Wall clock time and date at job start Sat Mar 6 2021 21:28:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.36419 * 125.80519 * 2 1 4 4 C 1.47387 * 127.18600 * 359.97090 * 3 2 1 5 5 O 1.21608 * 119.99890 * 359.71560 * 4 3 2 6 6 N 1.34782 * 119.99777 * 179.97438 * 4 3 2 7 7 C 1.46491 * 119.99764 * 179.72519 * 6 4 3 8 8 C 1.53005 * 109.47120 * 175.11144 * 7 6 4 9 9 C 1.50702 * 112.84957 * 294.01122 * 8 7 6 10 10 C 1.38235 * 120.00279 * 113.50817 * 9 8 7 11 11 C 1.38231 * 119.99766 * 179.81225 * 10 9 8 12 12 C 1.38238 * 120.00312 * 0.41847 * 11 10 9 13 13 C 1.38234 * 119.99906 * 359.81486 * 12 11 10 14 14 C 1.38238 * 119.99628 * 293.78237 * 9 8 7 15 15 C 1.53779 * 113.61686 * 162.70372 * 8 7 6 16 16 C 1.53784 * 87.07904 * 270.88394 * 15 8 7 17 17 H 1.08994 * 113.61913 * 89.11406 * 16 15 8 18 18 F 1.39901 * 113.69226 * 220.01152 * 16 15 8 19 19 C 1.53775 * 113.61496 * 65.20202 * 8 7 6 20 20 C 1.47012 * 105.62081 * 179.71428 * 3 2 1 21 21 C 1.34180 * 105.95538 * 0.25747 * 20 3 2 22 22 C 1.50693 * 125.44243 * 180.02562 * 21 20 3 23 23 O 1.42905 * 109.46899 * 300.00424 * 22 21 20 24 24 Si 1.86302 * 109.47610 * 180.02562 * 22 21 20 25 25 O 1.33652 * 125.80316 * 180.15667 * 2 1 3 26 26 H 1.08997 * 109.46985 * 89.99927 * 1 2 3 27 27 H 1.08999 * 109.47104 * 210.00080 * 1 2 3 28 28 H 1.09000 * 109.47115 * 330.00399 * 1 2 3 29 29 H 0.97000 * 119.99872 * 359.73109 * 6 4 3 30 30 H 1.08995 * 109.47608 * 295.10943 * 7 6 4 31 31 H 1.09000 * 109.47457 * 55.11187 * 7 6 4 32 32 H 1.07995 * 119.99861 * 0.02562 * 10 9 8 33 33 H 1.08002 * 119.99850 * 180.21355 * 11 10 9 34 34 H 1.08004 * 119.99964 * 179.79234 * 12 11 10 35 35 H 1.08004 * 120.00022 * 179.97438 * 13 12 11 36 36 H 1.08003 * 120.00321 * 359.97438 * 14 9 8 37 37 H 1.08991 * 113.61365 * 25.43172 * 15 8 7 38 38 H 1.09001 * 113.61438 * 156.33666 * 15 8 7 39 39 H 1.09001 * 113.62021 * 203.67229 * 19 8 7 40 40 H 1.09004 * 113.61697 * 334.49038 * 19 8 7 41 41 H 1.08004 * 127.02364 * 180.24451 * 20 3 2 42 42 H 1.08996 * 109.47387 * 59.99947 * 22 21 20 43 43 H 0.96697 * 113.99761 * 299.99594 * 23 22 21 44 44 H 1.48498 * 110.00010 * 179.97438 * 24 22 21 45 45 H 1.48496 * 109.99966 * 301.32030 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3051 1.1064 0.0000 4 6 1.8739 2.5158 -0.0006 5 8 0.6890 2.7891 -0.0064 6 7 2.7930 3.5016 0.0000 7 6 2.3645 4.9024 -0.0067 8 6 3.5892 5.8110 0.1185 9 6 4.2840 5.6767 1.4490 10 6 5.5579 5.1438 1.5129 11 6 6.1966 5.0243 2.7330 12 6 5.5581 5.4296 3.8901 13 6 4.2824 5.9580 3.8268 14 6 3.6451 6.0812 2.6062 15 6 3.3202 7.2679 -0.2938 16 6 3.7081 6.8524 -1.7228 17 1 2.8682 6.4898 -2.3153 18 9 4.4764 7.8076 -2.3969 19 6 4.5426 5.7290 -1.0852 20 6 3.6849 0.5991 0.0071 21 6 3.5860 -0.7390 0.0048 22 6 4.7459 -1.7010 0.0106 23 8 5.5496 -1.4850 -1.1511 24 14 4.1027 -3.4495 0.0037 25 8 2.2888 -1.0840 -0.0030 26 1 -0.3633 0.0000 -1.0276 27 1 -0.3633 -0.8900 0.5138 28 1 -0.3633 0.8900 0.5138 29 1 3.7382 3.2835 0.0048 30 1 1.8453 5.1192 -0.9402 31 1 1.6925 5.0809 0.8328 32 1 6.0554 4.8241 0.6093 33 1 7.1933 4.6111 2.7825 34 1 6.0559 5.3330 4.8438 35 1 3.7833 6.2743 4.7309 36 1 2.6482 6.4939 2.5568 37 1 2.2762 7.5643 -0.1935 38 1 4.0094 7.9831 0.1552 39 1 5.5660 6.0234 -0.8526 40 1 4.4865 4.7826 -1.6231 41 1 4.5928 1.1841 0.0127 42 1 5.3482 -1.5386 0.9043 43 1 5.0774 -1.6124 -1.9853 44 1 5.2370 -4.4079 0.0087 45 1 3.2391 -3.6777 1.1899 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13458982_13308374.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:28:14 Heat of formation + Delta-G solvation = -48.927826 kcal Electronic energy + Delta-G solvation = -30538.671716 eV Core-core repulsion = 26211.543027 eV Total energy + Delta-G solvation = -4327.128689 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.141 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -48.54756 -43.74879 -41.67689 -40.10657 -38.83792 -38.11982 -35.34060 -34.08674 -33.11680 -32.12522 -31.94739 -29.71404 -28.56897 -27.26506 -25.86769 -25.10964 -23.90980 -23.30931 -22.61836 -22.03562 -20.95838 -19.80944 -18.94687 -18.45414 -17.93934 -17.67654 -17.58502 -16.89654 -16.78152 -16.60333 -16.16925 -16.08392 -15.84497 -15.74510 -15.55148 -15.50020 -14.94409 -14.55505 -14.40565 -14.37857 -14.24025 -14.15468 -13.97895 -13.87070 -13.69270 -13.60635 -13.44434 -12.93374 -12.84425 -12.59179 -12.52147 -12.29368 -12.17215 -11.88758 -11.44000 -11.38577 -11.03000 -10.89251 -10.67545 -10.13478 -9.90418 -9.72603 -9.56076 -5.10057 0.29599 0.33204 0.41301 0.82864 1.08794 1.38606 1.72430 1.87314 2.08284 2.35750 2.74245 3.01285 3.11646 3.13348 3.30383 3.35481 3.42796 3.51976 3.73435 3.76197 3.78940 3.98805 4.01038 4.08772 4.11455 4.16802 4.20699 4.38932 4.40992 4.48139 4.51804 4.52525 4.53877 4.57268 4.60198 4.65534 4.70344 4.80100 4.84786 4.99414 5.03722 5.09150 5.14817 5.20325 5.35391 5.48830 5.54901 5.56400 5.90111 5.99576 6.30829 6.46054 7.21041 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 C 0.096 3.904 3 C -0.253 4.253 4 C 0.594 3.406 5 O -0.539 6.539 6 N -0.719 5.719 7 C 0.148 3.852 8 C -0.055 4.055 9 C -0.067 4.067 10 C -0.118 4.118 11 C -0.116 4.116 12 C -0.120 4.120 13 C -0.116 4.116 14 C -0.109 4.109 15 C -0.139 4.139 16 C 0.066 3.934 17 H 0.112 0.888 18 F -0.204 7.204 19 C -0.155 4.155 20 C -0.148 4.148 21 C -0.056 4.056 22 C -0.027 4.027 23 O -0.530 6.530 24 Si 0.703 3.297 25 O -0.168 6.168 26 H 0.093 0.907 27 H 0.081 0.919 28 H 0.110 0.890 29 H 0.402 0.598 30 H 0.075 0.925 31 H 0.080 0.920 32 H 0.123 0.877 33 H 0.123 0.877 34 H 0.122 0.878 35 H 0.123 0.877 36 H 0.122 0.878 37 H 0.088 0.912 38 H 0.103 0.897 39 H 0.104 0.896 40 H 0.085 0.915 41 H 0.157 0.843 42 H 0.133 0.867 43 H 0.384 0.616 44 H -0.246 1.246 45 H -0.253 1.253 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.291 -1.643 -0.607 1.776 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.143 4.143 2 C 0.042 3.958 3 C -0.257 4.257 4 C 0.383 3.617 5 O -0.418 6.418 6 N -0.371 5.371 7 C 0.024 3.976 8 C -0.056 4.056 9 C -0.067 4.067 10 C -0.136 4.136 11 C -0.134 4.134 12 C -0.138 4.138 13 C -0.134 4.134 14 C -0.127 4.127 15 C -0.177 4.177 16 C 0.030 3.970 17 H 0.130 0.870 18 F -0.184 7.184 19 C -0.192 4.192 20 C -0.167 4.167 21 C -0.104 4.104 22 C -0.138 4.138 23 O -0.336 6.336 24 Si 0.602 3.398 25 O -0.065 6.065 26 H 0.112 0.888 27 H 0.100 0.900 28 H 0.129 0.871 29 H 0.237 0.763 30 H 0.094 0.906 31 H 0.098 0.902 32 H 0.141 0.859 33 H 0.141 0.859 34 H 0.140 0.860 35 H 0.141 0.859 36 H 0.140 0.860 37 H 0.107 0.893 38 H 0.121 0.879 39 H 0.122 0.878 40 H 0.103 0.897 41 H 0.174 0.826 42 H 0.150 0.850 43 H 0.232 0.768 44 H -0.170 1.170 45 H -0.177 1.177 Dipole moment (debyes) X Y Z Total from point charges -0.200 -2.355 0.243 2.376 hybrid contribution 0.926 0.766 0.407 1.269 sum 0.726 -1.589 0.650 1.864 Atomic orbital electron populations 1.20701 0.83309 1.05415 1.04826 1.22915 0.94071 0.82833 0.95948 1.21090 0.93228 0.93737 1.17677 1.17126 0.85288 0.83668 0.75657 1.90782 1.16460 1.84017 1.50538 1.45628 1.09951 1.05586 1.75926 1.21129 0.94245 0.79151 1.03072 1.20767 0.95681 0.96614 0.92518 1.19374 0.94488 0.99537 0.93327 1.21060 0.94575 0.99923 0.98049 1.21174 0.99983 0.99714 0.92527 1.21226 0.95272 0.98737 0.98579 1.21187 0.95242 0.99150 0.97777 1.20969 0.99895 0.99873 0.91978 1.23641 1.04067 0.95303 0.94722 1.23081 0.94084 0.87917 0.91923 0.87036 1.92830 1.77196 1.66054 1.82354 1.23790 0.99910 0.99872 0.95648 1.22554 0.96424 0.93505 1.04246 1.22607 0.82937 0.95610 1.09263 1.24402 0.89650 1.07524 0.92227 1.86560 1.38171 1.93403 1.15436 0.94195 0.82075 0.74078 0.89405 1.83676 1.16343 1.35027 1.71434 0.88822 0.90013 0.87144 0.76339 0.90634 0.90169 0.85886 0.85915 0.86011 0.85911 0.86038 0.89324 0.87868 0.87798 0.89661 0.82576 0.85015 0.76792 1.17047 1.17685 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 0.03 9.88 36.00 0.36 0.39 16 2 C 0.10 0.13 7.37 -34.97 -0.26 -0.12 16 3 C -0.25 -0.44 6.31 -103.28 -0.65 -1.09 16 4 C 0.59 1.44 7.81 -12.53 -0.10 1.34 16 5 O -0.54 -2.70 14.84 5.27 0.08 -2.62 16 6 N -0.72 0.14 5.17 -61.40 -0.32 -0.18 16 7 C 0.15 -0.13 4.85 -4.04 -0.02 -0.15 16 8 C -0.06 0.11 0.63 -154.85 -0.10 0.01 16 9 C -0.07 0.05 4.67 -104.62 -0.49 -0.44 16 10 C -0.12 0.09 9.05 -39.59 -0.36 -0.27 16 11 C -0.12 0.03 10.05 -39.58 -0.40 -0.37 16 12 C -0.12 -0.01 10.05 -39.58 -0.40 -0.41 16 13 C -0.12 -0.02 10.05 -39.58 -0.40 -0.42 16 14 C -0.11 0.01 9.33 -39.58 -0.37 -0.36 16 15 C -0.14 0.25 7.00 -25.92 -0.18 0.07 16 16 C 0.07 -0.08 5.31 -25.92 -0.14 -0.21 16 17 H 0.11 -0.27 7.61 -51.93 -0.40 -0.67 16 18 F -0.20 -0.44 17.41 2.25 0.04 -0.40 16 19 C -0.15 0.33 5.97 -25.92 -0.15 0.17 16 20 C -0.15 -0.05 10.46 -37.46 -0.39 -0.44 16 21 C -0.06 -0.01 6.20 -35.74 -0.22 -0.23 16 22 C -0.03 0.03 2.98 36.00 0.11 0.14 16 23 O -0.53 0.69 12.86 -35.23 -0.45 0.23 16 24 Si 0.70 -0.99 32.08 -169.99 -5.45 -6.45 16 25 O -0.17 -0.16 8.89 7.63 0.07 -0.10 16 26 H 0.09 -0.13 8.14 -51.93 -0.42 -0.55 16 27 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 28 H 0.11 0.11 6.49 -51.93 -0.34 -0.23 16 29 H 0.40 -0.64 7.25 -40.82 -0.30 -0.93 16 30 H 0.08 -0.08 7.31 -51.93 -0.38 -0.46 16 31 H 0.08 0.01 7.95 -51.93 -0.41 -0.40 16 32 H 0.12 -0.28 6.44 -52.49 -0.34 -0.62 16 33 H 0.12 -0.21 8.06 -52.49 -0.42 -0.63 16 34 H 0.12 -0.16 8.06 -52.48 -0.42 -0.58 16 35 H 0.12 -0.14 8.06 -52.48 -0.42 -0.57 16 36 H 0.12 -0.13 8.06 -52.48 -0.42 -0.55 16 37 H 0.09 -0.24 8.10 -51.93 -0.42 -0.66 16 38 H 0.10 -0.11 8.10 -51.93 -0.42 -0.53 16 39 H 0.10 -0.19 6.83 -51.93 -0.35 -0.54 16 40 H 0.08 -0.24 7.75 -51.93 -0.40 -0.64 16 41 H 0.16 -0.22 7.74 -52.48 -0.41 -0.62 16 42 H 0.13 -0.21 7.96 -51.93 -0.41 -0.62 16 43 H 0.38 -1.89 8.70 45.56 0.40 -1.49 16 44 H -0.25 -0.26 7.11 56.52 0.40 0.14 16 45 H -0.25 -0.41 7.11 56.52 0.40 -0.01 16 LS Contribution 380.20 15.07 5.73 5.73 Total: 0.00 -7.56 380.20 -10.38 -17.94 By element: Atomic # 1 Polarization: -5.84 SS G_CDS: -5.91 Total: -11.75 kcal Atomic # 6 Polarization: 1.75 SS G_CDS: -4.16 Total: -2.41 kcal Atomic # 7 Polarization: 0.14 SS G_CDS: -0.32 Total: -0.18 kcal Atomic # 8 Polarization: -2.18 SS G_CDS: -0.31 Total: -2.49 kcal Atomic # 9 Polarization: -0.44 SS G_CDS: 0.04 Total: -0.40 kcal Atomic # 14 Polarization: -0.99 SS G_CDS: -5.45 Total: -6.45 kcal Total LS contribution 5.73 Total: 5.73 kcal Total: -7.56 -10.38 -17.94 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13458982_13308374.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -30.986 kcal (2) G-P(sol) polarization free energy of solvation -7.559 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -38.545 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.383 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.942 kcal (6) G-S(sol) free energy of system = (1) + (5) -48.928 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds