Wall clock time and date at job start Sat Mar 6 2021 21:27:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46492 * 1 3 3 C 1.34662 * 124.85396 * 2 1 4 4 C 1.36770 * 108.39744 * 180.13779 * 3 2 1 5 5 C 1.47263 * 126.94230 * 179.87577 * 4 3 2 6 6 O 1.21627 * 119.99697 * 179.68322 * 5 4 3 7 7 N 1.34770 * 119.99892 * 359.67829 * 5 4 3 8 8 C 1.46505 * 120.00091 * 180.02562 * 7 5 4 9 9 C 1.53001 * 109.47219 * 184.96404 * 8 7 5 10 10 C 1.50693 * 112.85134 * 59.66044 * 9 8 7 11 11 C 1.38234 * 120.00163 * 257.13055 * 10 9 8 12 12 C 1.38234 * 120.00143 * 180.02562 * 11 10 9 13 13 C 1.38243 * 119.99669 * 0.02562 * 12 11 10 14 14 C 1.38227 * 120.00185 * 0.25368 * 13 12 11 15 15 C 1.38236 * 119.99789 * 77.16264 * 10 9 8 16 16 C 1.53789 * 113.68635 * 288.39413 * 9 8 7 17 17 C 1.53782 * 87.07979 * 270.87662 * 16 9 8 18 18 H 1.08998 * 113.61768 * 89.11861 * 17 16 9 19 19 F 1.39906 * 113.60888 * 220.01874 * 17 16 9 20 20 C 1.53775 * 113.61165 * 190.86430 * 9 8 7 21 21 C 1.46688 * 106.11204 * 359.60685 * 4 3 2 22 22 C 1.34476 * 106.33941 * 0.24386 * 21 4 3 23 23 C 1.50697 * 125.57830 * 180.02562 * 22 21 4 24 24 O 1.42900 * 109.47415 * 209.97399 * 23 22 21 25 25 Si 1.86302 * 109.47025 * 329.97494 * 23 22 21 26 26 H 1.09004 * 109.47198 * 270.31306 * 1 2 3 27 27 H 1.09007 * 109.47285 * 30.30987 * 1 2 3 28 28 H 1.09000 * 109.47627 * 150.31125 * 1 2 3 29 29 H 1.07996 * 125.80331 * 0.02562 * 3 2 1 30 30 H 0.97002 * 120.00044 * 0.02562 * 7 5 4 31 31 H 1.09000 * 109.47251 * 64.95764 * 8 7 5 32 32 H 1.09000 * 109.46527 * 304.96112 * 8 7 5 33 33 H 1.07994 * 120.00182 * 0.02562 * 11 10 9 34 34 H 1.07993 * 120.00592 * 179.97438 * 12 11 10 35 35 H 1.08007 * 119.99335 * 179.97438 * 13 12 11 36 36 H 1.08000 * 120.00161 * 179.72346 * 14 13 12 37 37 H 1.08001 * 119.99932 * 359.97438 * 15 10 9 38 38 H 1.09000 * 113.61537 * 25.42330 * 16 9 8 39 39 H 1.08994 * 113.61188 * 156.32675 * 16 9 8 40 40 H 1.09005 * 113.61451 * 203.74157 * 20 9 8 41 41 H 1.08998 * 113.61680 * 334.64681 * 20 9 8 42 42 H 1.08013 * 126.82697 * 180.21971 * 21 4 3 43 43 H 1.09001 * 109.47457 * 89.97343 * 23 22 21 44 44 H 0.96698 * 113.99732 * 59.99597 * 24 23 22 45 45 H 1.48493 * 110.00371 * 180.02562 * 25 23 22 46 46 H 1.48504 * 109.99766 * 301.32125 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.2345 1.1051 0.0000 4 6 3.5462 0.7176 -0.0031 5 6 4.7284 1.5956 -0.0068 6 8 5.8446 1.1126 -0.0035 7 7 4.5734 2.9344 -0.0139 8 6 5.7495 3.8080 -0.0181 9 6 5.3020 5.2664 0.0989 10 6 4.5225 5.5400 1.3592 11 6 3.1465 5.6612 1.3082 12 6 2.4315 5.9128 2.4642 13 6 3.0927 6.0436 3.6712 14 6 4.4692 5.9281 3.7212 15 6 5.1837 5.6705 2.5662 16 6 4.6285 5.8098 -1.1724 17 6 6.0324 6.2229 -1.6449 18 1 6.5505 5.4455 -2.2063 19 9 6.0654 7.4682 -2.2816 20 6 6.4296 6.2793 -0.1603 21 6 3.5374 -0.7492 0.0046 22 6 2.2447 -1.1198 0.0061 23 6 1.7396 -2.5396 0.0139 24 8 0.4807 -2.6011 -0.6595 25 14 2.9647 -3.6393 -0.8583 26 1 -0.3634 0.0056 1.0277 27 1 -0.3634 0.8872 -0.5187 28 1 -0.3634 -0.8927 -0.5090 29 1 1.8768 2.1241 0.0004 30 1 3.6832 3.3196 -0.0162 31 1 6.3009 3.6705 -0.9483 32 1 6.3920 3.5562 0.8257 33 1 2.6300 5.5594 0.3653 34 1 1.3565 6.0079 2.4244 35 1 2.5340 6.2406 4.5743 36 1 4.9862 6.0348 4.6634 37 1 6.2588 5.5758 2.6059 38 1 4.1704 5.0362 -1.7886 39 1 3.9640 6.6538 -0.9876 40 1 6.2576 7.2518 0.3010 41 1 7.4257 5.8848 0.0403 42 1 4.3981 -1.4018 0.0079 43 1 1.6178 -2.8763 1.0434 44 1 0.5141 -2.3151 -1.5826 45 1 2.4780 -5.0422 -0.8580 46 1 3.1636 -3.1715 -2.2536 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13458982_13287730.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:27:59 Heat of formation + Delta-G solvation = -5.606627 kcal Electronic energy + Delta-G solvation = -30283.918943 eV Core-core repulsion = 26056.387464 eV Total energy + Delta-G solvation = -4227.531479 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.153 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -48.56643 -42.46550 -41.51351 -39.94499 -38.70999 -37.94492 -35.26534 -33.73294 -32.03873 -31.83645 -31.50866 -28.82574 -27.34020 -27.04643 -26.17810 -24.95669 -23.44307 -23.13058 -22.50795 -21.09762 -20.59054 -19.91588 -18.93827 -18.29629 -17.54122 -17.37482 -17.07915 -16.82592 -16.62804 -16.50317 -16.12311 -15.98237 -15.67614 -15.50405 -15.46127 -15.39154 -14.96291 -14.73866 -14.40252 -14.34666 -14.23933 -14.09392 -13.65580 -13.52808 -13.47333 -13.31479 -13.21807 -13.00504 -12.49993 -12.36746 -12.34355 -12.17363 -11.96949 -11.80540 -11.31715 -11.23566 -11.02390 -10.89310 -10.13974 -9.80692 -9.63080 -9.55029 -9.20596 -4.88827 0.43074 0.50810 0.74387 1.03864 1.45007 1.63730 1.81245 2.05460 2.23431 2.57639 2.84511 3.16189 3.16377 3.27353 3.46115 3.55583 3.59497 3.65067 3.89082 3.90081 3.94945 4.13538 4.14222 4.23059 4.30572 4.33276 4.43960 4.45950 4.51772 4.53537 4.63164 4.66969 4.70366 4.73046 4.73700 4.82070 4.88172 4.95731 4.97449 4.99805 5.11869 5.16307 5.29250 5.42394 5.59102 5.65363 5.65792 5.66631 5.97140 6.11476 6.22973 6.32770 6.61482 7.33358 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.046 3.954 2 N -0.425 5.425 3 C 0.069 3.931 4 C -0.260 4.260 5 C 0.589 3.411 6 O -0.590 6.590 7 N -0.712 5.712 8 C 0.150 3.850 9 C -0.041 4.041 10 C -0.070 4.070 11 C -0.121 4.121 12 C -0.123 4.123 13 C -0.134 4.134 14 C -0.130 4.130 15 C -0.124 4.124 16 C -0.144 4.144 17 C 0.055 3.945 18 H 0.124 0.876 19 F -0.224 7.224 20 C -0.140 4.140 21 C -0.154 4.154 22 C -0.023 4.023 23 C -0.043 4.043 24 O -0.538 6.538 25 Si 0.773 3.227 26 H 0.078 0.922 27 H 0.104 0.896 28 H 0.111 0.889 29 H 0.202 0.798 30 H 0.409 0.591 31 H 0.075 0.925 32 H 0.064 0.936 33 H 0.142 0.858 34 H 0.139 0.861 35 H 0.130 0.870 36 H 0.128 0.872 37 H 0.124 0.876 38 H 0.097 0.903 39 H 0.103 0.897 40 H 0.097 0.903 41 H 0.095 0.905 42 H 0.156 0.844 43 H 0.132 0.868 44 H 0.388 0.612 45 H -0.288 1.288 46 H -0.293 1.293 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.657 1.605 1.055 5.975 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.094 4.094 2 N -0.099 5.099 3 C -0.069 4.069 4 C -0.270 4.270 5 C 0.379 3.621 6 O -0.472 6.472 7 N -0.364 5.364 8 C 0.026 3.974 9 C -0.041 4.041 10 C -0.070 4.070 11 C -0.139 4.139 12 C -0.141 4.141 13 C -0.152 4.152 14 C -0.148 4.148 15 C -0.142 4.142 16 C -0.181 4.181 17 C 0.019 3.981 18 H 0.142 0.858 19 F -0.205 7.205 20 C -0.178 4.178 21 C -0.178 4.178 22 C -0.132 4.132 23 C -0.153 4.153 24 O -0.347 6.347 25 Si 0.677 3.323 26 H 0.096 0.904 27 H 0.123 0.877 28 H 0.129 0.871 29 H 0.218 0.782 30 H 0.245 0.755 31 H 0.093 0.907 32 H 0.083 0.917 33 H 0.160 0.840 34 H 0.157 0.843 35 H 0.148 0.852 36 H 0.146 0.854 37 H 0.142 0.858 38 H 0.116 0.884 39 H 0.122 0.878 40 H 0.115 0.885 41 H 0.113 0.887 42 H 0.173 0.827 43 H 0.149 0.851 44 H 0.238 0.762 45 H -0.215 1.215 46 H -0.220 1.220 Dipole moment (debyes) X Y Z Total from point charges -5.305 0.519 0.949 5.414 hybrid contribution -0.909 0.856 -0.460 1.330 sum -6.214 1.375 0.490 6.383 Atomic orbital electron populations 1.22737 0.74694 1.07068 1.04900 1.43710 1.07988 1.04581 1.53647 1.22338 0.89213 0.93057 1.02246 1.20323 0.92134 0.94030 1.20539 1.17620 0.87851 0.81921 0.74696 1.90757 1.27547 1.76088 1.52814 1.45547 1.10349 1.04847 1.75629 1.21063 0.87762 0.86109 1.02474 1.20575 0.97078 0.93546 0.92951 1.19491 0.93917 1.00160 0.93434 1.21247 0.93106 1.00259 0.99285 1.21424 1.00955 0.99233 0.92477 1.21451 0.94728 1.00103 0.98939 1.21381 0.94866 0.99813 0.98787 1.21151 1.00454 1.00083 0.92464 1.23735 0.96443 1.02539 0.95399 1.23366 0.99713 0.82177 0.92836 0.85841 1.92787 1.97451 1.45834 1.84409 1.23641 0.99569 0.99989 0.94617 1.21814 0.95600 0.93485 1.06928 1.20810 0.90453 0.89770 1.12203 1.24733 0.92457 0.94071 1.04033 1.86537 1.29583 1.88795 1.29746 0.93309 0.84547 0.74569 0.79909 0.90353 0.87720 0.87057 0.78156 0.75471 0.90664 0.91719 0.84001 0.84298 0.85163 0.85397 0.85800 0.88411 0.87841 0.88464 0.88662 0.82702 0.85057 0.76213 1.21536 1.21977 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.38 10.71 127.77 1.37 0.99 16 2 N -0.43 1.19 3.09 -533.25 -1.65 -0.46 16 3 C 0.07 -0.19 10.83 83.91 0.91 0.72 16 4 C -0.26 -1.03 6.29 -19.04 -0.12 -1.15 16 5 C 0.59 4.17 7.81 86.62 0.68 4.85 16 6 O -0.59 -9.38 16.97 -4.12 -0.07 -9.45 16 7 N -0.71 0.31 5.30 -466.52 -2.47 -2.16 16 8 C 0.15 -0.13 4.93 86.38 0.43 0.30 16 9 C -0.04 0.17 0.63 -52.40 -0.03 0.14 16 10 C -0.07 0.17 4.42 -19.87 -0.09 0.08 16 11 C -0.12 0.52 8.43 22.27 0.19 0.71 16 12 C -0.12 0.39 10.05 22.27 0.22 0.62 16 13 C -0.13 0.15 10.05 22.27 0.22 0.37 16 14 C -0.13 -0.02 10.05 22.27 0.22 0.21 16 15 C -0.12 0.01 9.39 22.27 0.21 0.22 16 16 C -0.14 0.79 6.08 31.12 0.19 0.98 16 17 C 0.05 -0.13 5.32 31.12 0.17 0.03 16 18 H 0.12 -0.61 7.60 -2.39 -0.02 -0.63 16 19 F -0.22 -1.01 17.41 44.97 0.78 -0.23 16 20 C -0.14 0.48 6.76 31.12 0.21 0.69 16 21 C -0.15 -0.62 9.49 23.62 0.22 -0.40 16 22 C -0.02 0.00 6.14 40.98 0.25 0.25 16 23 C -0.04 0.10 2.98 71.23 0.21 0.32 16 24 O -0.54 1.53 9.95 -148.98 -1.48 0.05 16 25 Si 0.77 -0.93 31.12 68.60 2.13 1.21 16 26 H 0.08 -0.65 8.14 -2.38 -0.02 -0.67 16 27 H 0.10 -1.34 8.13 -2.38 -0.02 -1.35 16 28 H 0.11 -0.91 4.93 -2.39 -0.01 -0.92 16 29 H 0.20 -2.15 7.45 -2.91 -0.02 -2.17 16 30 H 0.41 -2.35 6.64 -92.71 -0.62 -2.96 16 31 H 0.08 -0.06 7.30 -2.39 -0.02 -0.08 16 32 H 0.06 0.17 8.14 -2.39 -0.02 0.15 16 33 H 0.14 -1.29 7.03 -2.91 -0.02 -1.31 16 34 H 0.14 -0.99 8.06 -2.91 -0.02 -1.01 16 35 H 0.13 -0.49 8.06 -2.91 -0.02 -0.51 16 36 H 0.13 -0.26 8.06 -2.91 -0.02 -0.28 16 37 H 0.12 -0.17 8.03 -2.91 -0.02 -0.20 16 38 H 0.10 -0.76 8.10 -2.39 -0.02 -0.78 16 39 H 0.10 -0.54 7.44 -2.39 -0.02 -0.56 16 40 H 0.10 -0.19 8.09 -2.38 -0.02 -0.21 16 41 H 0.09 -0.46 8.10 -2.39 -0.02 -0.48 16 42 H 0.16 0.49 6.89 -2.90 -0.02 0.47 16 43 H 0.13 -0.53 7.96 -2.39 -0.02 -0.55 16 44 H 0.39 -2.96 8.38 -74.06 -0.62 -3.58 16 45 H -0.29 -1.34 7.11 99.48 0.71 -0.63 16 46 H -0.29 -1.44 7.11 99.48 0.71 -0.73 16 Total: 0.00 -22.66 380.93 2.53 -20.13 By element: Atomic # 1 Polarization: -18.82 SS G_CDS: -0.18 Total: -19.00 kcal Atomic # 6 Polarization: 4.45 SS G_CDS: 5.46 Total: 9.91 kcal Atomic # 7 Polarization: 1.49 SS G_CDS: -4.12 Total: -2.62 kcal Atomic # 8 Polarization: -7.85 SS G_CDS: -1.55 Total: -9.40 kcal Atomic # 9 Polarization: -1.01 SS G_CDS: 0.78 Total: -0.23 kcal Atomic # 14 Polarization: -0.93 SS G_CDS: 2.13 Total: 1.21 kcal Total: -22.66 2.53 -20.13 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13458982_13287730.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 14.525 kcal (2) G-P(sol) polarization free energy of solvation -22.661 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -8.136 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.530 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.132 kcal (6) G-S(sol) free energy of system = (1) + (5) -5.607 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds