Wall clock time and date at job start Sat Mar 6 2021 21:28:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86295 * 109.47297 * 2 1 4 4 C 1.50706 * 109.47206 * 120.00071 * 2 1 3 5 5 C 1.38359 * 120.34564 * 64.72468 * 4 2 1 6 6 C 1.40020 * 118.28345 * 179.74448 * 5 4 2 7 7 C 1.47841 * 120.55983 * 180.25918 * 6 5 4 8 8 O 1.21557 * 119.99850 * 0.27491 * 7 6 5 9 9 N 1.34772 * 120.00297 * 180.26904 * 7 6 5 10 10 C 1.46501 * 120.00073 * 180.02562 * 9 7 6 11 11 C 1.53005 * 109.47187 * 179.04270 * 10 9 7 12 12 C 1.50694 * 112.85463 * 66.14036 * 11 10 9 13 13 C 1.38238 * 119.99841 * 245.82954 * 12 11 10 14 14 C 1.38236 * 119.99921 * 179.78458 * 13 12 11 15 15 C 1.38241 * 119.99838 * 0.46373 * 14 13 12 16 16 C 1.38232 * 119.99824 * 359.76928 * 15 14 13 17 17 C 1.38233 * 120.00481 * 0.02562 * 16 15 14 18 18 C 1.53786 * 113.60774 * 294.94052 * 11 10 9 19 19 C 1.53773 * 87.08168 * 270.88484 * 18 11 10 20 20 H 1.09006 * 113.61467 * 89.20240 * 19 18 11 21 21 F 1.39906 * 113.61498 * 220.01910 * 19 18 11 22 22 C 1.53780 * 87.08621 * 334.57063 * 19 18 11 23 23 C 1.39527 * 118.88516 * 0.52533 * 6 5 4 24 24 N 1.31695 * 120.56378 * 359.73600 * 23 6 5 25 25 C 1.31926 * 121.87826 * 359.97438 * 24 23 6 26 26 H 0.96700 * 114.00092 * 299.99978 * 1 2 3 27 27 H 1.09007 * 109.47117 * 239.99996 * 2 1 3 28 28 H 1.48503 * 110.00133 * 178.68053 * 3 2 1 29 29 H 1.48503 * 110.00014 * 299.99988 * 3 2 1 30 30 H 1.07997 * 120.85569 * 359.97438 * 5 4 2 31 31 H 0.97000 * 120.00078 * 0.02562 * 9 7 6 32 32 H 1.09009 * 109.47106 * 299.03292 * 10 9 7 33 33 H 1.08992 * 109.47822 * 59.03371 * 10 9 7 34 34 H 1.07993 * 120.00211 * 0.02562 * 13 12 11 35 35 H 1.08001 * 120.00203 * 180.25259 * 14 13 12 36 36 H 1.07995 * 120.00007 * 179.78747 * 15 14 13 37 37 H 1.07999 * 119.99681 * 179.97438 * 16 15 14 38 38 H 1.08001 * 120.00381 * 179.97438 * 17 16 15 39 39 H 1.08996 * 113.61388 * 25.43983 * 18 11 10 40 40 H 1.09002 * 113.60998 * 156.33854 * 18 11 10 41 41 H 1.09004 * 113.61256 * 270.88716 * 22 19 18 42 42 H 1.08996 * 113.61896 * 139.98227 * 22 19 18 43 43 H 1.08003 * 119.71536 * 179.70888 * 23 6 5 44 44 H 1.08004 * 119.45957 * 179.97438 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 1.6837 -2.0600 1.4085 6 6 2.1751 -2.6778 2.5650 7 6 1.9447 -4.1186 2.8033 8 8 1.3283 -4.7783 1.9894 9 7 2.4181 -4.7006 3.9229 10 6 2.1902 -6.1284 4.1588 11 6 2.8460 -6.5383 5.4790 12 6 2.2000 -5.8939 6.6783 13 6 2.9103 -4.9865 7.4418 14 6 2.3162 -4.3920 8.5393 15 6 1.0150 -4.7121 8.8790 16 6 0.3064 -5.6232 8.1183 17 6 0.8990 -6.2145 7.0183 18 6 4.3793 -6.4208 5.4676 19 6 4.4077 -7.8661 4.9433 20 1 4.3688 -7.9370 3.8562 21 9 5.4263 -8.6452 5.5024 22 6 3.0420 -8.0567 5.6241 23 6 2.8811 -1.9096 3.4914 24 7 3.0865 -0.6262 3.2793 25 6 2.6404 -0.0189 2.1964 26 1 -0.3933 0.4417 0.7650 27 1 1.7923 -0.5139 -0.8900 28 1 3.5346 1.7702 0.0321 29 1 1.5615 2.4678 -1.2085 30 1 1.1290 -2.6231 0.6727 31 1 2.9097 -4.1741 4.5726 32 1 1.1186 -6.3217 4.2101 33 1 2.6247 -6.7055 3.3426 34 1 3.9280 -4.7391 7.1786 35 1 2.8698 -3.6799 9.1335 36 1 0.5520 -4.2503 9.7384 37 1 -0.7100 -5.8736 8.3839 38 1 0.3454 -6.9266 6.4242 39 1 4.7558 -5.6893 4.7526 40 1 4.8159 -6.3077 6.4600 41 1 3.1130 -8.3908 6.6592 42 1 2.3391 -8.6460 5.0353 43 1 3.2621 -2.3715 4.3903 44 1 2.8308 1.0357 2.0623 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13458982_13287814.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:28:10 Heat of formation + Delta-G solvation = -19.219902 kcal Electronic energy + Delta-G solvation = -29443.229282 eV Core-core repulsion = 25242.418965 eV Total energy + Delta-G solvation = -4200.810317 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 343.137 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -48.58550 -42.05812 -41.39606 -40.11273 -38.75681 -37.93542 -35.58413 -33.78923 -33.18124 -32.00808 -31.84136 -28.84266 -27.28824 -27.14001 -25.74107 -24.62833 -23.84946 -23.21019 -22.51157 -21.66419 -20.12806 -19.12224 -18.47284 -18.15804 -17.85125 -17.70686 -17.40944 -16.75998 -16.59700 -16.49907 -16.24759 -16.02338 -15.84970 -15.53678 -15.47987 -15.06043 -14.85326 -14.63088 -14.39304 -14.32220 -14.27698 -14.22022 -13.65712 -13.53522 -13.50770 -13.37154 -12.73008 -12.52306 -12.43820 -12.19799 -12.18864 -11.78878 -11.51725 -11.34761 -11.25802 -11.10261 -10.62502 -10.59202 -10.39891 -10.17615 -9.81574 -9.64339 -5.02731 -0.59748 -0.05335 0.41214 0.50191 1.22302 1.61143 1.63260 1.84394 1.97408 2.60838 2.82409 3.07437 3.12871 3.22016 3.36808 3.40981 3.45284 3.54403 3.59803 3.64376 3.71839 3.75400 3.86311 4.08392 4.11640 4.13547 4.19130 4.24919 4.30729 4.45420 4.47317 4.59596 4.63986 4.66727 4.68777 4.72113 4.80815 4.84660 4.91178 4.94727 5.10121 5.15232 5.18309 5.26761 5.31000 5.58943 5.64132 5.65785 6.10376 6.27812 6.62077 6.70177 6.96313 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.554 6.554 2 C -0.073 4.073 3 Si 0.783 3.217 4 C -0.176 4.176 5 C -0.002 4.002 6 C -0.197 4.197 7 C 0.566 3.434 8 O -0.572 6.572 9 N -0.704 5.704 10 C 0.146 3.854 11 C -0.041 4.041 12 C -0.073 4.073 13 C -0.122 4.122 14 C -0.124 4.124 15 C -0.132 4.132 16 C -0.130 4.130 17 C -0.122 4.122 18 C -0.148 4.148 19 C 0.055 3.945 20 H 0.123 0.877 21 F -0.224 7.224 22 C -0.137 4.137 23 C 0.147 3.853 24 N -0.491 5.491 25 C 0.131 3.869 26 H 0.397 0.603 27 H 0.111 0.889 28 H -0.277 1.277 29 H -0.295 1.295 30 H 0.137 0.863 31 H 0.412 0.588 32 H 0.072 0.928 33 H 0.081 0.919 34 H 0.142 0.858 35 H 0.138 0.862 36 H 0.131 0.869 37 H 0.129 0.871 38 H 0.125 0.875 39 H 0.097 0.903 40 H 0.107 0.893 41 H 0.097 0.903 42 H 0.096 0.904 43 H 0.187 0.813 44 H 0.186 0.814 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.494 3.690 4.545 5.876 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.362 6.362 2 C -0.183 4.183 3 Si 0.687 3.313 4 C -0.178 4.178 5 C -0.028 4.028 6 C -0.202 4.202 7 C 0.353 3.647 8 O -0.452 6.452 9 N -0.356 5.356 10 C 0.023 3.977 11 C -0.042 4.042 12 C -0.073 4.073 13 C -0.140 4.140 14 C -0.142 4.142 15 C -0.150 4.150 16 C -0.148 4.148 17 C -0.140 4.140 18 C -0.185 4.185 19 C 0.019 3.981 20 H 0.141 0.859 21 F -0.205 7.205 22 C -0.176 4.176 23 C -0.012 4.012 24 N -0.199 5.199 25 C -0.024 4.024 26 H 0.247 0.753 27 H 0.129 0.871 28 H -0.203 1.203 29 H -0.223 1.223 30 H 0.155 0.845 31 H 0.250 0.750 32 H 0.090 0.910 33 H 0.099 0.901 34 H 0.160 0.840 35 H 0.155 0.845 36 H 0.149 0.851 37 H 0.147 0.853 38 H 0.143 0.857 39 H 0.116 0.884 40 H 0.125 0.875 41 H 0.116 0.884 42 H 0.115 0.885 43 H 0.203 0.797 44 H 0.203 0.797 Dipole moment (debyes) X Y Z Total from point charges 1.115 3.926 3.672 5.490 hybrid contribution -0.383 -1.246 -0.570 1.423 sum 0.732 2.680 3.101 4.164 Atomic orbital electron populations 1.86513 1.16971 1.82184 1.50527 1.25243 0.85504 1.11464 0.96097 0.93785 0.78057 0.73927 0.85545 1.21454 1.01949 0.94857 0.99560 1.21648 0.92174 0.94005 0.95006 1.20982 1.05753 0.94594 0.98878 1.18141 0.78412 0.86696 0.81446 1.90809 1.42367 1.65438 1.46583 1.45648 1.56973 1.11052 1.21922 1.21189 1.00905 0.80569 0.95037 1.20561 0.95071 0.96398 0.92150 1.19468 0.94169 0.97675 0.96004 1.21315 1.00667 0.96635 0.95364 1.21442 0.95314 1.00010 0.97424 1.21459 0.95312 0.98068 1.00183 1.21382 1.00623 0.97213 0.95593 1.21134 0.95019 1.00255 0.97543 1.23787 0.94128 0.96464 1.04158 1.23366 0.84890 0.90748 0.99116 0.85939 1.92791 1.62957 1.77302 1.87412 1.23624 0.96444 0.94425 1.03067 1.23375 0.91152 0.89200 0.97456 1.67800 1.19939 1.10826 1.21312 1.23236 0.90563 1.00847 0.87800 0.75296 0.87137 1.20313 1.22269 0.84544 0.74972 0.91013 0.90130 0.83981 0.84460 0.85136 0.85335 0.85690 0.88406 0.87480 0.88442 0.88547 0.79671 0.79737 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 0.47 12.84 -148.98 -1.91 -1.45 16 2 C -0.07 0.17 2.82 71.24 0.20 0.37 16 3 Si 0.78 -3.97 29.83 68.60 2.05 -1.92 16 4 C -0.18 0.21 5.35 -19.81 -0.11 0.11 16 5 C 0.00 0.00 9.38 22.73 0.21 0.21 16 6 C -0.20 -0.23 5.89 -19.99 -0.12 -0.35 16 7 C 0.57 1.92 7.78 86.79 0.68 2.59 16 8 O -0.57 -6.73 16.42 -3.90 -0.06 -6.80 16 9 N -0.70 2.26 5.11 -465.96 -2.38 -0.12 16 10 C 0.15 -0.50 4.85 86.38 0.42 -0.08 16 11 C -0.04 0.24 0.63 -52.40 -0.03 0.21 16 12 C -0.07 0.27 4.61 -19.87 -0.09 0.18 16 13 C -0.12 0.56 9.05 22.27 0.20 0.76 16 14 C -0.12 0.40 10.05 22.27 0.22 0.62 16 15 C -0.13 0.22 10.05 22.27 0.22 0.44 16 16 C -0.13 0.13 10.05 22.27 0.22 0.35 16 17 C -0.12 0.19 9.33 22.27 0.21 0.40 16 18 C -0.15 0.98 6.03 31.12 0.19 1.17 16 19 C 0.05 -0.19 5.31 31.12 0.17 -0.02 16 20 H 0.12 -0.73 7.62 -2.38 -0.02 -0.75 16 21 F -0.22 -0.84 17.41 44.97 0.78 -0.06 16 22 C -0.14 0.65 7.00 31.12 0.22 0.86 16 23 C 0.15 -0.36 10.71 85.02 0.91 0.55 16 24 N -0.49 0.24 10.35 -194.75 -2.01 -1.77 16 25 C 0.13 -0.35 9.84 84.70 0.83 0.48 16 26 H 0.40 -3.67 8.70 -74.06 -0.64 -4.32 16 27 H 0.11 -0.10 7.96 -2.38 -0.02 -0.11 16 28 H -0.28 0.26 7.11 99.48 0.71 0.97 16 29 H -0.30 -0.84 7.11 99.48 0.71 -0.13 16 30 H 0.14 0.72 7.74 -2.91 -0.02 0.70 16 31 H 0.41 -3.27 6.28 -92.71 -0.58 -3.86 16 32 H 0.07 -0.07 7.95 -2.38 -0.02 -0.09 16 33 H 0.08 -0.25 7.31 -2.39 -0.02 -0.27 16 34 H 0.14 -1.24 6.41 -2.91 -0.02 -1.26 16 35 H 0.14 -0.89 8.06 -2.91 -0.02 -0.91 16 36 H 0.13 -0.55 8.06 -2.91 -0.02 -0.57 16 37 H 0.13 -0.40 8.06 -2.91 -0.02 -0.42 16 38 H 0.13 -0.38 8.06 -2.91 -0.02 -0.41 16 39 H 0.10 -0.87 7.89 -2.39 -0.02 -0.89 16 40 H 0.11 -0.69 6.79 -2.39 -0.02 -0.71 16 41 H 0.10 -0.29 8.10 -2.38 -0.02 -0.31 16 42 H 0.10 -0.61 8.10 -2.39 -0.02 -0.63 16 43 H 0.19 -1.69 6.42 -2.91 -0.02 -1.71 16 44 H 0.19 -1.52 4.91 -2.91 -0.01 -1.53 16 Total: 0.00 -21.34 369.29 0.88 -20.46 By element: Atomic # 1 Polarization: -17.07 SS G_CDS: -0.13 Total: -17.19 kcal Atomic # 6 Polarization: 4.30 SS G_CDS: 4.56 Total: 8.86 kcal Atomic # 7 Polarization: 2.51 SS G_CDS: -4.40 Total: -1.89 kcal Atomic # 8 Polarization: -6.27 SS G_CDS: -1.98 Total: -8.24 kcal Atomic # 9 Polarization: -0.84 SS G_CDS: 0.78 Total: -0.06 kcal Atomic # 14 Polarization: -3.97 SS G_CDS: 2.05 Total: -1.92 kcal Total: -21.34 0.88 -20.46 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13458982_13287814.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 1.237 kcal (2) G-P(sol) polarization free energy of solvation -21.341 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -20.104 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.884 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.456 kcal (6) G-S(sol) free energy of system = (1) + (5) -19.220 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds