Wall clock time and date at job start Sat Mar 6 2021 21:27:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86303 * 109.46982 * 2 1 4 4 C 1.50693 * 109.47608 * 239.99829 * 2 1 3 5 5 C 1.34190 * 126.54492 * 105.00089 * 4 2 1 6 6 N 1.36869 * 109.96901 * 179.46973 * 5 4 2 7 7 C 1.37401 * 109.97655 * 0.63933 * 6 5 4 8 8 C 1.39332 * 133.24946 * 179.29439 * 7 6 5 9 9 C 1.36340 * 120.23748 * 180.02562 * 8 7 6 10 10 C 1.40168 * 120.66947 * 359.97438 * 9 8 7 11 11 C 1.47659 * 119.97473 * 180.02562 * 10 9 8 12 12 O 1.21575 * 119.99973 * 180.02562 * 11 10 9 13 13 N 1.34772 * 119.99968 * 0.02562 * 11 10 9 14 14 C 1.46500 * 120.00263 * 179.97438 * 13 11 10 15 15 C 1.52999 * 109.47433 * 175.92566 * 14 13 11 16 16 C 1.50697 * 112.84645 * 65.11661 * 15 14 13 17 17 C 1.38235 * 119.99743 * 245.83651 * 16 15 14 18 18 C 1.38240 * 119.99947 * 179.74493 * 17 16 15 19 19 C 1.38238 * 119.99569 * 0.55807 * 18 17 16 20 20 C 1.38239 * 120.00016 * 359.69717 * 19 18 17 21 21 C 1.38228 * 119.99845 * 0.02562 * 20 19 18 22 22 C 1.53785 * 113.61383 * 293.92002 * 15 14 13 23 23 C 1.53777 * 87.08042 * 270.88408 * 22 15 14 24 24 H 1.08994 * 113.61528 * 89.20407 * 23 22 15 25 25 F 1.39906 * 113.61234 * 220.01822 * 23 22 15 26 26 C 1.53784 * 113.61566 * 196.31308 * 15 14 13 27 27 C 1.39190 * 120.05448 * 0.02562 * 10 9 8 28 28 C 1.39224 * 119.39145 * 0.25728 * 27 10 9 29 29 H 0.96699 * 113.99868 * 60.00650 * 1 2 3 30 30 H 1.09003 * 109.46725 * 119.99179 * 2 1 3 31 31 H 1.48504 * 109.99917 * 59.99845 * 3 2 1 32 32 H 1.48504 * 109.99799 * 181.31577 * 3 2 1 33 33 H 1.08004 * 125.01020 * 359.97438 * 5 4 2 34 34 H 0.96998 * 125.00447 * 179.97438 * 6 5 4 35 35 H 1.08003 * 119.87612 * 359.97438 * 8 7 6 36 36 H 1.08002 * 119.66596 * 179.97438 * 9 8 7 37 37 H 0.96998 * 120.00224 * 0.02562 * 13 11 10 38 38 H 1.08994 * 109.47515 * 295.93230 * 14 13 11 39 39 H 1.09010 * 109.46893 * 55.92873 * 14 13 11 40 40 H 1.08002 * 120.00400 * 0.02562 * 17 16 15 41 41 H 1.07998 * 120.00573 * 180.28051 * 18 17 16 42 42 H 1.08003 * 120.00030 * 179.72629 * 19 18 17 43 43 H 1.08007 * 119.99687 * 180.02562 * 20 19 18 44 44 H 1.08009 * 119.99606 * 179.97438 * 21 20 19 45 45 H 1.09004 * 113.61244 * 25.43508 * 22 15 14 46 46 H 1.08999 * 113.61198 * 156.32970 * 22 15 14 47 47 H 1.08995 * 113.61144 * 203.66501 * 26 15 14 48 48 H 1.08994 * 113.61230 * 334.57220 * 26 15 14 49 49 H 1.08002 * 120.30135 * 179.97438 * 27 10 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2303 5 6 2.4609 -0.1387 -2.3229 6 7 2.8139 -1.1013 -3.2296 7 6 2.5007 -2.3459 -2.7388 8 6 2.6343 -3.6351 -3.2502 9 6 2.2248 -4.7099 -2.5181 10 6 1.6657 -4.5364 -1.2445 11 6 1.2279 -5.7114 -0.4647 12 8 0.7425 -5.5614 0.6398 13 7 1.3664 -6.9501 -0.9773 14 6 0.9326 -8.1159 -0.2035 15 6 1.1050 -9.3808 -1.0468 16 6 2.5475 -9.6807 -1.3635 17 6 2.9953 -9.6195 -2.6699 18 6 4.3198 -9.8895 -2.9599 19 6 5.1936 -10.2318 -1.9449 20 6 4.7444 -10.2981 -0.6392 21 6 3.4214 -10.0226 -0.3486 22 6 0.1808 -9.4333 -2.2748 23 6 -0.8562 -10.1155 -1.3671 24 1 -1.5162 -9.4154 -0.8551 25 9 -1.5496 -11.1572 -1.9929 26 6 0.3283 -10.5927 -0.5055 27 6 1.5228 -3.2574 -0.7143 28 6 1.9347 -2.1578 -1.4622 29 1 -0.3933 0.4416 -0.7651 30 1 1.7923 -0.5137 0.8901 31 1 1.5614 2.4679 1.2085 32 1 3.5346 1.7703 -0.0320 33 1 2.5966 0.9236 -2.4623 34 1 3.2161 -0.9295 -4.0953 35 1 3.0630 -3.7834 -4.2303 36 1 2.3323 -5.7052 -2.9236 37 1 1.7540 -7.0698 -1.8584 38 1 1.5359 -8.1969 0.7006 39 1 -0.1167 -8.0012 0.0690 40 1 2.3116 -9.3565 -3.4635 41 1 4.6708 -9.8373 -3.9799 42 1 6.2273 -10.4470 -2.1719 43 1 5.4273 -10.5652 0.1539 44 1 3.0704 -10.0748 0.6715 45 1 -0.1293 -8.4505 -2.6302 46 1 0.5519 -10.0755 -3.0734 47 1 0.7397 -11.5514 -0.8213 48 1 0.1372 -10.5454 0.5665 49 1 1.0922 -3.1191 0.2665 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13458982_13287722.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:27:53 Heat of formation + Delta-G solvation = -1.015909 kcal Electronic energy + Delta-G solvation = -34327.243698 eV Core-core repulsion = 29715.232866 eV Total energy + Delta-G solvation = -4612.010832 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 381.153 amu Computer time = 0.96 seconds Orbital eigenvalues (eV) -48.51012 -42.50219 -41.67186 -40.33003 -38.85050 -37.89551 -37.38198 -35.27149 -33.27928 -32.14493 -31.94163 -31.05415 -30.56267 -28.41671 -27.20428 -26.48393 -25.34205 -24.17808 -23.49746 -23.29496 -22.58456 -21.44715 -20.81461 -20.03527 -19.29846 -18.58871 -18.25361 -17.63722 -17.41274 -17.26437 -16.84596 -16.62250 -16.22159 -16.20734 -15.92977 -15.73193 -15.57772 -15.51853 -15.31022 -15.16915 -14.97409 -14.76730 -14.52364 -14.40269 -14.34485 -14.04946 -13.82276 -13.69544 -13.63289 -13.53020 -13.42632 -12.59983 -12.54786 -12.49350 -12.29010 -12.27747 -12.18347 -11.88304 -11.86175 -11.39783 -11.35364 -10.85472 -10.79799 -10.32562 -10.07591 -9.90045 -9.71960 -9.33493 -8.84110 -5.08942 -0.05822 0.17679 0.33439 0.41552 1.30122 1.46228 1.64604 1.95798 1.99508 2.00269 2.10853 2.75026 2.96504 3.04748 3.16205 3.33792 3.44953 3.53772 3.57104 3.59198 3.73379 3.78956 3.80660 3.86869 3.99836 4.02128 4.06600 4.11849 4.17766 4.35128 4.41111 4.44070 4.47968 4.52197 4.54772 4.55362 4.58849 4.59587 4.67183 4.74031 4.78831 4.87997 5.00273 5.00941 5.04412 5.18352 5.23934 5.35749 5.39331 5.49269 5.51326 5.55838 5.57133 5.59019 5.96760 5.99955 6.34424 6.53355 6.69004 7.30937 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.540 6.540 2 C -0.034 4.034 3 Si 0.687 3.313 4 C -0.192 4.192 5 C 0.061 3.939 6 N -0.585 5.585 7 C 0.119 3.881 8 C -0.133 4.133 9 C -0.066 4.066 10 C -0.168 4.168 11 C 0.565 3.435 12 O -0.537 6.537 13 N -0.724 5.724 14 C 0.147 3.853 15 C -0.055 4.055 16 C -0.068 4.068 17 C -0.120 4.120 18 C -0.116 4.116 19 C -0.120 4.120 20 C -0.115 4.115 21 C -0.108 4.108 22 C -0.154 4.154 23 C 0.065 3.935 24 H 0.112 0.888 25 F -0.204 7.204 26 C -0.139 4.139 27 C 0.008 3.992 28 C -0.103 4.103 29 H 0.377 0.623 30 H 0.113 0.887 31 H -0.254 1.254 32 H -0.256 1.256 33 H 0.179 0.821 34 H 0.421 0.579 35 H 0.128 0.872 36 H 0.126 0.874 37 H 0.400 0.600 38 H 0.076 0.924 39 H 0.078 0.922 40 H 0.124 0.876 41 H 0.123 0.877 42 H 0.122 0.878 43 H 0.123 0.877 44 H 0.122 0.878 45 H 0.086 0.914 46 H 0.103 0.897 47 H 0.103 0.897 48 H 0.088 0.912 49 H 0.138 0.862 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.160 2.732 -6.636 7.841 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.344 6.344 2 C -0.146 4.146 3 Si 0.589 3.411 4 C -0.199 4.199 5 C -0.065 4.065 6 N -0.188 5.188 7 C 0.010 3.990 8 C -0.154 4.154 9 C -0.086 4.086 10 C -0.173 4.173 11 C 0.354 3.646 12 O -0.415 6.415 13 N -0.377 5.377 14 C 0.023 3.977 15 C -0.056 4.056 16 C -0.068 4.068 17 C -0.138 4.138 18 C -0.134 4.134 19 C -0.138 4.138 20 C -0.133 4.133 21 C -0.126 4.126 22 C -0.192 4.192 23 C 0.029 3.971 24 H 0.130 0.870 25 F -0.185 7.185 26 C -0.177 4.177 27 C -0.012 4.012 28 C -0.108 4.108 29 H 0.223 0.777 30 H 0.130 0.870 31 H -0.178 1.178 32 H -0.181 1.181 33 H 0.196 0.804 34 H 0.259 0.741 35 H 0.145 0.855 36 H 0.144 0.856 37 H 0.236 0.764 38 H 0.094 0.906 39 H 0.097 0.903 40 H 0.142 0.858 41 H 0.141 0.859 42 H 0.140 0.860 43 H 0.141 0.859 44 H 0.140 0.860 45 H 0.104 0.896 46 H 0.122 0.878 47 H 0.121 0.879 48 H 0.107 0.893 49 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges 3.417 3.148 -4.959 6.796 hybrid contribution 0.645 -0.748 -0.823 1.286 sum 4.062 2.400 -5.783 7.463 Atomic orbital electron populations 1.86538 1.17266 1.81727 1.48904 1.24413 0.84908 1.09006 0.96241 0.95338 0.80633 0.77175 0.87991 1.20761 1.09310 0.91963 0.97882 1.21684 1.00946 0.94269 0.89605 1.41737 1.54363 1.04129 1.18527 1.18430 0.99745 0.86526 0.94283 1.19655 1.05766 0.88868 1.01117 1.20566 0.96709 0.98276 0.93045 1.19518 1.08233 0.93238 0.96262 1.18152 0.78039 0.82748 0.85696 1.90804 1.44480 1.86030 1.20161 1.45750 1.64909 1.05494 1.21545 1.21122 1.01037 0.81901 0.93638 1.20772 0.91717 0.95620 0.97471 1.19399 0.93599 1.00200 0.93629 1.21077 0.95952 1.00895 0.95843 1.21171 0.93503 0.99323 0.99410 1.21229 0.99910 0.99624 0.93062 1.21192 0.95742 0.99548 0.96837 1.20976 0.93368 0.99293 0.99001 1.23784 0.95408 1.02708 0.97257 1.23147 0.91555 0.87685 0.94696 0.86992 1.92828 1.81614 1.60237 1.83803 1.23688 0.94550 0.98224 1.01281 1.20695 0.92443 0.89198 0.98846 1.18925 1.04508 0.92968 0.94353 0.77655 0.87016 1.17840 1.18098 0.80444 0.74113 0.85456 0.85584 0.76397 0.90560 0.90332 0.85820 0.85906 0.86016 0.85910 0.86014 0.89574 0.87841 0.87902 0.89327 0.84387 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.60 12.88 -35.23 -0.45 -1.05 16 2 C -0.03 -0.01 3.06 36.00 0.11 0.10 16 3 Si 0.69 -1.08 30.76 -169.99 -5.23 -6.31 16 4 C -0.19 -0.09 5.58 -102.69 -0.57 -0.66 16 5 C 0.06 -0.13 10.43 -16.73 -0.17 -0.31 16 6 N -0.59 1.26 6.05 -10.61 -0.06 1.20 16 7 C 0.12 0.06 7.27 -83.95 -0.61 -0.55 16 8 C -0.13 0.08 10.00 -39.86 -0.40 -0.32 16 9 C -0.07 0.01 9.46 -39.54 -0.37 -0.36 16 10 C -0.17 -0.41 5.87 -104.97 -0.62 -1.03 16 11 C 0.57 1.93 7.76 -12.42 -0.10 1.83 16 12 O -0.54 -3.85 16.33 5.30 0.09 -3.76 16 13 N -0.72 -0.15 5.14 -61.31 -0.32 -0.46 16 14 C 0.15 -0.05 4.84 -4.04 -0.02 -0.06 16 15 C -0.06 0.09 0.63 -154.85 -0.10 0.00 16 16 C -0.07 0.06 4.51 -104.63 -0.47 -0.42 16 17 C -0.12 0.14 9.05 -39.58 -0.36 -0.22 16 18 C -0.12 0.09 10.05 -39.58 -0.40 -0.31 16 19 C -0.12 0.03 10.05 -39.58 -0.40 -0.36 16 20 C -0.12 0.01 10.05 -39.58 -0.40 -0.39 16 21 C -0.11 0.02 9.34 -39.59 -0.37 -0.35 16 22 C -0.15 0.29 6.10 -25.92 -0.16 0.13 16 23 C 0.07 -0.05 5.32 -25.78 -0.14 -0.18 16 24 H 0.11 -0.20 7.61 -51.93 -0.40 -0.60 16 25 F -0.20 -0.50 17.41 2.25 0.04 -0.46 16 26 C -0.14 0.21 7.01 -25.77 -0.18 0.03 16 27 C 0.01 0.03 9.64 -38.86 -0.37 -0.35 16 28 C -0.10 -0.24 6.34 -105.16 -0.67 -0.91 16 29 H 0.38 -1.17 8.70 45.56 0.40 -0.78 16 30 H 0.11 0.17 7.96 -51.93 -0.41 -0.24 16 31 H -0.25 -0.53 7.11 56.52 0.40 -0.13 16 32 H -0.26 -0.20 7.11 56.52 0.40 0.20 16 33 H 0.18 -1.04 6.35 -52.48 -0.33 -1.37 16 34 H 0.42 -2.19 8.96 -40.82 -0.37 -2.56 16 35 H 0.13 -0.39 8.06 -52.48 -0.42 -0.81 16 36 H 0.13 -0.35 6.36 -52.49 -0.33 -0.68 16 37 H 0.40 -0.69 6.23 -40.82 -0.25 -0.94 16 38 H 0.08 0.04 7.97 -51.93 -0.41 -0.37 16 39 H 0.08 0.00 7.31 -51.92 -0.38 -0.38 16 40 H 0.12 -0.34 6.41 -52.49 -0.34 -0.68 16 41 H 0.12 -0.29 8.06 -52.49 -0.42 -0.71 16 42 H 0.12 -0.20 8.06 -52.48 -0.42 -0.62 16 43 H 0.12 -0.16 8.06 -52.48 -0.42 -0.58 16 44 H 0.12 -0.13 8.06 -52.48 -0.42 -0.55 16 45 H 0.09 -0.21 7.95 -51.93 -0.41 -0.62 16 46 H 0.10 -0.19 6.79 -51.93 -0.35 -0.54 16 47 H 0.10 -0.09 8.09 -51.93 -0.42 -0.51 16 48 H 0.09 -0.20 8.10 -51.93 -0.42 -0.62 16 49 H 0.14 0.64 7.64 -52.49 -0.40 0.24 16 LS Contribution 407.89 15.07 6.15 6.15 Total: 0.00 -10.58 407.89 -12.70 -23.28 By element: Atomic # 1 Polarization: -7.72 SS G_CDS: -6.15 Total: -13.87 kcal Atomic # 6 Polarization: 2.05 SS G_CDS: -6.76 Total: -4.71 kcal Atomic # 7 Polarization: 1.11 SS G_CDS: -0.38 Total: 0.73 kcal Atomic # 8 Polarization: -4.45 SS G_CDS: -0.37 Total: -4.81 kcal Atomic # 9 Polarization: -0.50 SS G_CDS: 0.04 Total: -0.46 kcal Atomic # 14 Polarization: -1.08 SS G_CDS: -5.23 Total: -6.31 kcal Total LS contribution 6.15 Total: 6.15 kcal Total: -10.58 -12.70 -23.28 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13458982_13287722.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 22.264 kcal (2) G-P(sol) polarization free energy of solvation -10.582 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 11.683 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.699 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.280 kcal (6) G-S(sol) free energy of system = (1) + (5) -1.016 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.96 seconds