Wall clock time and date at job start Sat Mar 6 2021 21:28:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.38979 * 119.95540 * 2 1 4 4 O 1.35712 * 119.91275 * 359.97438 * 3 2 1 5 5 C 1.39017 * 120.17814 * 179.97438 * 3 2 1 6 6 C 1.50696 * 119.95763 * 180.02562 * 5 3 2 7 7 O 1.42893 * 109.47461 * 74.99452 * 6 5 3 8 8 Si 1.86303 * 109.47181 * 195.00096 * 6 5 3 9 9 C 1.37682 * 120.08593 * 359.73756 * 5 3 2 10 10 C 1.39759 * 119.91101 * 0.53543 * 9 5 3 11 11 C 1.47597 * 120.08539 * 179.74139 * 10 9 5 12 12 O 1.21581 * 120.00356 * 359.72337 * 11 10 9 13 13 N 1.34780 * 119.99813 * 179.72612 * 11 10 9 14 14 C 1.46503 * 120.00141 * 180.02562 * 13 11 10 15 15 C 1.53003 * 109.47105 * 180.73029 * 14 13 11 16 16 C 1.50690 * 112.84612 * 293.97903 * 15 14 13 17 17 C 1.38240 * 120.00046 * 124.45652 * 16 15 14 18 18 C 1.38228 * 120.00207 * 179.74090 * 17 16 15 19 19 C 1.38236 * 120.00239 * 0.55196 * 18 17 16 20 20 C 1.38238 * 119.99504 * 359.69995 * 19 18 17 21 21 C 1.38230 * 120.00237 * 0.02623 * 20 19 18 22 22 C 1.54055 * 113.60779 * 162.66930 * 15 14 13 23 23 C 1.53781 * 86.98408 * 270.88350 * 22 15 14 24 24 H 1.08997 * 113.61655 * 89.17028 * 23 22 15 25 25 F 1.39910 * 113.61179 * 219.98515 * 23 22 15 26 26 C 1.53782 * 87.17631 * 334.57262 * 23 22 15 27 27 C 1.37719 * 119.95684 * 180.02562 * 2 1 3 28 28 H 1.09003 * 109.47005 * 269.97903 * 1 2 3 29 29 H 1.08997 * 109.47078 * 29.98037 * 1 2 3 30 30 H 1.08995 * 109.46795 * 149.98297 * 1 2 3 31 31 H 0.96696 * 114.00024 * 89.99602 * 4 3 2 32 32 H 1.09006 * 109.46904 * 314.99629 * 6 5 3 33 33 H 0.96707 * 114.00078 * 60.00481 * 7 6 5 34 34 H 1.48496 * 109.99980 * 179.97438 * 8 6 5 35 35 H 1.48497 * 109.99566 * 301.31332 * 8 6 5 36 36 H 1.07997 * 120.04384 * 180.25053 * 9 5 3 37 37 H 0.96997 * 120.00184 * 0.02562 * 13 11 10 38 38 H 1.09000 * 109.47632 * 60.72407 * 14 13 11 39 39 H 1.09008 * 109.46586 * 300.72847 * 14 13 11 40 40 H 1.08007 * 119.99702 * 0.02562 * 17 16 15 41 41 H 1.08000 * 120.00113 * 180.27614 * 18 17 16 42 42 H 1.07997 * 120.00127 * 179.72058 * 19 18 17 43 43 H 1.07998 * 119.99489 * 179.97438 * 20 19 18 44 44 H 1.08000 * 120.00150 * 179.97438 * 21 20 19 45 45 H 1.09007 * 113.60882 * 156.38036 * 22 15 14 46 46 H 1.08993 * 113.69784 * 25.39997 * 22 15 14 47 47 H 1.08998 * 113.61251 * 140.02167 * 26 23 22 48 48 H 1.08999 * 113.61552 * 270.84903 * 26 23 22 49 49 H 1.07994 * 120.04714 * 359.97438 * 27 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2010 1.2041 0.0000 4 8 1.5197 2.3779 -0.0005 5 6 3.5911 1.2095 0.0005 6 6 4.3386 2.5181 0.0011 7 8 4.2715 3.1044 1.3025 8 14 6.1200 2.2159 -0.4529 9 6 4.2860 0.0209 0.0065 10 6 3.5919 -1.1921 0.0008 11 6 4.3329 -2.4686 0.0014 12 8 5.5487 -2.4658 0.0018 13 7 3.6617 -3.6374 0.0014 14 6 4.3971 -4.9044 0.0026 15 6 3.4057 -6.0696 -0.0161 16 6 2.5818 -6.1570 1.2426 17 6 1.2015 -6.1533 1.1668 18 6 0.4456 -6.2388 2.3210 19 6 1.0699 -6.3165 3.5519 20 6 2.4502 -6.3149 3.6281 21 6 3.2061 -6.2351 2.4735 22 6 4.0371 -7.4103 -0.4371 23 6 3.6939 -7.0241 -1.8855 24 1 4.4790 -6.4550 -2.3834 25 9 3.2277 -8.0951 -2.6556 26 6 2.5712 -6.1478 -1.3054 27 6 2.1947 -1.1932 -0.0005 28 1 -0.3633 -0.0004 1.0277 29 1 -0.3633 0.8901 -0.5135 30 1 -0.3633 -0.8898 -0.5141 31 1 1.3219 2.7182 0.8827 32 1 3.8881 3.1941 -0.7257 33 1 4.6550 2.5566 2.0010 34 1 6.8678 3.4988 -0.4565 35 1 6.7367 1.2707 0.5122 36 1 5.3659 0.0259 0.0110 37 1 2.6917 -3.6397 0.0006 38 1 5.0135 -4.9661 0.8995 39 1 5.0344 -4.9554 -0.8804 40 1 0.7136 -6.0883 0.2054 41 1 -0.6327 -6.2404 2.2615 42 1 0.4794 -6.3787 4.4540 43 1 2.9380 -6.3751 4.5898 44 1 4.2844 -6.2334 2.5330 45 1 3.4912 -8.2822 -0.0766 46 1 5.1080 -7.4702 -0.2432 47 1 2.4595 -5.1892 -1.8121 48 1 1.6249 -6.6748 -1.1832 49 1 1.6548 -2.1285 -0.0005 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13458982_13287732.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:28:03 Heat of formation + Delta-G solvation = -77.693891 kcal Electronic energy + Delta-G solvation = -34154.115681 eV Core-core repulsion = 29541.975842 eV Total energy + Delta-G solvation = -4612.139839 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 372.157 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -48.56942 -41.95698 -41.42206 -40.16269 -38.89018 -37.96156 -37.52808 -35.47626 -34.06037 -32.34927 -31.99150 -31.87543 -28.71019 -28.11325 -27.29031 -26.83699 -25.40833 -24.27817 -23.36552 -22.61369 -22.12807 -21.46010 -20.13369 -19.62726 -18.82729 -18.47006 -18.12276 -17.65897 -17.31993 -16.76774 -16.71109 -16.54086 -16.25668 -16.07628 -16.01375 -15.83048 -15.67886 -15.59130 -15.19514 -14.82658 -14.68925 -14.59001 -14.44839 -14.39547 -14.10766 -13.89872 -13.76400 -13.63456 -13.51940 -13.33718 -13.07274 -12.81301 -12.63065 -12.60340 -12.43039 -12.32075 -11.88003 -11.74921 -11.67568 -11.47203 -11.43145 -11.02981 -10.60757 -10.24935 -10.03888 -9.95735 -9.77208 -9.69305 -4.94511 -0.41819 0.02580 0.27317 0.36375 1.25251 1.60993 1.62620 1.92240 1.95430 2.54413 2.68643 2.98278 3.05256 3.08905 3.24906 3.30114 3.37354 3.43369 3.47826 3.54345 3.65314 3.72979 3.90458 3.93295 3.96858 4.04642 4.11304 4.14368 4.25990 4.35185 4.45379 4.46267 4.46578 4.49513 4.50582 4.53540 4.57602 4.58373 4.65386 4.67876 4.80710 4.94296 4.96305 4.99137 5.03478 5.06043 5.12124 5.22938 5.23785 5.44238 5.49122 5.50530 5.51742 5.94529 6.32027 6.33798 6.53626 7.09248 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.115 4.115 2 C -0.117 4.117 3 C 0.162 3.838 4 O -0.488 6.488 5 C -0.148 4.148 6 C -0.066 4.066 7 O -0.528 6.528 8 Si 0.684 3.316 9 C -0.053 4.053 10 C -0.138 4.138 11 C 0.562 3.438 12 O -0.532 6.532 13 N -0.721 5.721 14 C 0.145 3.855 15 C -0.056 4.056 16 C -0.070 4.070 17 C -0.120 4.120 18 C -0.116 4.116 19 C -0.119 4.119 20 C -0.115 4.115 21 C -0.108 4.108 22 C -0.139 4.139 23 C 0.066 3.934 24 H 0.112 0.888 25 F -0.204 7.204 26 C -0.156 4.156 27 C -0.065 4.065 28 H 0.072 0.928 29 H 0.078 0.922 30 H 0.071 0.929 31 H 0.399 0.601 32 H 0.124 0.876 33 H 0.375 0.625 34 H -0.253 1.253 35 H -0.255 1.255 36 H 0.145 0.855 37 H 0.401 0.599 38 H 0.079 0.921 39 H 0.079 0.921 40 H 0.126 0.874 41 H 0.123 0.877 42 H 0.122 0.878 43 H 0.123 0.877 44 H 0.121 0.879 45 H 0.103 0.897 46 H 0.088 0.912 47 H 0.086 0.914 48 H 0.105 0.895 49 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.826 -1.506 1.047 4.243 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.171 4.171 2 C -0.118 4.118 3 C 0.116 3.884 4 O -0.299 6.299 5 C -0.149 4.149 6 C -0.176 4.176 7 O -0.334 6.334 8 Si 0.585 3.415 9 C -0.072 4.072 10 C -0.141 4.141 11 C 0.350 3.650 12 O -0.409 6.409 13 N -0.374 5.374 14 C 0.022 3.978 15 C -0.056 4.056 16 C -0.070 4.070 17 C -0.138 4.138 18 C -0.134 4.134 19 C -0.137 4.137 20 C -0.133 4.133 21 C -0.126 4.126 22 C -0.177 4.177 23 C 0.030 3.970 24 H 0.130 0.870 25 F -0.184 7.184 26 C -0.194 4.194 27 C -0.084 4.084 28 H 0.091 0.909 29 H 0.097 0.903 30 H 0.089 0.911 31 H 0.257 0.743 32 H 0.142 0.858 33 H 0.222 0.778 34 H -0.177 1.177 35 H -0.180 1.180 36 H 0.163 0.837 37 H 0.237 0.763 38 H 0.097 0.903 39 H 0.097 0.903 40 H 0.143 0.857 41 H 0.141 0.859 42 H 0.140 0.860 43 H 0.141 0.859 44 H 0.139 0.861 45 H 0.121 0.879 46 H 0.107 0.893 47 H 0.104 0.896 48 H 0.123 0.877 49 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges -2.369 -1.056 0.341 2.616 hybrid contribution -0.901 -0.189 1.736 1.965 sum -3.270 -1.245 2.076 4.069 Atomic orbital electron populations 1.20737 0.89719 1.03853 1.02806 1.20206 0.97309 0.92058 1.02179 1.18306 0.88785 0.85287 0.95995 1.84660 1.75625 1.35673 1.33967 1.20564 0.93819 0.95833 1.04641 1.24901 1.10526 0.93838 0.88373 1.86613 1.82798 1.47665 1.16368 0.94687 0.74311 0.81245 0.91265 1.21157 1.00870 0.90215 0.94952 1.19774 0.93418 0.93335 1.07619 1.18111 0.87188 0.83479 0.76270 1.90820 1.13238 1.87509 1.49344 1.45769 1.10543 1.05272 1.75816 1.21168 0.92852 0.80384 1.03424 1.20807 0.96190 0.95845 0.92761 1.19375 0.93383 1.00911 0.93299 1.21127 0.93091 1.00789 0.98781 1.21181 1.00048 0.99692 0.92478 1.21237 0.94836 0.99726 0.97948 1.21192 0.94121 0.99570 0.98463 1.20980 1.00013 0.99795 0.91855 1.23691 1.02841 0.96780 0.94359 1.23093 0.97688 0.86213 0.90033 0.87003 1.92834 1.89956 1.58060 1.77583 1.23818 0.98926 1.01586 0.95028 1.21094 0.92605 0.97781 0.96875 0.90900 0.90324 0.91051 0.74317 0.85814 0.77762 1.17727 1.17969 0.83734 0.76281 0.90274 0.90273 0.85660 0.85870 0.85984 0.85917 0.86056 0.87866 0.89291 0.89580 0.87671 0.85190 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.11 0.27 9.79 36.01 0.35 0.62 16 2 C -0.12 0.09 5.89 -104.54 -0.62 -0.53 16 3 C 0.16 0.03 6.66 -39.02 -0.26 -0.23 16 4 O -0.49 0.11 11.84 -18.84 -0.22 -0.11 16 5 C -0.15 -0.06 5.27 -104.54 -0.55 -0.61 16 6 C -0.07 -0.01 2.37 36.00 0.09 0.07 16 7 O -0.53 -0.37 12.88 -35.23 -0.45 -0.82 16 8 Si 0.68 0.10 30.25 -169.99 -5.14 -5.04 16 9 C -0.05 -0.06 8.20 -39.22 -0.32 -0.38 16 10 C -0.14 -0.09 5.87 -104.96 -0.62 -0.71 16 11 C 0.56 0.92 7.76 -12.44 -0.10 0.82 16 12 O -0.53 -2.74 16.34 5.29 0.09 -2.65 16 13 N -0.72 0.88 5.11 -61.32 -0.31 0.57 16 14 C 0.15 -0.23 4.77 -4.04 -0.02 -0.25 16 15 C -0.06 0.15 0.67 -154.70 -0.10 0.04 16 16 C -0.07 0.11 4.69 -104.63 -0.49 -0.38 16 17 C -0.12 0.21 9.14 -39.58 -0.36 -0.15 16 18 C -0.12 0.15 10.05 -39.59 -0.40 -0.25 16 19 C -0.12 0.10 10.05 -39.58 -0.40 -0.30 16 20 C -0.12 0.07 10.05 -39.58 -0.40 -0.32 16 21 C -0.11 0.09 9.28 -39.58 -0.37 -0.28 16 22 C -0.14 0.32 7.13 -25.77 -0.18 0.13 16 23 C 0.07 -0.11 5.31 -25.92 -0.14 -0.25 16 24 H 0.11 -0.32 7.61 -51.93 -0.40 -0.71 16 25 F -0.20 -0.34 17.41 2.25 0.04 -0.30 16 26 C -0.16 0.45 6.24 -25.92 -0.16 0.28 16 27 C -0.06 0.08 9.18 -39.22 -0.36 -0.28 16 28 H 0.07 -0.22 8.14 -51.93 -0.42 -0.65 16 29 H 0.08 -0.13 7.52 -51.93 -0.39 -0.52 16 30 H 0.07 -0.24 8.08 -51.93 -0.42 -0.66 16 31 H 0.40 -1.36 9.06 45.56 0.41 -0.95 16 32 H 0.12 0.03 7.82 -51.93 -0.41 -0.38 16 33 H 0.37 -0.74 8.70 45.56 0.40 -0.34 16 34 H -0.25 -0.75 7.11 56.52 0.40 -0.35 16 35 H -0.25 -0.59 6.68 56.52 0.38 -0.22 16 36 H 0.15 0.22 4.44 -52.49 -0.23 -0.01 16 37 H 0.40 -1.21 6.24 -40.82 -0.25 -1.46 16 38 H 0.08 -0.06 7.27 -51.93 -0.38 -0.44 16 39 H 0.08 -0.12 7.31 -51.92 -0.38 -0.50 16 40 H 0.13 -0.41 5.96 -52.48 -0.31 -0.72 16 41 H 0.12 -0.34 8.06 -52.49 -0.42 -0.76 16 42 H 0.12 -0.26 8.06 -52.49 -0.42 -0.68 16 43 H 0.12 -0.22 8.06 -52.49 -0.42 -0.64 16 44 H 0.12 -0.19 7.46 -52.49 -0.39 -0.58 16 45 H 0.10 -0.16 8.10 -51.93 -0.42 -0.58 16 46 H 0.09 -0.27 8.10 -51.93 -0.42 -0.69 16 47 H 0.09 -0.31 7.90 -51.93 -0.41 -0.72 16 48 H 0.11 -0.29 6.24 -51.93 -0.32 -0.62 16 49 H 0.13 -0.47 6.39 -52.49 -0.34 -0.80 16 LS Contribution 402.49 15.07 6.07 6.07 Total: 0.00 -8.31 402.49 -10.92 -19.23 By element: Atomic # 1 Polarization: -8.41 SS G_CDS: -5.58 Total: -13.99 kcal Atomic # 6 Polarization: 2.46 SS G_CDS: -5.40 Total: -2.94 kcal Atomic # 7 Polarization: 0.88 SS G_CDS: -0.31 Total: 0.57 kcal Atomic # 8 Polarization: -3.00 SS G_CDS: -0.59 Total: -3.59 kcal Atomic # 9 Polarization: -0.34 SS G_CDS: 0.04 Total: -0.30 kcal Atomic # 14 Polarization: 0.10 SS G_CDS: -5.14 Total: -5.04 kcal Total LS contribution 6.07 Total: 6.07 kcal Total: -8.31 -10.92 -19.23 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13458982_13287732.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -58.469 kcal (2) G-P(sol) polarization free energy of solvation -8.306 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -66.774 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.920 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.225 kcal (6) G-S(sol) free energy of system = (1) + (5) -77.694 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds