Wall clock time and date at job start Sat Mar 6 2021 21:27:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86303 * 109.47441 * 2 1 4 4 C 1.50701 * 109.47283 * 239.99926 * 2 1 3 5 5 C 1.38561 * 120.32364 * 119.71816 * 4 2 1 6 6 N 1.31526 * 120.89946 * 179.72894 * 5 4 2 7 7 C 1.32719 * 121.64461 * 0.58621 * 6 5 4 8 8 C 1.48167 * 119.72433 * 179.70231 * 7 6 5 9 9 O 1.21506 * 120.00437 * 179.97438 * 8 7 6 10 10 N 1.34783 * 119.99820 * 359.97438 * 8 7 6 11 11 C 1.46497 * 119.99758 * 179.97438 * 10 8 7 12 12 C 1.53003 * 109.46946 * 175.10879 * 11 10 8 13 13 C 1.50700 * 112.85069 * 294.00670 * 12 11 10 14 14 C 1.38234 * 119.99943 * 113.50930 * 13 12 11 15 15 C 1.38237 * 119.99764 * 179.76529 * 14 13 12 16 16 C 1.38232 * 120.00173 * 0.51091 * 15 14 13 17 17 C 1.38244 * 120.00052 * 359.74555 * 16 15 14 18 18 C 1.38235 * 119.99836 * 359.97438 * 17 16 15 19 19 C 1.53781 * 113.61519 * 162.70234 * 12 11 10 20 20 C 1.53789 * 87.08214 * 270.88473 * 19 12 11 21 21 H 1.08998 * 113.61383 * 89.10951 * 20 19 12 22 22 F 1.39899 * 113.61439 * 220.02121 * 20 19 12 23 23 C 1.53778 * 113.61634 * 65.20518 * 12 11 10 24 24 C 1.39306 * 120.55272 * 359.68270 * 7 6 5 25 25 C 1.38590 * 119.06019 * 0.02562 * 24 7 6 26 26 H 0.96703 * 113.99893 * 60.00076 * 1 2 3 27 27 H 1.08999 * 109.47404 * 120.00369 * 2 1 3 28 28 H 1.48495 * 109.99919 * 59.99999 * 3 2 1 29 29 H 1.48499 * 110.00273 * 181.32075 * 3 2 1 30 30 H 1.07996 * 119.55177 * 0.02562 * 5 4 2 31 31 H 0.97001 * 119.99886 * 359.97438 * 10 8 7 32 32 H 1.09001 * 109.47208 * 295.10432 * 11 10 8 33 33 H 1.08996 * 109.47412 * 55.11338 * 11 10 8 34 34 H 1.07997 * 120.00204 * 0.02562 * 14 13 12 35 35 H 1.08000 * 119.99567 * 180.23454 * 15 14 13 36 36 H 1.07994 * 120.00135 * 179.72180 * 16 15 14 37 37 H 1.07997 * 120.00269 * 179.97438 * 17 16 15 38 38 H 1.07994 * 120.00249 * 179.97438 * 18 17 16 39 39 H 1.09001 * 113.61397 * 25.43002 * 19 12 11 40 40 H 1.09001 * 113.61969 * 156.33422 * 19 12 11 41 41 H 1.08997 * 113.61865 * 203.66503 * 23 12 11 42 42 H 1.09001 * 113.61439 * 334.56434 * 23 12 11 43 43 H 1.08000 * 120.47050 * 180.02562 * 24 7 6 44 44 H 1.07996 * 120.75527 * 179.97438 * 25 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2304 5 6 2.7235 -0.0418 -2.1498 6 7 3.1725 -0.6523 -3.2249 7 6 2.8787 -1.9214 -3.4788 8 6 3.4022 -2.5652 -4.7063 9 8 3.1368 -3.7270 -4.9435 10 7 4.1727 -1.8622 -5.5599 11 6 4.6907 -2.4989 -6.7733 12 6 5.4260 -1.4588 -7.6209 13 6 4.5097 -0.3926 -8.1639 14 6 4.6359 0.9138 -7.7301 15 6 3.7985 1.8926 -8.2318 16 6 2.8281 1.5631 -9.1593 17 6 2.6983 0.2556 -9.5893 18 6 3.5394 -0.7222 -9.0919 19 6 6.3552 -2.0733 -8.6810 20 6 7.4582 -2.0580 -7.6095 21 1 7.4899 -2.9627 -7.0025 22 9 8.7141 -1.6891 -8.1033 23 6 6.6914 -0.8999 -6.9494 24 6 2.0828 -2.6534 -2.6006 25 6 1.6004 -2.0375 -1.4566 26 1 -0.3933 0.4417 -0.7651 27 1 1.7923 -0.5139 0.8899 28 1 1.5616 2.4679 1.2085 29 1 3.5346 1.7703 -0.0322 30 1 2.9798 0.9933 -1.9790 31 1 4.3843 -0.9346 -5.3707 32 1 5.3804 -3.2971 -6.4987 33 1 3.8627 -2.9154 -7.3469 34 1 5.3915 1.1705 -7.0024 35 1 3.8997 2.9140 -7.8956 36 1 2.1710 2.3270 -9.5479 37 1 1.9398 -0.0019 -10.3136 38 1 3.4378 -1.7436 -9.4274 39 1 6.0612 -3.0763 -8.9906 40 1 6.5553 -1.4109 -9.5232 41 1 6.9834 0.0834 -7.3180 42 1 6.6689 -0.9553 -5.8610 43 1 1.8449 -3.6862 -2.8083 44 1 0.9807 -2.5790 -0.7573 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13458982_13287726.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:27:56 Heat of formation + Delta-G solvation = -22.166472 kcal Electronic energy + Delta-G solvation = -29441.878225 eV Core-core repulsion = 25240.940136 eV Total energy + Delta-G solvation = -4200.938089 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 343.137 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -48.53280 -42.00226 -41.45413 -40.00614 -38.82055 -37.98891 -35.42255 -33.81567 -33.02631 -32.09057 -31.90477 -29.18946 -27.51482 -27.09415 -25.19055 -25.01098 -23.70268 -23.26059 -22.57854 -21.76434 -20.26617 -19.09751 -18.69042 -18.40788 -17.81396 -17.49559 -16.84388 -16.71707 -16.64301 -16.45167 -16.24634 -16.05069 -16.02312 -15.59927 -15.50976 -15.16780 -14.88615 -14.65281 -14.44016 -14.36200 -14.27624 -14.16683 -13.67546 -13.61907 -13.58157 -13.41958 -12.67919 -12.58484 -12.50527 -12.26428 -12.19253 -11.85938 -11.43695 -11.38731 -11.33758 -11.11649 -10.73136 -10.67747 -10.35015 -10.09715 -9.85918 -9.68813 -5.21108 -0.60505 0.02177 0.36998 0.45750 1.06571 1.45163 1.61311 1.81839 1.91159 2.67315 2.77406 2.88793 3.03595 3.15076 3.21569 3.32429 3.39103 3.44008 3.54506 3.62399 3.71107 3.78040 3.89649 4.02261 4.04651 4.09427 4.11397 4.20383 4.26673 4.41190 4.49035 4.50875 4.53343 4.54842 4.60288 4.62752 4.72381 4.82369 4.86140 4.92389 5.02950 5.07885 5.16849 5.27991 5.32911 5.52844 5.58770 5.60323 6.03605 6.27665 6.34782 6.58668 7.09157 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.067 4.067 3 Si 0.687 3.313 4 C -0.150 4.150 5 C 0.103 3.897 6 N -0.452 5.452 7 C 0.081 3.919 8 C 0.573 3.427 9 O -0.529 6.529 10 N -0.706 5.706 11 C 0.144 3.856 12 C -0.055 4.055 13 C -0.068 4.068 14 C -0.115 4.115 15 C -0.115 4.115 16 C -0.120 4.120 17 C -0.117 4.117 18 C -0.110 4.110 19 C -0.139 4.139 20 C 0.065 3.935 21 H 0.112 0.888 22 F -0.204 7.204 23 C -0.154 4.154 24 C -0.107 4.107 25 C -0.053 4.053 26 H 0.381 0.619 27 H 0.121 0.879 28 H -0.249 1.249 29 H -0.252 1.252 30 H 0.164 0.836 31 H 0.413 0.587 32 H 0.077 0.923 33 H 0.082 0.918 34 H 0.124 0.876 35 H 0.123 0.877 36 H 0.122 0.878 37 H 0.122 0.878 38 H 0.121 0.879 39 H 0.088 0.912 40 H 0.103 0.897 41 H 0.104 0.896 42 H 0.085 0.915 43 H 0.153 0.847 44 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.692 3.471 -0.342 3.876 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.178 4.178 3 Si 0.588 3.412 4 C -0.152 4.152 5 C -0.057 4.057 6 N -0.163 5.163 7 C -0.057 4.057 8 C 0.358 3.642 9 O -0.404 6.404 10 N -0.357 5.357 11 C 0.020 3.980 12 C -0.055 4.055 13 C -0.068 4.068 14 C -0.133 4.133 15 C -0.133 4.133 16 C -0.138 4.138 17 C -0.135 4.135 18 C -0.128 4.128 19 C -0.177 4.177 20 C 0.029 3.971 21 H 0.129 0.871 22 F -0.184 7.184 23 C -0.192 4.192 24 C -0.128 4.128 25 C -0.079 4.079 26 H 0.229 0.771 27 H 0.138 0.862 28 H -0.173 1.173 29 H -0.177 1.177 30 H 0.180 0.820 31 H 0.250 0.750 32 H 0.095 0.905 33 H 0.100 0.900 34 H 0.142 0.858 35 H 0.141 0.859 36 H 0.140 0.860 37 H 0.140 0.860 38 H 0.139 0.861 39 H 0.107 0.893 40 H 0.122 0.878 41 H 0.123 0.877 42 H 0.104 0.896 43 H 0.170 0.830 44 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges -0.725 3.344 -0.191 3.427 hybrid contribution -0.338 -0.547 0.808 1.033 sum -1.063 2.797 0.617 3.055 Atomic orbital electron populations 1.86536 1.16582 1.81655 1.49354 1.25047 0.85607 1.10409 0.96758 0.94772 0.81179 0.77309 0.87928 1.21663 0.99149 0.96054 0.98369 1.22615 0.94122 0.99641 0.89273 1.67514 1.20217 1.09100 1.19460 1.21134 0.97964 0.90728 0.95901 1.17819 0.78499 0.85600 0.82316 1.90823 1.58513 1.16065 1.75014 1.45691 1.51148 1.16527 1.22378 1.21206 0.98376 0.93645 0.84763 1.20749 0.92876 0.95034 0.96881 1.19360 0.96462 0.93529 0.97472 1.21065 0.99676 0.92341 1.00169 1.21167 0.95555 0.99416 0.97186 1.21221 0.98399 0.96566 0.97597 1.21175 0.99166 0.93195 0.99917 1.20960 0.95180 0.99562 0.97066 1.23646 0.93735 1.03020 0.97305 1.23095 0.78240 0.99050 0.96716 0.87081 1.92829 1.43804 1.92915 1.88897 1.23791 0.94045 0.99718 1.01617 1.22224 0.95285 1.02076 0.93232 1.21555 0.96382 0.93634 0.96309 0.77119 0.86185 1.17313 1.17703 0.81956 0.75015 0.90504 0.89972 0.85815 0.85877 0.86027 0.85961 0.86099 0.89342 0.87816 0.87720 0.89606 0.82971 0.83432 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.84 12.78 -35.23 -0.45 0.39 16 2 C -0.07 0.14 2.83 36.01 0.10 0.24 16 3 Si 0.69 -1.95 29.82 -169.99 -5.07 -7.01 16 4 C -0.15 0.20 5.40 -104.36 -0.56 -0.36 16 5 C 0.10 -0.11 9.84 -17.56 -0.17 -0.28 16 6 N -0.45 -0.27 9.54 -9.80 -0.09 -0.36 16 7 C 0.08 0.12 6.75 -83.01 -0.56 -0.44 16 8 C 0.57 1.43 7.81 -12.18 -0.10 1.34 16 9 O -0.53 -2.79 16.32 5.36 0.09 -2.71 16 10 N -0.71 -0.12 5.17 -61.15 -0.32 -0.44 16 11 C 0.14 -0.12 4.85 -4.04 -0.02 -0.14 16 12 C -0.05 0.10 0.63 -154.85 -0.10 0.00 16 13 C -0.07 0.05 4.67 -104.62 -0.49 -0.44 16 14 C -0.11 0.09 9.05 -39.58 -0.36 -0.27 16 15 C -0.12 0.06 10.05 -39.58 -0.40 -0.34 16 16 C -0.12 0.03 10.05 -39.58 -0.40 -0.37 16 17 C -0.12 0.01 10.05 -39.58 -0.40 -0.39 16 18 C -0.11 0.02 9.33 -39.58 -0.37 -0.35 16 19 C -0.14 0.25 7.00 -25.91 -0.18 0.07 16 20 C 0.07 -0.07 5.32 -25.91 -0.14 -0.21 16 21 H 0.11 -0.26 7.61 -51.93 -0.40 -0.66 16 22 F -0.20 -0.45 17.41 2.25 0.04 -0.41 16 23 C -0.15 0.30 5.97 -25.92 -0.15 0.14 16 24 C -0.11 -0.06 9.63 -39.05 -0.38 -0.44 16 25 C -0.05 0.04 9.76 -39.31 -0.38 -0.34 16 26 H 0.38 -2.02 8.70 45.56 0.40 -1.62 16 27 H 0.12 -0.23 7.96 -51.93 -0.41 -0.64 16 28 H -0.25 -0.14 7.11 56.52 0.40 0.26 16 29 H -0.25 0.17 7.11 56.52 0.40 0.57 16 30 H 0.16 -0.56 4.89 -52.49 -0.26 -0.81 16 31 H 0.41 -0.28 7.40 -40.82 -0.30 -0.58 16 32 H 0.08 -0.08 7.31 -51.93 -0.38 -0.46 16 33 H 0.08 0.00 7.95 -51.93 -0.41 -0.42 16 34 H 0.12 -0.27 6.44 -52.49 -0.34 -0.60 16 35 H 0.12 -0.25 8.06 -52.49 -0.42 -0.68 16 36 H 0.12 -0.20 8.06 -52.49 -0.42 -0.62 16 37 H 0.12 -0.17 8.06 -52.49 -0.42 -0.59 16 38 H 0.12 -0.15 8.06 -52.49 -0.42 -0.57 16 39 H 0.09 -0.25 8.10 -51.93 -0.42 -0.67 16 40 H 0.10 -0.12 8.10 -51.93 -0.42 -0.54 16 41 H 0.10 -0.18 6.83 -51.93 -0.35 -0.54 16 42 H 0.09 -0.20 7.75 -51.93 -0.40 -0.61 16 43 H 0.15 0.05 7.64 -52.49 -0.40 -0.36 16 44 H 0.15 -0.30 8.06 -52.49 -0.42 -0.72 16 LS Contribution 371.22 15.07 5.59 5.59 Total: 0.00 -7.71 371.22 -10.67 -18.38 By element: Atomic # 1 Polarization: -5.45 SS G_CDS: -5.41 Total: -10.86 kcal Atomic # 6 Polarization: 2.48 SS G_CDS: -5.05 Total: -2.57 kcal Atomic # 7 Polarization: -0.39 SS G_CDS: -0.41 Total: -0.80 kcal Atomic # 8 Polarization: -1.95 SS G_CDS: -0.36 Total: -2.32 kcal Atomic # 9 Polarization: -0.45 SS G_CDS: 0.04 Total: -0.41 kcal Atomic # 14 Polarization: -1.95 SS G_CDS: -5.07 Total: -7.01 kcal Total LS contribution 5.59 Total: 5.59 kcal Total: -7.71 -10.67 -18.38 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13458982_13287726.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -3.790 kcal (2) G-P(sol) polarization free energy of solvation -7.706 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -11.496 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.670 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.377 kcal (6) G-S(sol) free energy of system = (1) + (5) -22.166 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds