.178 24 O -0.371 6.371 25 Si 0.671 3.329 26 C -0.083 4.083 27 C -0.231 4.231 28 H 0.132 0.868 29 H 0.087 0.913 30 H 0.090 0.910 31 H 0.247 0.753 32 H 0.097 0.903 33 H 0.084 0.916 34 H 0.140 0.860 35 H 0.145 0.855 36 H 0.150 0.850 37 H 0.160 0.840 38 H 0.159 0.841 39 H 0.115 0.885 40 H 0.123 0.877 41 H 0.117 0.883 42 H 0.113 0.887 43 H 0.174 0.826 44 H 0.121 0.879 45 H 0.256 0.744 46 H -0.214 1.214 47 H -0.226 1.226 48 H 0.148 0.852 49 H 0.176 0.824 Dipole moment (debyes) X Y Z Total from point charges -0.200 6.492 -0.605 6.523 hybrid contribution -0.146 -0.366 0.184 0.435 sum -0.346 6.126 -0.421 6.150 Atomic orbital electron populations 1.23464 0.76529 1.05733 1.02626 1.86337 1.23172 1.25894 1.86539 1.19309 0.91407 0.85320 0.91610 1.19491 0.91082 0.94338 1.14714 1.18108 0.82516 0.88381 0.76197 1.90813 1.72445 1.29982 1.50657 1.45665 1.04901 1.10618 1.75131 1.21130 0.87188 0.86494 1.02664 1.20590 0.93192 0.96849 0.93761 1.19473 1.00379 0.94085 0.93292 1.21123 1.00344 1.00346 0.92457 1.21378 0.99741 0.94551 0.99213 1.21455 0.99914 0.95285 0.98393 1.21431 0.98813 1.00943 0.92333 1.21263 1.00213 0.92706 0.99923 1.23793 1.02377 0.96221 0.95723 1.23398 0.81813 0.99018 0.93768 0.85809 1.92787 1.44410 1.96567 1.86574 1.23636 1.00472 0.98572 0.94977 1.21116 1.00834 0.88930 0.92120 1.19532 0.92849 0.95502 1.05378 1.24644 1.02529 0.98580 0.92076 1.86450 1.64689 1.43899 1.42032 0.94350 0.77555 0.84693 0.76291 1.21086 0.94426 0.97342 0.95466 1.21373 1.01661 0.90964 1.09137 0.86841 0.91256 0.90958 0.75339 0.90308 0.91557 0.85973 0.85458 0.85029 0.84018 0.84118 0.88537 0.87663 0.88331 0.88721 0.82648 0.87924 0.74440 1.21377 1.22626 0.85189 0.82371 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 0.01 9.81 113.37 1.11 1.12 16 2 O -0.31 -3.36 8.57 -68.78 -0.59 -3.95 16 3 C 0.17 1.54 6.70 22.84 0.15 1.69 16 4 C -0.19 -1.55 5.89 -20.01 -0.12 -1.67 16 5 C 0.56 5.64 7.76 86.69 0.67 6.31 16 6 O -0.56 -10.07 15.15 16.94 0.26 -9.82 16 7 N -0.71 -1.74 5.23 -466.27 -2.44 -4.18 16 8 C 0.15 0.12 4.97 86.38 0.43 0.55 16 9 C -0.04 0.12 0.70 -52.40 -0.04 0.08 16 10 C -0.07 0.06 4.25 -19.87 -0.08 -0.02 16 11 C -0.12 -0.17 9.39 22.27 0.21 0.04 16 12 C -0.13 -0.19 10.05 22.27 0.22 0.03 16 13 C -0.13 -0.02 10.05 22.27 0.22 0.21 16 14 C -0.12 0.22 10.05 22.27 0.22 0.44 16 15 C -0.12 0.32 8.25 22.27 0.18 0.51 16 16 C -0.14 0.61 6.11 31.21 0.19 0.80 16 17 C 0.06 -0.09 5.33 31.22 0.17 0.08 16 18 H 0.12 -0.53 7.62 -2.39 -0.02 -0.55 16 19 F -0.22 -1.12 17.41 44.97 0.78 -0.33 16 20 C -0.14 0.34 6.77 31.12 0.21 0.55 16 21 C -0.01 -0.03 9.08 22.52 0.20 0.17 16 22 C -0.13 -0.28 5.42 -19.90 -0.11 -0.39 16 23 C -0.07 0.30 2.81 71.24 0.20 0.50 16 24 O -0.56 2.64 12.73 -148.98 -1.90 0.74 16 25 Si 0.76 -3.65 29.77 68.60 2.04 -1.61 16 26 C -0.07 -0.23 8.66 22.30 0.19 -0.04 16 27 C -0.21 -0.92 9.03 22.34 0.20 -0.72 16 28 H 0.11 -0.12 8.14 -2.39 -0.02 -0.13 16 29 H 0.07 -0.11 7.66 -2.39 -0.02 -0.13 16 30 H 0.07 -0.16 7.66 -2.38 -0.02 -0.18 16 31 H 0.41 -0.77 5.41 -92.71 -0.50 -1.27 16 32 H 0.08 0.03 7.32 -2.38 -0.02 0.01 16 33 H 0.07 0.27 8.13 -2.39 -0.02 0.25 16 34 H 0.12 0.02 8.04 -2.92 -0.02 -0.01 16 35 H 0.13 -0.09 8.06 -2.91 -0.02 -0.11 16 36 H 0.13 -0.36 8.06 -2.91 -0.02 -0.38 16 37 H 0.14 -0.85 8.06 -2.91 -0.02 -0.88 16 38 H 0.14 -0.99 7.02 -2.91 -0.02 -1.01 16 39 H 0.10 -0.60 8.10 -2.39 -0.02 -0.62 16 40 H 0.10 -0.44 7.43 -2.39 -0.02 -0.46 16 41 H 0.10 -0.11 8.09 -2.39 -0.02 -0.13 16 42 H 0.09 -0.37 8.10 -2.39 -0.02 -0.39 16 43 H 0.16 -0.41 6.40 -2.91 -0.02 -0.42 16 44 H 0.10 -0.97 7.96 -2.39 -0.02 -0.99 16 45 H 0.40 -6.03 8.74 -74.06 -0.65 -6.67 16 46 H -0.29 -0.14 7.11 99.48 0.71 0.57 16 47 H -0.30 -0.96 7.11 99.48 0.71 -0.26 16 48 H 0.13 0.20 4.85 -2.91 -0.01 0.19 16 49 H 0.16 -0.11 6.30 -2.91 -0.02 -0.13 16 Total: 0.00 -25.10 401.32 2.50 -22.60 By element: Atomic # 1 Polarization: -13.60 SS G_CDS: -0.11 Total: -13.71 kcal Atomic # 6 Polarization: 5.81 SS G_CDS: 4.45 Total: 10.26 kcal Atomic # 7 Polarization: -1.74 SS G_CDS: -2.44 Total: -4.18 kcal Atomic # 8 Polarization: -10.79 SS G_CDS: -2.23 Total: -13.02 kcal Atomic # 9 Polarization: -1.12 SS G_CDS: 0.78 Total: -0.33 kcal Atomic # 14 Polarization: -3.65 SS G_CDS: 2.04 Total: -1.61 kcal Total: -25.10 2.50 -22.60 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13458982_12496546.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -38.440 kcal (2) G-P(sol) polarization free energy of solvation -25.097 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -63.537 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.501 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.596 kcal (6) G-S(sol) free energy of system = (1) + (5) -61.035 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.15 seconds