Wall clock time and date at job start Sat Mar 6 2021 21:27:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86293 * 109.47454 * 2 1 4 4 C 1.50704 * 109.46725 * 119.99987 * 2 1 3 5 5 C 1.38901 * 119.67192 * 244.99985 * 4 2 1 6 6 C 1.36469 * 120.61535 * 179.97438 * 5 4 2 7 7 C 1.40065 * 119.83235 * 0.29665 * 6 5 4 8 8 C 1.41590 * 133.38138 * 180.40621 * 7 6 5 9 9 C 1.35863 * 107.72916 * 179.48189 * 8 7 6 10 10 C 1.47062 * 125.42864 * 179.74558 * 9 8 7 11 11 O 1.21648 * 119.99640 * 0.02562 * 10 9 8 12 12 N 1.34776 * 120.00236 * 180.02562 * 10 9 8 13 13 C 1.46496 * 120.00318 * 179.97438 * 12 10 9 14 14 C 1.52994 * 109.47312 * 175.11250 * 13 12 10 15 15 C 1.50704 * 112.85020 * 294.00655 * 14 13 12 16 16 C 1.38235 * 119.99743 * 113.51244 * 15 14 13 17 17 C 1.38236 * 120.00019 * 179.79113 * 16 15 14 18 18 C 1.38236 * 119.99536 * 0.44117 * 17 16 15 19 19 C 1.38229 * 120.00259 * 359.81107 * 18 17 16 20 20 C 1.38230 * 120.00040 * 293.79033 * 15 14 13 21 21 C 1.53782 * 113.61727 * 162.70396 * 14 13 12 22 22 C 1.53781 * 87.08061 * 270.88546 * 21 14 13 23 23 H 1.08994 * 113.61742 * 89.11476 * 22 21 14 24 24 F 1.39899 * 113.61149 * 220.01856 * 22 21 14 25 25 C 1.53780 * 113.61753 * 65.20237 * 14 13 12 26 26 N 1.38151 * 109.14882 * 359.76785 * 9 8 7 27 27 C 1.37495 * 108.78785 * 359.97438 * 26 9 8 28 28 C 1.37713 * 119.67941 * 64.97074 * 4 2 1 29 29 H 0.96705 * 113.99945 * 300.00833 * 1 2 3 30 30 H 1.09000 * 109.47129 * 239.99258 * 2 1 3 31 31 H 1.48498 * 110.00292 * 178.68168 * 3 2 1 32 32 H 1.48504 * 109.99793 * 299.99268 * 3 2 1 33 33 H 1.08003 * 119.69254 * 359.97438 * 5 4 2 34 34 H 1.08007 * 120.08933 * 180.02562 * 6 5 4 35 35 H 1.07994 * 126.13673 * 359.24540 * 8 7 6 36 36 H 0.97003 * 119.99619 * 0.02562 * 12 10 9 37 37 H 1.08998 * 109.47423 * 295.11218 * 13 12 10 38 38 H 1.08998 * 109.47140 * 55.10898 * 13 12 10 39 39 H 1.08004 * 120.00082 * 0.02562 * 16 15 14 40 40 H 1.07995 * 120.00111 * 180.27029 * 17 16 15 41 41 H 1.08006 * 120.00010 * 179.83394 * 18 17 16 42 42 H 1.08003 * 120.00261 * 180.02562 * 19 18 17 43 43 H 1.07997 * 120.00090 * 359.97311 * 20 15 14 44 44 H 1.09006 * 113.61108 * 25.42876 * 21 14 13 45 45 H 1.08991 * 113.61865 * 156.33205 * 21 14 13 46 46 H 1.08994 * 113.61705 * 203.66344 * 25 14 13 47 47 H 1.08996 * 113.61512 * 334.48999 * 25 14 13 48 48 H 0.96997 * 125.60912 * 180.02562 * 26 9 8 49 49 H 1.08000 * 120.09149 * 359.97438 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9312 -0.7104 1.2305 5 6 2.6413 -0.0023 2.1917 6 6 3.1045 -0.6263 3.3135 7 6 2.8688 -1.9946 3.4974 8 6 3.2009 -2.9090 4.5262 9 6 2.7013 -4.1234 4.1775 10 6 2.8284 -5.3566 4.9686 11 8 3.4206 -5.3392 6.0311 12 7 2.2887 -6.5058 4.5166 13 6 2.4157 -7.7344 5.3044 14 6 1.6184 -8.8549 4.6339 15 6 0.1329 -8.6013 4.6412 16 6 -0.5364 -8.3809 3.4519 17 6 -1.8998 -8.1525 3.4581 18 6 -2.5922 -8.1355 4.6544 19 6 -1.9221 -8.3508 5.8440 20 6 -0.5594 -8.5834 5.8375 21 6 2.0072 -10.2620 5.1174 22 6 3.0615 -10.2697 3.9978 23 1 4.0240 -9.8583 4.3016 24 9 3.1774 -11.5020 3.3458 25 6 2.1670 -9.2622 3.2563 26 7 2.0555 -4.0154 2.9610 27 6 2.1433 -2.7137 2.5271 28 6 1.6812 -2.0551 1.3913 29 1 -0.3933 0.4418 0.7650 30 1 1.7923 -0.5139 -0.8899 31 1 3.5346 1.7702 0.0321 32 1 1.5617 2.4677 -1.2086 33 1 2.8285 1.0518 2.0498 34 1 3.6554 -0.0673 4.0556 35 1 3.7553 -2.6827 5.4249 36 1 1.8168 -6.5197 3.6692 37 1 3.4656 -8.0210 5.3639 38 1 2.0283 -7.5636 6.3088 39 1 0.0052 -8.3908 2.5175 40 1 -2.4234 -7.9847 2.5286 41 1 -3.6570 -7.9545 4.6595 42 1 -2.4632 -8.3379 6.7787 43 1 -0.0358 -8.7516 6.7669 44 1 2.4349 -10.2766 6.1199 45 1 1.2202 -11.0036 4.9811 46 1 1.4236 -9.7304 2.6112 47 1 2.7225 -8.4692 2.7557 48 1 1.6122 -4.7388 2.4908 49 1 1.1274 -2.5967 0.6388 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13458982_13158378.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:27:39 Heat of formation + Delta-G solvation = -0.414291 kcal Electronic energy + Delta-G solvation = -34187.606493 eV Core-core repulsion = 29575.621749 eV Total energy + Delta-G solvation = -4611.984744 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 381.153 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -48.62028 -42.73383 -41.74668 -40.30476 -39.07575 -38.82189 -36.91568 -35.54108 -33.30783 -32.24872 -32.03219 -31.29459 -30.43910 -28.99519 -27.40205 -26.66499 -25.27740 -24.16536 -23.41763 -23.04617 -22.68161 -22.00751 -21.25936 -20.34075 -19.38716 -18.55876 -18.43224 -17.84841 -17.66783 -17.04063 -16.85415 -16.73447 -16.52772 -16.26605 -16.13208 -15.81548 -15.63493 -15.57048 -15.47271 -15.35024 -14.96279 -14.78430 -14.60105 -14.48117 -14.46418 -14.41894 -14.06870 -13.78701 -13.71436 -13.55778 -13.17949 -12.70150 -12.63034 -12.58986 -12.55897 -12.37951 -12.00539 -11.97784 -11.68521 -11.53594 -11.48207 -11.32367 -10.95395 -10.47688 -10.36629 -9.98978 -9.81264 -9.34737 -8.85263 -5.02147 -0.36675 0.24460 0.32884 0.49742 0.97759 1.27698 1.64944 1.70520 1.83148 1.99079 2.22980 2.65509 2.75320 2.91103 3.01621 3.19790 3.31686 3.39670 3.42095 3.56829 3.61847 3.67437 3.68466 3.89356 3.92843 3.98128 3.99463 4.09669 4.21128 4.26311 4.30253 4.37028 4.39372 4.41938 4.43796 4.45943 4.49122 4.52083 4.58356 4.61482 4.74856 4.86778 4.90916 4.93630 4.95458 5.05442 5.06503 5.30573 5.37608 5.40675 5.45932 5.48794 5.49883 5.58563 5.91205 5.93596 6.13446 6.28887 6.54179 6.92622 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.068 4.068 3 Si 0.690 3.310 4 C -0.088 4.088 5 C -0.145 4.145 6 C -0.050 4.050 7 C -0.116 4.116 8 C -0.099 4.099 9 C 0.013 3.987 10 C 0.586 3.414 11 O -0.516 6.516 12 N -0.724 5.724 13 C 0.146 3.854 14 C -0.056 4.056 15 C -0.069 4.069 16 C -0.121 4.121 17 C -0.116 4.116 18 C -0.119 4.119 19 C -0.114 4.114 20 C -0.108 4.108 21 C -0.139 4.139 22 C 0.066 3.934 23 H 0.112 0.888 24 F -0.203 7.203 25 C -0.155 4.155 26 N -0.578 5.578 27 C 0.116 3.884 28 C -0.104 4.104 29 H 0.380 0.620 30 H 0.113 0.887 31 H -0.257 1.257 32 H -0.256 1.256 33 H 0.130 0.870 34 H 0.133 0.867 35 H 0.159 0.841 36 H 0.397 0.603 37 H 0.079 0.921 38 H 0.084 0.916 39 H 0.122 0.878 40 H 0.123 0.877 41 H 0.123 0.877 42 H 0.124 0.876 43 H 0.123 0.877 44 H 0.089 0.911 45 H 0.104 0.896 46 H 0.104 0.896 47 H 0.083 0.917 48 H 0.416 0.584 49 H 0.126 0.874 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.540 0.940 0.295 2.724 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.346 6.346 2 C -0.179 4.179 3 Si 0.592 3.408 4 C -0.090 4.090 5 C -0.163 4.163 6 C -0.069 4.069 7 C -0.121 4.121 8 C -0.126 4.126 9 C -0.096 4.096 10 C 0.373 3.627 11 O -0.391 6.391 12 N -0.376 5.376 13 C 0.023 3.977 14 C -0.057 4.057 15 C -0.069 4.069 16 C -0.139 4.139 17 C -0.134 4.134 18 C -0.137 4.137 19 C -0.132 4.132 20 C -0.126 4.126 21 C -0.177 4.177 22 C 0.030 3.970 23 H 0.130 0.870 24 F -0.184 7.184 25 C -0.193 4.193 26 N -0.183 5.183 27 C 0.006 3.994 28 C -0.125 4.125 29 H 0.227 0.773 30 H 0.130 0.870 31 H -0.181 1.181 32 H -0.181 1.181 33 H 0.147 0.853 34 H 0.150 0.850 35 H 0.176 0.824 36 H 0.231 0.769 37 H 0.097 0.903 38 H 0.102 0.898 39 H 0.140 0.860 40 H 0.141 0.859 41 H 0.141 0.859 42 H 0.142 0.858 43 H 0.141 0.859 44 H 0.108 0.892 45 H 0.122 0.878 46 H 0.123 0.877 47 H 0.101 0.899 48 H 0.254 0.746 49 H 0.144 0.856 Dipole moment (debyes) X Y Z Total from point charges -1.567 1.016 0.078 1.869 hybrid contribution -0.505 -1.195 -0.882 1.569 sum -2.073 -0.180 -0.803 2.230 Atomic orbital electron populations 1.86505 1.17044 1.81721 1.49320 1.25079 0.85261 1.10297 0.97262 0.94597 0.81204 0.77909 0.87058 1.20035 0.98742 0.93541 0.96660 1.20463 1.01563 0.99393 0.94898 1.20387 0.97519 0.91942 0.97050 1.18220 1.03657 0.94380 0.95835 1.20973 1.01938 0.89904 0.99735 1.20056 1.04924 0.95911 0.88682 1.17157 0.78992 0.81646 0.84946 1.90891 1.41746 1.84897 1.21559 1.45743 1.57945 1.08883 1.25001 1.21194 0.99826 0.81588 0.95097 1.20771 0.92135 0.95133 0.97620 1.19371 0.93274 1.00625 0.93652 1.21052 0.94649 1.00772 0.97436 1.21181 0.94262 0.99643 0.98304 1.21246 1.00232 0.99590 0.92631 1.21208 0.94446 0.99122 0.98428 1.20980 0.94398 0.99750 0.97519 1.23643 0.99004 0.95306 0.99729 1.23079 0.99458 0.80943 0.93513 0.86983 1.92835 1.97537 1.45392 1.82591 1.23798 0.99645 0.99433 0.96405 1.41890 1.48921 1.09003 1.18488 1.18306 1.00588 0.83926 0.96571 1.19863 1.02715 0.93914 0.95960 0.77274 0.86952 1.18144 1.18108 0.85310 0.84961 0.82361 0.76910 0.90310 0.89773 0.85981 0.85872 0.85904 0.85793 0.85946 0.89213 0.87778 0.87715 0.89852 0.74581 0.85612 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.14 12.83 -35.23 -0.45 -0.31 16 2 C -0.07 0.05 2.79 36.01 0.10 0.15 16 3 Si 0.69 -0.94 29.76 -169.99 -5.06 -6.00 16 4 C -0.09 0.02 5.36 -104.57 -0.56 -0.54 16 5 C -0.14 0.10 8.59 -39.97 -0.34 -0.24 16 6 C -0.05 0.00 10.06 -39.53 -0.40 -0.40 16 7 C -0.12 -0.16 6.16 -106.93 -0.66 -0.82 16 8 C -0.10 -0.16 10.53 -39.16 -0.41 -0.57 16 9 C 0.01 0.01 6.97 -82.29 -0.57 -0.56 16 10 C 0.59 0.87 7.80 -12.68 -0.10 0.77 16 11 O -0.52 -2.57 16.84 5.23 0.09 -2.49 16 12 N -0.72 1.14 5.17 -61.51 -0.32 0.82 16 13 C 0.15 -0.27 4.85 -4.05 -0.02 -0.29 16 14 C -0.06 0.16 0.63 -154.85 -0.10 0.06 16 15 C -0.07 0.11 4.67 -104.62 -0.49 -0.38 16 16 C -0.12 0.21 9.05 -39.58 -0.36 -0.15 16 17 C -0.12 0.13 10.05 -39.58 -0.40 -0.27 16 18 C -0.12 0.08 10.05 -39.59 -0.40 -0.32 16 19 C -0.11 0.07 10.05 -39.59 -0.40 -0.33 16 20 C -0.11 0.09 9.33 -39.58 -0.37 -0.28 16 21 C -0.14 0.35 7.00 -25.92 -0.18 0.16 16 22 C 0.07 -0.12 5.32 -25.91 -0.14 -0.26 16 23 H 0.11 -0.34 7.61 -51.93 -0.40 -0.74 16 24 F -0.20 -0.33 17.41 2.25 0.04 -0.29 16 25 C -0.16 0.47 5.97 -25.91 -0.15 0.31 16 26 N -0.58 0.47 6.07 -7.35 -0.04 0.43 16 27 C 0.12 0.09 7.25 -83.97 -0.61 -0.52 16 28 C -0.10 -0.02 9.69 -39.42 -0.38 -0.41 16 29 H 0.38 -1.51 8.70 45.56 0.40 -1.12 16 30 H 0.11 -0.04 7.96 -51.93 -0.41 -0.45 16 31 H -0.26 -0.27 7.11 56.52 0.40 0.13 16 32 H -0.26 -0.50 7.11 56.52 0.40 -0.10 16 33 H 0.13 -0.35 4.85 -52.48 -0.25 -0.60 16 34 H 0.13 -0.27 8.06 -52.48 -0.42 -0.69 16 35 H 0.16 0.15 8.06 -52.49 -0.42 -0.27 16 36 H 0.40 -1.39 7.13 -40.82 -0.29 -1.69 16 37 H 0.08 -0.16 7.31 -51.93 -0.38 -0.54 16 38 H 0.08 -0.07 7.95 -51.93 -0.41 -0.49 16 39 H 0.12 -0.42 6.44 -52.48 -0.34 -0.76 16 40 H 0.12 -0.31 8.06 -52.49 -0.42 -0.74 16 41 H 0.12 -0.24 8.06 -52.48 -0.42 -0.66 16 42 H 0.12 -0.23 8.06 -52.48 -0.42 -0.65 16 43 H 0.12 -0.22 8.06 -52.49 -0.42 -0.65 16 44 H 0.09 -0.30 8.10 -51.93 -0.42 -0.72 16 45 H 0.10 -0.18 8.09 -51.93 -0.42 -0.60 16 46 H 0.10 -0.28 6.83 -51.93 -0.35 -0.64 16 47 H 0.08 -0.32 7.75 -51.93 -0.40 -0.72 16 48 H 0.42 -1.51 8.12 -40.82 -0.33 -1.84 16 49 H 0.13 -0.08 8.06 -52.49 -0.42 -0.51 16 LS Contribution 407.69 15.07 6.14 6.14 Total: 0.00 -8.89 407.69 -12.71 -21.60 By element: Atomic # 1 Polarization: -8.86 SS G_CDS: -6.18 Total: -15.03 kcal Atomic # 6 Polarization: 2.07 SS G_CDS: -6.93 Total: -4.87 kcal Atomic # 7 Polarization: 1.61 SS G_CDS: -0.36 Total: 1.24 kcal Atomic # 8 Polarization: -2.43 SS G_CDS: -0.36 Total: -2.80 kcal Atomic # 9 Polarization: -0.33 SS G_CDS: 0.04 Total: -0.29 kcal Atomic # 14 Polarization: -0.94 SS G_CDS: -5.06 Total: -6.00 kcal Total LS contribution 6.14 Total: 6.14 kcal Total: -8.89 -12.71 -21.60 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13458982_13158378.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 21.187 kcal (2) G-P(sol) polarization free energy of solvation -8.888 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 12.299 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.714 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.602 kcal (6) G-S(sol) free energy of system = (1) + (5) -0.414 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds