Wall clock time and date at job start Sat Mar 6 2021 21:27:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86303 * 109.47441 * 2 1 4 4 C 1.50701 * 109.47283 * 239.99926 * 2 1 3 5 5 C 1.38561 * 120.32364 * 119.71816 * 4 2 1 6 6 N 1.31526 * 120.89946 * 179.72894 * 5 4 2 7 7 C 1.32719 * 121.64461 * 0.58621 * 6 5 4 8 8 C 1.48167 * 119.72433 * 179.70231 * 7 6 5 9 9 O 1.21506 * 120.00437 * 179.97438 * 8 7 6 10 10 N 1.34783 * 119.99820 * 359.97438 * 8 7 6 11 11 C 1.46497 * 119.99758 * 179.97438 * 10 8 7 12 12 C 1.53003 * 109.46946 * 175.10879 * 11 10 8 13 13 C 1.50700 * 112.85069 * 294.00670 * 12 11 10 14 14 C 1.38234 * 119.99943 * 113.50930 * 13 12 11 15 15 C 1.38237 * 119.99764 * 179.76529 * 14 13 12 16 16 C 1.38232 * 120.00173 * 0.51091 * 15 14 13 17 17 C 1.38244 * 120.00052 * 359.74555 * 16 15 14 18 18 C 1.38235 * 119.99836 * 359.97438 * 17 16 15 19 19 C 1.53781 * 113.61519 * 162.70234 * 12 11 10 20 20 C 1.53789 * 87.08214 * 270.88473 * 19 12 11 21 21 H 1.08998 * 113.61383 * 89.10951 * 20 19 12 22 22 F 1.39899 * 113.61439 * 220.02121 * 20 19 12 23 23 C 1.53778 * 113.61634 * 65.20518 * 12 11 10 24 24 C 1.39306 * 120.55272 * 359.68270 * 7 6 5 25 25 C 1.38590 * 119.06019 * 0.02562 * 24 7 6 26 26 H 0.96703 * 113.99893 * 60.00076 * 1 2 3 27 27 H 1.08999 * 109.47404 * 120.00369 * 2 1 3 28 28 H 1.48495 * 109.99919 * 59.99999 * 3 2 1 29 29 H 1.48499 * 110.00273 * 181.32075 * 3 2 1 30 30 H 1.07996 * 119.55177 * 0.02562 * 5 4 2 31 31 H 0.97001 * 119.99886 * 359.97438 * 10 8 7 32 32 H 1.09001 * 109.47208 * 295.10432 * 11 10 8 33 33 H 1.08996 * 109.47412 * 55.11338 * 11 10 8 34 34 H 1.07997 * 120.00204 * 0.02562 * 14 13 12 35 35 H 1.08000 * 119.99567 * 180.23454 * 15 14 13 36 36 H 1.07994 * 120.00135 * 179.72180 * 16 15 14 37 37 H 1.07997 * 120.00269 * 179.97438 * 17 16 15 38 38 H 1.07994 * 120.00249 * 179.97438 * 18 17 16 39 39 H 1.09001 * 113.61397 * 25.43002 * 19 12 11 40 40 H 1.09001 * 113.61969 * 156.33422 * 19 12 11 41 41 H 1.08997 * 113.61865 * 203.66503 * 23 12 11 42 42 H 1.09001 * 113.61439 * 334.56434 * 23 12 11 43 43 H 1.08000 * 120.47050 * 180.02562 * 24 7 6 44 44 H 1.07996 * 120.75527 * 179.97438 * 25 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2304 5 6 2.7235 -0.0418 -2.1498 6 7 3.1725 -0.6523 -3.2249 7 6 2.8787 -1.9214 -3.4788 8 6 3.4022 -2.5652 -4.7063 9 8 3.1368 -3.7270 -4.9435 10 7 4.1727 -1.8622 -5.5599 11 6 4.6907 -2.4989 -6.7733 12 6 5.4260 -1.4588 -7.6209 13 6 4.5097 -0.3926 -8.1639 14 6 4.6359 0.9138 -7.7301 15 6 3.7985 1.8926 -8.2318 16 6 2.8281 1.5631 -9.1593 17 6 2.6983 0.2556 -9.5893 18 6 3.5394 -0.7222 -9.0919 19 6 6.3552 -2.0733 -8.6810 20 6 7.4582 -2.0580 -7.6095 21 1 7.4899 -2.9627 -7.0025 22 9 8.7141 -1.6891 -8.1033 23 6 6.6914 -0.8999 -6.9494 24 6 2.0828 -2.6534 -2.6006 25 6 1.6004 -2.0375 -1.4566 26 1 -0.3933 0.4417 -0.7651 27 1 1.7923 -0.5139 0.8899 28 1 1.5616 2.4679 1.2085 29 1 3.5346 1.7703 -0.0322 30 1 2.9798 0.9933 -1.9790 31 1 4.3843 -0.9346 -5.3707 32 1 5.3804 -3.2971 -6.4987 33 1 3.8627 -2.9154 -7.3469 34 1 5.3915 1.1705 -7.0024 35 1 3.8997 2.9140 -7.8956 36 1 2.1710 2.3270 -9.5479 37 1 1.9398 -0.0019 -10.3136 38 1 3.4378 -1.7436 -9.4274 39 1 6.0612 -3.0763 -8.9906 40 1 6.5553 -1.4109 -9.5232 41 1 6.9834 0.0834 -7.3180 42 1 6.6689 -0.9553 -5.8610 43 1 1.8449 -3.6862 -2.8083 44 1 0.9807 -2.5790 -0.7573 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13458982_13287726.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:27:55 Heat of formation + Delta-G solvation = -18.844773 kcal Electronic energy + Delta-G solvation = -29441.734186 eV Core-core repulsion = 25240.940136 eV Total energy + Delta-G solvation = -4200.794050 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 343.137 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -48.58209 -42.00546 -41.38352 -40.08153 -38.74999 -37.86740 -35.50679 -33.76187 -33.00170 -32.01223 -31.82217 -29.17107 -27.42705 -26.98744 -25.12385 -24.95654 -23.65453 -23.18356 -22.50142 -21.82673 -20.22604 -19.06876 -18.60374 -18.35267 -17.76461 -17.42033 -16.84137 -16.68854 -16.58517 -16.42689 -16.22966 -16.02379 -15.98118 -15.54769 -15.47926 -15.15342 -14.85012 -14.62275 -14.37708 -14.27260 -14.24229 -14.18392 -13.64052 -13.53963 -13.50998 -13.36276 -12.55247 -12.51942 -12.41662 -12.18202 -12.17304 -11.77920 -11.53085 -11.33630 -11.24495 -11.07285 -10.69833 -10.60356 -10.36222 -10.10530 -9.79576 -9.62110 -5.00556 -0.60792 0.07222 0.43552 0.52116 1.24614 1.52201 1.63384 1.87893 1.97492 2.65868 2.83825 2.91806 3.14079 3.25182 3.42237 3.42918 3.50664 3.54219 3.62144 3.69781 3.79300 3.86842 3.94935 4.11966 4.13391 4.14847 4.21416 4.31470 4.41008 4.47014 4.56500 4.58986 4.64554 4.67524 4.69839 4.73204 4.85084 4.88908 4.95407 4.98159 5.11822 5.16957 5.23966 5.27325 5.37700 5.60304 5.66263 5.66732 6.12220 6.23473 6.58591 6.70978 6.99566 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.551 6.551 2 C -0.069 4.069 3 Si 0.772 3.228 4 C -0.142 4.142 5 C 0.101 3.899 6 N -0.458 5.458 7 C 0.063 3.937 8 C 0.569 3.431 9 O -0.565 6.565 10 N -0.694 5.694 11 C 0.143 3.857 12 C -0.043 4.043 13 C -0.072 4.072 14 C -0.121 4.121 15 C -0.124 4.124 16 C -0.132 4.132 17 C -0.130 4.130 18 C -0.123 4.123 19 C -0.136 4.136 20 C 0.056 3.944 21 H 0.125 0.875 22 F -0.223 7.223 23 C -0.149 4.149 24 C -0.115 4.115 25 C -0.053 4.053 26 H 0.397 0.603 27 H 0.119 0.881 28 H -0.296 1.296 29 H -0.277 1.277 30 H 0.186 0.814 31 H 0.418 0.582 32 H 0.082 0.918 33 H 0.074 0.926 34 H 0.137 0.863 35 H 0.138 0.862 36 H 0.132 0.868 37 H 0.130 0.870 38 H 0.126 0.874 39 H 0.098 0.902 40 H 0.097 0.903 41 H 0.105 0.895 42 H 0.092 0.908 43 H 0.149 0.851 44 H 0.160 0.840 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.766 4.306 0.071 4.655 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.359 6.359 2 C -0.180 4.180 3 Si 0.677 3.323 4 C -0.144 4.144 5 C -0.059 4.059 6 N -0.169 5.169 7 C -0.074 4.074 8 C 0.355 3.645 9 O -0.444 6.444 10 N -0.345 5.345 11 C 0.020 3.980 12 C -0.043 4.043 13 C -0.072 4.072 14 C -0.139 4.139 15 C -0.142 4.142 16 C -0.150 4.150 17 C -0.148 4.148 18 C -0.141 4.141 19 C -0.174 4.174 20 C 0.021 3.979 21 H 0.142 0.858 22 F -0.204 7.204 23 C -0.186 4.186 24 C -0.136 4.136 25 C -0.079 4.079 26 H 0.248 0.752 27 H 0.137 0.863 28 H -0.224 1.224 29 H -0.203 1.203 30 H 0.203 0.797 31 H 0.256 0.744 32 H 0.100 0.900 33 H 0.092 0.908 34 H 0.155 0.845 35 H 0.155 0.845 36 H 0.150 0.850 37 H 0.148 0.852 38 H 0.144 0.856 39 H 0.117 0.883 40 H 0.116 0.884 41 H 0.123 0.877 42 H 0.111 0.889 43 H 0.166 0.834 44 H 0.177 0.823 Dipole moment (debyes) X Y Z Total from point charges -0.800 4.189 0.183 4.268 hybrid contribution -0.349 -0.756 0.739 1.113 sum -1.149 3.432 0.922 3.735 Atomic orbital electron populations 1.86507 1.16673 1.82097 1.50585 1.25160 0.85626 1.10931 0.96238 0.93780 0.78235 0.74681 0.85582 1.21768 0.98486 0.95771 0.98398 1.23009 0.93634 1.00548 0.88693 1.67506 1.20554 1.08671 1.20191 1.21068 0.98989 0.91370 0.95984 1.18040 0.78406 0.85283 0.82797 1.90794 1.60067 1.17534 1.75971 1.45661 1.50181 1.16579 1.22112 1.21246 0.98259 0.94038 0.84428 1.20577 0.92563 0.94493 0.96682 1.19468 0.96465 0.93911 0.97390 1.21281 0.99943 0.92276 1.00377 1.21423 0.95418 1.00265 0.97078 1.21452 0.98842 0.96834 0.97852 1.21385 0.99585 0.93502 1.00353 1.21137 0.95528 0.99948 0.97462 1.23618 0.93284 1.03501 0.96959 1.23355 0.77387 0.99940 0.97253 0.85774 1.92787 1.45213 1.93157 1.89237 1.23766 0.93402 0.99453 1.01985 1.22274 0.95533 1.02076 0.93726 1.21716 0.96240 0.94014 0.95945 0.75244 0.86335 1.22361 1.20331 0.79722 0.74410 0.89994 0.90760 0.84509 0.84459 0.84960 0.85191 0.85609 0.88309 0.88416 0.87669 0.88894 0.83353 0.82254 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 2.33 12.78 -148.98 -1.90 0.43 16 2 C -0.07 0.36 2.83 71.24 0.20 0.57 16 3 Si 0.77 -5.03 29.82 68.60 2.05 -2.98 16 4 C -0.14 0.51 5.40 -19.69 -0.11 0.40 16 5 C 0.10 -0.32 9.84 84.82 0.83 0.52 16 6 N -0.46 -0.40 9.54 -184.91 -1.76 -2.17 16 7 C 0.06 0.23 6.75 41.91 0.28 0.51 16 8 C 0.57 3.40 7.81 86.88 0.68 4.08 16 9 O -0.56 -6.85 16.32 -3.73 -0.06 -6.91 16 10 N -0.69 -0.53 5.17 -465.67 -2.41 -2.94 16 11 C 0.14 -0.18 4.85 86.38 0.42 0.24 16 12 C -0.04 0.15 0.63 -52.40 -0.03 0.12 16 13 C -0.07 0.09 4.67 -19.86 -0.09 0.00 16 14 C -0.12 0.22 9.05 22.27 0.20 0.42 16 15 C -0.12 0.16 10.05 22.27 0.22 0.39 16 16 C -0.13 0.05 10.05 22.27 0.22 0.27 16 17 C -0.13 -0.04 10.05 22.27 0.22 0.18 16 18 C -0.12 -0.02 9.33 22.27 0.21 0.19 16 19 C -0.14 0.48 7.00 31.12 0.22 0.70 16 20 C 0.06 -0.12 5.32 31.12 0.17 0.04 16 21 H 0.12 -0.63 7.61 -2.39 -0.02 -0.65 16 22 F -0.22 -1.04 17.41 44.97 0.78 -0.26 16 23 C -0.15 0.62 5.97 31.12 0.19 0.80 16 24 C -0.12 -0.21 9.63 22.61 0.22 0.01 16 25 C -0.05 0.10 9.76 22.45 0.22 0.32 16 26 H 0.40 -4.75 8.70 -74.05 -0.64 -5.39 16 27 H 0.12 -0.56 7.96 -2.39 -0.02 -0.58 16 28 H -0.30 -0.47 7.11 99.48 0.71 0.24 16 29 H -0.28 0.64 7.11 99.48 0.71 1.34 16 30 H 0.19 -1.58 4.89 -2.91 -0.01 -1.59 16 31 H 0.42 -0.58 7.40 -92.71 -0.69 -1.27 16 32 H 0.08 -0.16 7.31 -2.39 -0.02 -0.18 16 33 H 0.07 0.06 7.95 -2.39 -0.02 0.04 16 34 H 0.14 -0.69 6.44 -2.91 -0.02 -0.71 16 35 H 0.14 -0.67 8.06 -2.91 -0.02 -0.69 16 36 H 0.13 -0.45 8.06 -2.91 -0.02 -0.47 16 37 H 0.13 -0.29 8.06 -2.91 -0.02 -0.31 16 38 H 0.13 -0.21 8.06 -2.91 -0.02 -0.24 16 39 H 0.10 -0.56 8.10 -2.39 -0.02 -0.58 16 40 H 0.10 -0.19 8.10 -2.39 -0.02 -0.21 16 41 H 0.10 -0.41 6.83 -2.39 -0.02 -0.43 16 42 H 0.09 -0.50 7.75 -2.39 -0.02 -0.52 16 43 H 0.15 0.30 7.64 -2.91 -0.02 0.28 16 44 H 0.16 -0.73 8.06 -2.91 -0.02 -0.75 16 Total: 0.00 -18.47 371.22 0.73 -17.74 By element: Atomic # 1 Polarization: -12.42 SS G_CDS: -0.24 Total: -12.66 kcal Atomic # 6 Polarization: 5.47 SS G_CDS: 4.27 Total: 9.75 kcal Atomic # 7 Polarization: -0.93 SS G_CDS: -4.17 Total: -5.10 kcal Atomic # 8 Polarization: -4.52 SS G_CDS: -1.96 Total: -6.48 kcal Atomic # 9 Polarization: -1.04 SS G_CDS: 0.78 Total: -0.26 kcal Atomic # 14 Polarization: -5.03 SS G_CDS: 2.05 Total: -2.98 kcal Total: -18.47 0.73 -17.74 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13458982_13287726.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -1.106 kcal (2) G-P(sol) polarization free energy of solvation -18.467 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -19.573 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.728 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.739 kcal (6) G-S(sol) free energy of system = (1) + (5) -18.845 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds