Wall clock time and date at job start Sat Mar 6 2021 21:27:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46492 * 1 3 3 C 1.34662 * 124.85396 * 2 1 4 4 C 1.36770 * 108.39744 * 180.13779 * 3 2 1 5 5 C 1.47263 * 126.94230 * 179.87577 * 4 3 2 6 6 O 1.21627 * 119.99697 * 179.68322 * 5 4 3 7 7 N 1.34770 * 119.99892 * 359.67829 * 5 4 3 8 8 C 1.46505 * 120.00091 * 180.02562 * 7 5 4 9 9 C 1.53001 * 109.47219 * 184.96404 * 8 7 5 10 10 C 1.50693 * 112.85134 * 59.66044 * 9 8 7 11 11 C 1.38234 * 120.00163 * 257.13055 * 10 9 8 12 12 C 1.38234 * 120.00143 * 180.02562 * 11 10 9 13 13 C 1.38243 * 119.99669 * 0.02562 * 12 11 10 14 14 C 1.38227 * 120.00185 * 0.25368 * 13 12 11 15 15 C 1.38236 * 119.99789 * 77.16264 * 10 9 8 16 16 C 1.53789 * 113.68635 * 288.39413 * 9 8 7 17 17 C 1.53782 * 87.07979 * 270.87662 * 16 9 8 18 18 H 1.08998 * 113.61768 * 89.11861 * 17 16 9 19 19 F 1.39906 * 113.60888 * 220.01874 * 17 16 9 20 20 C 1.53775 * 113.61165 * 190.86430 * 9 8 7 21 21 C 1.46688 * 106.11204 * 359.60685 * 4 3 2 22 22 C 1.34476 * 106.33941 * 0.24386 * 21 4 3 23 23 C 1.50697 * 125.57830 * 180.02562 * 22 21 4 24 24 O 1.42900 * 109.47415 * 209.97399 * 23 22 21 25 25 Si 1.86302 * 109.47025 * 329.97494 * 23 22 21 26 26 H 1.09004 * 109.47198 * 270.31306 * 1 2 3 27 27 H 1.09007 * 109.47285 * 30.30987 * 1 2 3 28 28 H 1.09000 * 109.47627 * 150.31125 * 1 2 3 29 29 H 1.07996 * 125.80331 * 0.02562 * 3 2 1 30 30 H 0.97002 * 120.00044 * 0.02562 * 7 5 4 31 31 H 1.09000 * 109.47251 * 64.95764 * 8 7 5 32 32 H 1.09000 * 109.46527 * 304.96112 * 8 7 5 33 33 H 1.07994 * 120.00182 * 0.02562 * 11 10 9 34 34 H 1.07993 * 120.00592 * 179.97438 * 12 11 10 35 35 H 1.08007 * 119.99335 * 179.97438 * 13 12 11 36 36 H 1.08000 * 120.00161 * 179.72346 * 14 13 12 37 37 H 1.08001 * 119.99932 * 359.97438 * 15 10 9 38 38 H 1.09000 * 113.61537 * 25.42330 * 16 9 8 39 39 H 1.08994 * 113.61188 * 156.32675 * 16 9 8 40 40 H 1.09005 * 113.61451 * 203.74157 * 20 9 8 41 41 H 1.08998 * 113.61680 * 334.64681 * 20 9 8 42 42 H 1.08013 * 126.82697 * 180.21971 * 21 4 3 43 43 H 1.09001 * 109.47457 * 89.97343 * 23 22 21 44 44 H 0.96698 * 113.99732 * 59.99597 * 24 23 22 45 45 H 1.48493 * 110.00371 * 180.02562 * 25 23 22 46 46 H 1.48504 * 109.99766 * 301.32125 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.2345 1.1051 0.0000 4 6 3.5462 0.7176 -0.0031 5 6 4.7284 1.5956 -0.0068 6 8 5.8446 1.1126 -0.0035 7 7 4.5734 2.9344 -0.0139 8 6 5.7495 3.8080 -0.0181 9 6 5.3020 5.2664 0.0989 10 6 4.5225 5.5400 1.3592 11 6 3.1465 5.6612 1.3082 12 6 2.4315 5.9128 2.4642 13 6 3.0927 6.0436 3.6712 14 6 4.4692 5.9281 3.7212 15 6 5.1837 5.6705 2.5662 16 6 4.6285 5.8098 -1.1724 17 6 6.0324 6.2229 -1.6449 18 1 6.5505 5.4455 -2.2063 19 9 6.0654 7.4682 -2.2816 20 6 6.4296 6.2793 -0.1603 21 6 3.5374 -0.7492 0.0046 22 6 2.2447 -1.1198 0.0061 23 6 1.7396 -2.5396 0.0139 24 8 0.4807 -2.6011 -0.6595 25 14 2.9647 -3.6393 -0.8583 26 1 -0.3634 0.0056 1.0277 27 1 -0.3634 0.8872 -0.5187 28 1 -0.3634 -0.8927 -0.5090 29 1 1.8768 2.1241 0.0004 30 1 3.6832 3.3196 -0.0162 31 1 6.3009 3.6705 -0.9483 32 1 6.3920 3.5562 0.8257 33 1 2.6300 5.5594 0.3653 34 1 1.3565 6.0079 2.4244 35 1 2.5340 6.2406 4.5743 36 1 4.9862 6.0348 4.6634 37 1 6.2588 5.5758 2.6059 38 1 4.1704 5.0362 -1.7886 39 1 3.9640 6.6538 -0.9876 40 1 6.2576 7.2518 0.3010 41 1 7.4257 5.8848 0.0403 42 1 4.3981 -1.4018 0.0079 43 1 1.6178 -2.8763 1.0434 44 1 0.5141 -2.3151 -1.5826 45 1 2.4780 -5.0422 -0.8580 46 1 3.1636 -3.1715 -2.2536 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13458982_13287730.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:27:59 Heat of formation + Delta-G solvation = -9.383559 kcal Electronic energy + Delta-G solvation = -30284.082723 eV Core-core repulsion = 26056.387464 eV Total energy + Delta-G solvation = -4227.695259 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.153 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -48.52369 -42.50089 -41.58732 -39.82707 -38.78816 -38.02086 -35.13876 -33.82118 -32.13203 -31.95162 -31.54442 -28.85849 -27.47899 -27.18005 -26.23578 -25.03362 -23.46367 -23.19983 -22.60356 -21.06027 -20.60600 -19.99714 -18.99828 -18.37242 -17.63558 -17.45357 -17.00532 -16.87253 -16.69098 -16.57333 -16.11522 -15.97903 -15.73256 -15.58731 -15.50526 -15.43888 -14.99848 -14.81087 -14.41843 -14.31791 -14.29721 -14.09900 -13.71050 -13.62691 -13.57639 -13.38596 -13.33331 -13.09340 -12.58780 -12.46438 -12.33534 -12.25530 -11.94349 -11.90624 -11.40623 -11.35471 -10.97317 -10.78624 -10.02323 -9.90251 -9.72286 -9.56471 -9.22989 -4.94269 0.33823 0.40885 0.75666 1.02371 1.42776 1.63729 1.77869 2.01953 2.23339 2.70216 2.75288 3.01319 3.04554 3.16058 3.34589 3.44739 3.52544 3.56114 3.74563 3.76507 3.80814 3.98837 4.00809 4.10030 4.14386 4.17361 4.22551 4.37869 4.43981 4.45937 4.49961 4.53435 4.54700 4.58819 4.60168 4.68125 4.73729 4.87366 4.92489 4.98110 5.00842 5.03829 5.17754 5.45524 5.48704 5.55332 5.56813 5.66887 5.93632 5.99585 6.12193 6.15662 6.63993 7.45843 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.050 3.950 2 N -0.425 5.425 3 C 0.050 3.950 4 C -0.226 4.226 5 C 0.592 3.408 6 O -0.541 6.541 7 N -0.728 5.728 8 C 0.149 3.851 9 C -0.055 4.055 10 C -0.064 4.064 11 C -0.120 4.120 12 C -0.116 4.116 13 C -0.121 4.121 14 C -0.114 4.114 15 C -0.108 4.108 16 C -0.152 4.152 17 C 0.065 3.935 18 H 0.113 0.887 19 F -0.205 7.205 20 C -0.141 4.141 21 C -0.129 4.129 22 C -0.022 4.022 23 C -0.049 4.049 24 O -0.532 6.532 25 Si 0.712 3.288 26 H 0.075 0.925 27 H 0.081 0.919 28 H 0.111 0.889 29 H 0.168 0.832 30 H 0.397 0.603 31 H 0.074 0.926 32 H 0.079 0.921 33 H 0.121 0.879 34 H 0.122 0.878 35 H 0.122 0.878 36 H 0.123 0.877 37 H 0.123 0.877 38 H 0.084 0.916 39 H 0.102 0.898 40 H 0.102 0.898 41 H 0.088 0.912 42 H 0.158 0.842 43 H 0.122 0.878 44 H 0.377 0.623 45 H -0.253 1.253 46 H -0.256 1.256 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.705 0.896 1.155 3.983 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.091 4.091 2 N -0.100 5.100 3 C -0.086 4.086 4 C -0.237 4.237 5 C 0.381 3.619 6 O -0.418 6.418 7 N -0.380 5.380 8 C 0.025 3.975 9 C -0.056 4.056 10 C -0.065 4.065 11 C -0.138 4.138 12 C -0.134 4.134 13 C -0.139 4.139 14 C -0.132 4.132 15 C -0.126 4.126 16 C -0.190 4.190 17 C 0.029 3.971 18 H 0.130 0.870 19 F -0.185 7.185 20 C -0.179 4.179 21 C -0.153 4.153 22 C -0.131 4.131 23 C -0.158 4.158 24 O -0.339 6.339 25 Si 0.610 3.390 26 H 0.093 0.907 27 H 0.100 0.900 28 H 0.129 0.871 29 H 0.185 0.815 30 H 0.231 0.769 31 H 0.092 0.908 32 H 0.097 0.903 33 H 0.139 0.861 34 H 0.140 0.860 35 H 0.140 0.860 36 H 0.141 0.859 37 H 0.141 0.859 38 H 0.103 0.897 39 H 0.120 0.880 40 H 0.121 0.879 41 H 0.107 0.893 42 H 0.176 0.824 43 H 0.140 0.860 44 H 0.226 0.774 45 H -0.178 1.178 46 H -0.180 1.180 Dipole moment (debyes) X Y Z Total from point charges -3.318 -0.223 1.040 3.484 hybrid contribution -1.481 1.076 -0.471 1.890 sum -4.799 0.853 0.569 4.907 Atomic orbital electron populations 1.22549 0.76406 1.05835 1.04318 1.43476 1.06962 1.04945 1.54599 1.21906 0.90192 0.91722 1.04780 1.20280 0.91411 0.93966 1.18008 1.17349 0.88118 0.81044 0.75389 1.90792 1.25748 1.75132 1.50145 1.45694 1.09574 1.05742 1.76986 1.21078 0.87958 0.85455 1.03006 1.20788 0.97155 0.94676 0.92958 1.19387 0.93429 1.00100 0.93538 1.20986 0.93341 1.01028 0.98424 1.21149 0.99954 0.99686 0.92649 1.21217 0.94684 0.99922 0.98046 1.21195 0.94360 0.99292 0.98390 1.20990 1.00105 0.99580 0.91962 1.23768 0.97034 1.02296 0.95899 1.23096 0.98533 0.82835 0.92624 0.86970 1.92828 1.97298 1.44402 1.83982 1.23655 0.99033 1.00210 0.95018 1.21623 0.94819 0.93028 1.05846 1.20749 0.90701 0.88991 1.12661 1.24785 0.92657 0.94832 1.03545 1.86553 1.29797 1.88750 1.28814 0.94185 0.85223 0.77396 0.82148 0.90669 0.90042 0.87103 0.81499 0.76888 0.90782 0.90260 0.86145 0.86005 0.86036 0.85884 0.85948 0.89696 0.88004 0.87912 0.89304 0.82446 0.86002 0.77411 1.17787 1.18043 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.15 10.71 59.84 0.64 0.49 16 2 N -0.43 0.27 3.09 -119.90 -0.37 -0.10 16 3 C 0.05 -0.03 10.83 -16.84 -0.18 -0.21 16 4 C -0.23 -0.43 6.29 -103.35 -0.65 -1.08 16 5 C 0.59 1.85 7.81 -12.60 -0.10 1.75 16 6 O -0.54 -3.73 16.97 5.25 0.09 -3.64 16 7 N -0.73 0.08 5.30 -61.43 -0.33 -0.24 16 8 C 0.15 -0.09 4.93 -4.04 -0.02 -0.11 16 9 C -0.06 0.11 0.63 -154.85 -0.10 0.01 16 10 C -0.06 0.06 4.42 -104.63 -0.46 -0.40 16 11 C -0.12 0.17 8.43 -39.58 -0.33 -0.16 16 12 C -0.12 0.11 10.05 -39.58 -0.40 -0.28 16 13 C -0.12 0.05 10.05 -39.58 -0.40 -0.35 16 14 C -0.11 0.02 10.05 -39.58 -0.40 -0.38 16 15 C -0.11 0.03 9.39 -39.58 -0.37 -0.34 16 16 C -0.15 0.33 6.08 -25.91 -0.16 0.18 16 17 C 0.07 -0.07 5.32 -25.92 -0.14 -0.21 16 18 H 0.11 -0.26 7.60 -51.93 -0.39 -0.66 16 19 F -0.20 -0.45 17.41 2.25 0.04 -0.41 16 20 C -0.14 0.25 6.76 -25.92 -0.18 0.08 16 21 C -0.13 -0.21 9.49 -37.50 -0.36 -0.56 16 22 C -0.02 -0.01 6.14 -81.87 -0.50 -0.51 16 23 C -0.05 0.05 2.98 36.00 0.11 0.16 16 24 O -0.53 0.54 9.95 -35.23 -0.35 0.19 16 25 Si 0.71 -0.78 31.12 -169.99 -5.29 -6.07 16 26 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 27 H 0.08 -0.39 8.13 -51.92 -0.42 -0.81 16 28 H 0.11 -0.35 4.93 -51.93 -0.26 -0.61 16 29 H 0.17 -0.62 7.45 -52.49 -0.39 -1.02 16 30 H 0.40 -0.85 6.64 -40.82 -0.27 -1.12 16 31 H 0.07 -0.04 7.30 -51.93 -0.38 -0.42 16 32 H 0.08 0.05 8.14 -51.93 -0.42 -0.37 16 33 H 0.12 -0.39 7.03 -52.49 -0.37 -0.76 16 34 H 0.12 -0.31 8.06 -52.49 -0.42 -0.74 16 35 H 0.12 -0.21 8.06 -52.48 -0.42 -0.63 16 36 H 0.12 -0.18 8.06 -52.49 -0.42 -0.60 16 37 H 0.12 -0.15 8.03 -52.49 -0.42 -0.57 16 38 H 0.08 -0.25 8.10 -51.93 -0.42 -0.67 16 39 H 0.10 -0.19 7.44 -51.93 -0.39 -0.58 16 40 H 0.10 -0.12 8.09 -51.93 -0.42 -0.54 16 41 H 0.09 -0.23 8.10 -51.93 -0.42 -0.65 16 42 H 0.16 0.10 6.89 -52.48 -0.36 -0.26 16 43 H 0.12 -0.20 7.96 -51.93 -0.41 -0.61 16 44 H 0.38 -1.30 8.38 45.56 0.38 -0.92 16 45 H -0.25 -0.41 7.11 56.52 0.40 -0.01 16 46 H -0.26 -0.40 7.11 56.52 0.40 0.00 16 LS Contribution 380.93 15.07 5.74 5.74 Total: 0.00 -8.95 380.93 -10.71 -19.67 By element: Atomic # 1 Polarization: -6.95 SS G_CDS: -6.26 Total: -13.21 kcal Atomic # 6 Polarization: 2.06 SS G_CDS: -3.99 Total: -1.93 kcal Atomic # 7 Polarization: 0.36 SS G_CDS: -0.70 Total: -0.34 kcal Atomic # 8 Polarization: -3.19 SS G_CDS: -0.26 Total: -3.45 kcal Atomic # 9 Polarization: -0.45 SS G_CDS: 0.04 Total: -0.41 kcal Atomic # 14 Polarization: -0.78 SS G_CDS: -5.29 Total: -6.07 kcal Total LS contribution 5.74 Total: 5.74 kcal Total: -8.95 -10.71 -19.67 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13458982_13287730.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 10.285 kcal (2) G-P(sol) polarization free energy of solvation -8.955 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 1.331 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.714 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.669 kcal (6) G-S(sol) free energy of system = (1) + (5) -9.384 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds