Wall clock time and date at job start Sat Mar 6 2021 21:27:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86295 * 109.47469 * 2 1 4 4 C 1.50698 * 109.47290 * 120.00545 * 2 1 3 5 5 C 1.38633 * 119.94057 * 194.99910 * 4 2 1 6 6 F 1.35098 * 119.88170 * 0.02562 * 5 4 2 7 7 C 1.38683 * 120.23928 * 179.97438 * 5 4 2 8 8 C 1.37814 * 120.11413 * 359.97438 * 7 5 4 9 9 C 1.39671 * 119.88404 * 0.02562 * 8 7 5 10 10 C 1.47728 * 120.11641 * 180.02562 * 9 8 7 11 11 O 1.21572 * 119.99543 * 179.97438 * 10 9 8 12 12 N 1.34779 * 120.00047 * 359.97438 * 10 9 8 13 13 C 1.46493 * 119.99658 * 180.02562 * 12 10 9 14 14 C 1.52999 * 109.46930 * 180.75629 * 13 12 10 15 15 C 1.50693 * 112.91041 * 293.93767 * 14 13 12 16 16 C 1.38238 * 120.00347 * 124.49964 * 15 14 13 17 17 C 1.38228 * 120.00186 * 179.76967 * 16 15 14 18 18 C 1.38240 * 119.99974 * 0.50391 * 17 16 15 19 19 C 1.38233 * 119.99823 * 359.75173 * 18 17 16 20 20 C 1.38232 * 120.00247 * 359.97438 * 19 18 17 21 21 C 1.53956 * 113.61338 * 162.61159 * 14 13 12 22 22 C 1.53780 * 87.11445 * 270.84174 * 21 14 13 23 23 H 1.09007 * 113.60908 * 89.18638 * 22 21 14 24 24 F 1.39892 * 113.61859 * 220.08866 * 22 21 14 25 25 C 1.53777 * 113.61507 * 65.19224 * 14 13 12 26 26 C 1.37865 * 119.93988 * 15.31536 * 4 2 1 27 27 H 0.96703 * 113.99947 * 300.00529 * 1 2 3 28 28 H 1.09001 * 109.46783 * 240.00084 * 2 1 3 29 29 H 1.48505 * 109.99983 * 300.00123 * 3 2 1 30 30 H 1.48501 * 109.99919 * 61.32081 * 3 2 1 31 31 H 1.07993 * 119.93761 * 180.02562 * 7 5 4 32 32 H 1.08003 * 120.05649 * 180.02562 * 8 7 5 33 33 H 0.96998 * 119.99822 * 0.02562 * 12 10 9 34 34 H 1.09001 * 109.47201 * 60.75723 * 13 12 10 35 35 H 1.08998 * 109.47655 * 300.75541 * 13 12 10 36 36 H 1.08001 * 119.99270 * 0.02562 * 16 15 14 37 37 H 1.08000 * 120.00301 * 180.22814 * 17 16 15 38 38 H 1.08001 * 119.99834 * 179.72584 * 18 17 16 39 39 H 1.08003 * 119.99922 * 179.97438 * 19 18 17 40 40 H 1.07995 * 120.00269 * 179.97438 * 20 19 18 41 41 H 1.09005 * 113.53902 * 156.29100 * 21 14 13 42 42 H 1.09007 * 113.74706 * 25.42401 * 21 14 13 43 43 H 1.09002 * 113.61650 * 334.56500 * 25 14 13 44 44 H 1.09000 * 113.61650 * 203.75185 * 25 14 13 45 45 H 1.07998 * 120.06063 * 0.02562 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 3.2560 -0.5740 1.6158 6 9 4.0930 0.1964 0.8871 7 6 3.7247 -1.2247 2.7472 8 6 2.8747 -2.0105 3.4950 9 6 1.5392 -2.1515 3.1113 10 6 0.6234 -2.9921 3.9094 11 8 -0.5388 -3.1129 3.5736 12 7 1.0763 -3.6251 5.0097 13 6 0.1682 -4.4591 5.8008 14 6 0.9232 -5.0425 6.9968 15 6 2.0031 -6.0126 6.5924 16 6 3.3050 -5.8119 7.0116 17 6 4.2947 -6.7044 6.6445 18 6 3.9844 -7.7920 5.8496 19 6 2.6835 -7.9898 5.4260 20 6 1.6928 -7.1004 5.7977 21 6 0.0007 -5.5732 8.1092 22 6 0.0390 -4.1578 8.7092 23 1 -0.7411 -3.5000 8.3261 24 9 0.1267 -4.1431 10.1053 25 6 1.3946 -3.9812 8.0049 26 6 1.0744 -1.5003 1.9670 27 1 -0.3933 0.4418 0.7650 28 1 1.7922 -0.5138 -0.8900 29 1 1.5615 2.4679 -1.2085 30 1 1.5880 2.4585 1.2243 31 1 4.7575 -1.1146 3.0432 32 1 3.2407 -2.5165 4.3762 33 1 2.0035 -3.5284 5.2778 34 1 -0.2128 -5.2706 5.1807 35 1 -0.6644 -3.8527 6.1574 36 1 3.5480 -4.9600 7.6293 37 1 5.3111 -6.5497 6.9751 38 1 4.7585 -8.4869 5.5592 39 1 2.4412 -8.8393 4.8046 40 1 0.6765 -7.2547 5.4665 41 1 0.4697 -6.3280 8.7406 42 1 -0.9866 -5.8711 7.7559 43 1 1.5331 -2.9931 7.5660 44 1 2.2449 -4.2992 8.6082 45 1 0.0440 -1.6103 1.6627 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13458982_12496548.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:27:12 Heat of formation + Delta-G solvation = -70.847137 kcal Electronic energy + Delta-G solvation = -31893.503019 eV Core-core repulsion = 27286.425912 eV Total energy + Delta-G solvation = -4607.077106 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.132 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -50.28191 -48.58039 -41.82536 -40.99527 -39.67743 -38.73197 -37.82359 -35.52687 -32.88753 -32.15241 -31.89133 -31.83041 -28.73935 -27.17186 -26.99223 -25.37338 -24.34626 -23.26867 -23.21944 -22.47436 -21.51107 -20.12494 -19.22307 -18.59481 -18.49560 -17.96631 -17.82267 -17.38317 -17.06053 -16.81781 -16.58537 -16.30736 -16.17264 -15.99752 -15.82200 -15.60130 -15.50156 -15.15169 -15.08786 -14.63213 -14.52291 -14.32718 -14.28713 -14.23325 -13.92746 -13.67671 -13.56811 -13.39854 -13.26816 -12.86239 -12.50942 -12.49135 -12.45077 -12.16781 -11.97661 -11.72948 -11.35526 -11.30107 -11.24744 -11.02314 -10.30895 -10.04002 -9.81868 -9.74888 -9.63583 -4.84822 -0.50852 0.01055 0.40964 0.50254 1.16065 1.49860 1.59836 1.85192 1.93482 2.57495 2.82075 2.94833 3.14455 3.14983 3.24279 3.31725 3.41384 3.51345 3.60578 3.65281 3.68424 3.86419 3.97369 4.09851 4.11403 4.13661 4.20432 4.29219 4.40828 4.47308 4.53875 4.63588 4.64654 4.66000 4.70426 4.73523 4.79516 4.86128 4.88685 4.95898 5.00737 5.07455 5.10505 5.15564 5.24297 5.28140 5.59156 5.61104 5.64966 5.65998 6.10385 6.32672 6.36582 7.04436 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.545 6.545 2 C -0.079 4.079 3 Si 0.744 3.256 4 C -0.163 4.163 5 C 0.119 3.881 6 F -0.100 7.100 7 C -0.141 4.141 8 C -0.048 4.048 9 C -0.153 4.153 10 C 0.560 3.440 11 O -0.576 6.576 12 N -0.704 5.704 13 C 0.145 3.855 14 C -0.041 4.041 15 C -0.072 4.072 16 C -0.121 4.121 17 C -0.123 4.123 18 C -0.132 4.132 19 C -0.131 4.131 20 C -0.122 4.122 21 C -0.139 4.139 22 C 0.055 3.945 23 H 0.122 0.878 24 F -0.223 7.223 25 C -0.148 4.148 26 C -0.038 4.038 27 H 0.387 0.613 28 H 0.133 0.867 29 H -0.290 1.290 30 H -0.284 1.284 31 H 0.180 0.820 32 H 0.169 0.831 33 H 0.414 0.586 34 H 0.069 0.931 35 H 0.079 0.921 36 H 0.144 0.856 37 H 0.138 0.862 38 H 0.131 0.869 39 H 0.127 0.873 40 H 0.121 0.879 41 H 0.096 0.904 42 H 0.094 0.906 43 H 0.099 0.901 44 H 0.110 0.890 45 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.279 -0.929 2.900 7.890 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.353 6.353 2 C -0.188 4.188 3 Si 0.648 3.352 4 C -0.164 4.164 5 C 0.100 3.900 6 F -0.078 7.078 7 C -0.159 4.159 8 C -0.066 4.066 9 C -0.156 4.156 10 C 0.348 3.652 11 O -0.457 6.457 12 N -0.357 5.357 13 C 0.022 3.978 14 C -0.041 4.041 15 C -0.072 4.072 16 C -0.139 4.139 17 C -0.141 4.141 18 C -0.149 4.149 19 C -0.149 4.149 20 C -0.140 4.140 21 C -0.177 4.177 22 C 0.019 3.981 23 H 0.140 0.860 24 F -0.204 7.204 25 C -0.185 4.185 26 C -0.057 4.057 27 H 0.237 0.763 28 H 0.151 0.849 29 H -0.218 1.218 30 H -0.210 1.210 31 H 0.197 0.803 32 H 0.186 0.814 33 H 0.252 0.748 34 H 0.088 0.912 35 H 0.097 0.903 36 H 0.162 0.838 37 H 0.156 0.844 38 H 0.149 0.851 39 H 0.145 0.855 40 H 0.139 0.861 41 H 0.115 0.885 42 H 0.112 0.888 43 H 0.118 0.882 44 H 0.128 0.872 45 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges 6.359 -0.493 2.160 6.734 hybrid contribution -0.985 -0.297 0.347 1.086 sum 5.375 -0.790 2.507 5.983 Atomic orbital electron populations 1.86573 1.17917 1.80449 1.50331 1.25063 0.83997 1.11492 0.98235 0.94112 0.91594 0.71937 0.77573 1.20316 0.93591 1.02388 1.00119 1.17796 0.86819 0.93347 0.92065 1.91198 1.69466 1.71147 1.76036 1.21443 1.03166 0.97750 0.93571 1.21482 0.90464 0.95377 0.99303 1.19944 0.95285 1.02462 0.97947 1.18335 0.86897 0.79326 0.80615 1.90807 1.19638 1.64530 1.70700 1.45633 1.15048 1.48654 1.26316 1.21159 0.91818 0.94199 0.90634 1.20573 0.95071 0.95418 0.93076 1.19444 0.93939 0.95537 0.98312 1.21353 0.91907 1.00386 1.00245 1.21440 1.00356 0.94538 0.97751 1.21454 0.96822 0.98491 0.98180 1.21368 0.93528 0.99711 1.00255 1.21114 0.99705 0.94879 0.98278 1.23666 1.01175 0.96786 0.96089 1.23348 1.00709 0.99546 0.74497 0.86018 1.92788 1.97442 1.97569 1.32621 1.23807 0.97549 1.00279 0.96869 1.20874 1.00449 0.92244 0.92124 0.76336 0.84928 1.21757 1.20978 0.80268 0.81379 0.74827 0.91248 0.90330 0.83805 0.84366 0.85140 0.85525 0.86061 0.88503 0.88784 0.88246 0.87196 0.84682 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -2.32 11.64 -148.98 -1.73 -4.05 16 2 C -0.08 -0.09 2.96 71.24 0.21 0.12 16 3 Si 0.74 0.65 29.57 68.60 2.03 2.68 16 4 C -0.16 -0.05 5.13 -19.86 -0.10 -0.15 16 5 C 0.12 -0.36 6.67 22.47 0.15 -0.21 16 6 F -0.10 0.41 13.70 44.97 0.62 1.02 16 7 C -0.14 1.03 10.01 22.28 0.22 1.25 16 8 C -0.05 0.34 9.54 22.52 0.21 0.55 16 9 C -0.15 0.03 5.87 -20.09 -0.12 -0.09 16 10 C 0.56 1.59 7.77 86.75 0.67 2.26 16 11 O -0.58 -6.76 16.34 -3.94 -0.06 -6.83 16 12 N -0.70 2.79 5.11 -466.10 -2.38 0.41 16 13 C 0.15 -0.53 4.77 86.38 0.41 -0.12 16 14 C -0.04 0.26 0.68 -52.35 -0.04 0.22 16 15 C -0.07 0.31 4.69 -19.87 -0.09 0.22 16 16 C -0.12 0.67 9.14 22.27 0.20 0.87 16 17 C -0.12 0.52 10.05 22.27 0.22 0.74 16 18 C -0.13 0.31 10.05 22.27 0.22 0.53 16 19 C -0.13 0.16 10.05 22.27 0.22 0.38 16 20 C -0.12 0.21 9.28 22.27 0.21 0.42 16 21 C -0.14 0.67 7.11 31.18 0.22 0.90 16 22 C 0.05 -0.22 5.32 31.12 0.17 -0.05 16 23 H 0.12 -0.77 7.62 -2.38 -0.02 -0.79 16 24 F -0.22 -0.70 17.41 44.97 0.78 0.09 16 25 C -0.15 1.13 6.24 31.12 0.19 1.32 16 26 C -0.04 -0.10 8.78 22.52 0.20 0.10 16 27 H 0.39 -0.40 8.44 -74.06 -0.63 -1.02 16 28 H 0.13 -0.07 7.96 -2.39 -0.02 -0.09 16 29 H -0.29 -2.20 7.11 99.48 0.71 -1.49 16 30 H -0.28 -1.51 7.11 99.48 0.71 -0.80 16 31 H 0.18 -2.38 8.06 -2.91 -0.02 -2.40 16 32 H 0.17 -2.34 6.40 -2.91 -0.02 -2.36 16 33 H 0.41 -3.83 6.25 -92.71 -0.58 -4.41 16 34 H 0.07 -0.07 7.27 -2.39 -0.02 -0.08 16 35 H 0.08 -0.25 7.32 -2.39 -0.02 -0.26 16 36 H 0.14 -1.39 5.96 -2.91 -0.02 -1.40 16 37 H 0.14 -1.06 8.06 -2.91 -0.02 -1.08 16 38 H 0.13 -0.63 8.06 -2.91 -0.02 -0.65 16 39 H 0.13 -0.38 8.06 -2.91 -0.02 -0.41 16 40 H 0.12 -0.30 7.46 -2.91 -0.02 -0.32 16 41 H 0.10 -0.30 8.09 -2.38 -0.02 -0.32 16 42 H 0.09 -0.56 8.11 -2.38 -0.02 -0.58 16 43 H 0.10 -1.01 7.90 -2.39 -0.02 -1.03 16 44 H 0.11 -0.88 6.23 -2.39 -0.01 -0.90 16 45 H 0.14 0.79 6.67 -2.91 -0.02 0.77 16 Total: 0.00 -19.59 376.01 2.54 -17.05 By element: Atomic # 1 Polarization: -19.53 SS G_CDS: -0.11 Total: -19.64 kcal Atomic # 6 Polarization: 5.88 SS G_CDS: 3.40 Total: 9.27 kcal Atomic # 7 Polarization: 2.79 SS G_CDS: -2.38 Total: 0.41 kcal Atomic # 8 Polarization: -9.08 SS G_CDS: -1.80 Total: -10.88 kcal Atomic # 9 Polarization: -0.29 SS G_CDS: 1.40 Total: 1.11 kcal Atomic # 14 Polarization: 0.65 SS G_CDS: 2.03 Total: 2.68 kcal Total: -19.59 2.54 -17.05 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13458982_12496548.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -53.800 kcal (2) G-P(sol) polarization free energy of solvation -19.585 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -73.385 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.538 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.047 kcal (6) G-S(sol) free energy of system = (1) + (5) -70.847 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds