Wall clock time and date at job start Sat Mar 6 2021 21:28:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86302 * 109.46971 * 2 1 4 4 C 1.50699 * 109.47244 * 119.99867 * 2 1 3 5 5 C 1.38055 * 119.80659 * 65.02753 * 4 2 1 6 6 C 1.38708 * 120.08750 * 179.72235 * 5 4 2 7 7 O 1.35654 * 120.14958 * 180.27827 * 6 5 4 8 8 C 1.40139 * 119.69638 * 0.50028 * 6 5 4 9 9 C 1.47528 * 120.18845 * 179.77017 * 8 6 5 10 10 O 1.21588 * 120.00399 * 359.72872 * 9 8 6 11 11 N 1.34777 * 119.99910 * 179.72457 * 9 8 6 12 12 C 1.46506 * 119.99986 * 179.72451 * 11 9 8 13 13 C 1.52999 * 109.47184 * 174.30425 * 12 11 9 14 14 C 1.50709 * 112.84796 * 298.91310 * 13 12 11 15 15 C 1.38234 * 120.00122 * 113.65042 * 14 13 12 16 16 C 1.38230 * 119.99773 * 179.76199 * 15 14 13 17 17 C 1.38234 * 120.00311 * 0.51504 * 16 15 14 18 18 C 1.38237 * 119.99957 * 359.73660 * 17 16 15 19 19 C 1.38235 * 119.99754 * 293.92204 * 14 13 12 20 20 C 1.53776 * 113.61474 * 167.71849 * 13 12 11 21 21 C 1.54052 * 86.98171 * 270.83496 * 20 13 12 22 22 H 1.09003 * 113.61426 * 89.11736 * 21 20 13 23 23 F 1.39908 * 113.62157 * 220.02192 * 21 20 13 24 24 C 1.53780 * 87.08041 * 334.56669 * 21 20 13 25 25 C 1.39705 * 119.61708 * 359.50104 * 8 6 5 26 26 C 1.37787 * 119.90913 * 0.24631 * 25 8 6 27 27 H 0.96703 * 114.00183 * 299.99994 * 1 2 3 28 28 H 1.09001 * 109.47328 * 240.00608 * 2 1 3 29 29 H 1.48502 * 110.00304 * 178.68238 * 3 2 1 30 30 H 1.48497 * 110.00258 * 300.00159 * 3 2 1 31 31 H 1.08010 * 119.95130 * 359.97438 * 5 4 2 32 32 H 0.96704 * 113.99745 * 270.22810 * 7 6 5 33 33 H 0.97001 * 120.00043 * 0.02562 * 11 9 8 34 34 H 1.09002 * 109.47037 * 294.30703 * 12 11 9 35 35 H 1.08994 * 109.46900 * 54.30554 * 12 11 9 36 36 H 1.08003 * 119.99902 * 359.97438 * 15 14 13 37 37 H 1.08004 * 120.00263 * 180.22767 * 16 15 14 38 38 H 1.07996 * 120.00297 * 179.72284 * 17 16 15 39 39 H 1.08003 * 120.00460 * 179.97438 * 18 17 16 40 40 H 1.07997 * 120.00103 * 0.02562 * 19 14 13 41 41 H 1.08999 * 113.61741 * 25.42959 * 20 13 12 42 42 H 1.09000 * 113.61220 * 156.33897 * 20 13 12 43 43 H 1.08991 * 113.61606 * 270.88012 * 24 21 20 44 44 H 1.08998 * 113.61574 * 139.97222 * 24 21 20 45 45 H 1.08005 * 120.04448 * 180.26987 * 25 8 6 46 46 H 1.07998 * 119.85106 * 179.97438 * 26 25 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.6833 -2.0586 1.3938 6 6 2.1479 -2.7195 2.5214 7 8 1.9098 -4.0455 2.6805 8 6 2.8605 -2.0101 3.4976 9 6 3.3552 -2.7012 4.7035 10 8 3.1410 -3.8884 4.8549 11 7 4.0449 -2.0164 5.6373 12 6 4.5310 -2.7013 6.8377 13 6 5.3957 -1.7416 7.6575 14 6 6.6101 -1.2605 6.9056 15 6 6.7225 0.0717 6.5543 16 6 7.8386 0.5138 5.8690 17 6 8.8373 -0.3782 5.5257 18 6 8.7224 -1.7114 5.8725 19 6 7.6087 -2.1526 6.5625 20 6 5.7103 -2.2525 9.0734 21 6 4.4134 -1.5545 9.5253 22 1 3.5288 -2.1871 9.4519 23 9 4.5238 -0.9143 10.7644 24 6 4.5967 -0.6101 8.3255 25 6 3.1044 -0.6461 3.3196 26 6 2.6400 -0.0067 2.1908 27 1 -0.3934 0.4417 0.7651 28 1 1.7924 -0.5137 -0.8900 29 1 3.5346 1.7704 0.0321 30 1 1.5614 2.4680 -1.2084 31 1 1.1302 -2.6003 0.6407 32 1 1.0843 -4.2440 3.1435 33 1 4.2156 -1.0692 5.5167 34 1 3.6822 -3.0287 7.4381 35 1 5.1255 -3.5672 6.5463 36 1 5.9400 0.7677 6.8182 37 1 7.9283 1.5553 5.5976 38 1 9.7072 -0.0336 4.9863 39 1 9.5024 -2.4085 5.6040 40 1 7.5186 -3.1943 6.8328 41 1 5.6776 -3.3383 9.1632 42 1 6.6126 -1.8181 9.5038 43 1 5.1951 0.2723 8.5519 44 1 3.6656 -0.3711 7.8118 45 1 3.6566 -0.0937 4.0655 46 1 2.8287 1.0478 2.0543 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13458982_13422076.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:28:21 Heat of formation + Delta-G solvation = -72.997575 kcal Electronic energy + Delta-G solvation = -31909.169031 eV Core-core repulsion = 27452.770459 eV Total energy + Delta-G solvation = -4456.398573 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 358.141 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -48.56836 -41.91655 -41.29068 -39.78550 -38.87044 -38.38722 -37.18823 -35.30980 -32.95425 -32.09693 -31.97433 -31.15097 -28.96149 -27.41681 -27.02965 -25.14063 -23.98429 -23.45581 -23.22552 -22.62457 -21.53375 -20.31466 -19.33962 -18.74454 -18.39582 -18.23163 -17.62847 -17.25706 -16.78952 -16.63758 -16.51798 -16.26266 -16.13724 -15.95971 -15.73796 -15.60295 -15.53866 -15.25388 -15.03458 -14.73450 -14.43701 -14.42437 -14.28547 -13.88513 -13.73702 -13.66739 -13.51862 -13.21542 -12.99631 -12.61646 -12.54952 -12.34805 -12.31858 -12.20019 -11.90938 -11.71155 -11.46272 -11.41073 -10.87261 -10.57177 -10.24521 -10.08246 -9.93284 -9.82788 -9.75317 -5.16132 -0.44447 0.06304 0.30299 0.38601 1.13853 1.52034 1.74021 1.87259 1.95974 2.55435 2.71551 2.97782 3.05571 3.09294 3.26529 3.33723 3.36064 3.42011 3.49775 3.59168 3.69393 3.74460 3.93866 3.96103 3.98752 4.06624 4.14701 4.16830 4.28633 4.38226 4.45189 4.48472 4.49641 4.53938 4.55231 4.59701 4.65320 4.67473 4.81458 4.91918 4.96582 5.01197 5.07620 5.12443 5.15760 5.28299 5.46212 5.48849 5.52201 5.54103 5.96925 6.38503 6.42040 6.67926 7.17020 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.536 6.536 2 C -0.074 4.074 3 Si 0.690 3.310 4 C -0.076 4.076 5 C -0.129 4.129 6 C 0.174 3.826 7 O -0.476 6.476 8 C -0.164 4.164 9 C 0.560 3.440 10 O -0.517 6.517 11 N -0.723 5.723 12 C 0.147 3.853 13 C -0.056 4.056 14 C -0.068 4.068 15 C -0.120 4.120 16 C -0.116 4.116 17 C -0.120 4.120 18 C -0.115 4.115 19 C -0.108 4.108 20 C -0.140 4.140 21 C 0.065 3.935 22 H 0.112 0.888 23 F -0.204 7.204 24 C -0.154 4.154 25 C -0.064 4.064 26 C -0.134 4.134 27 H 0.380 0.620 28 H 0.118 0.882 29 H -0.255 1.255 30 H -0.252 1.252 31 H 0.140 0.860 32 H 0.398 0.602 33 H 0.400 0.600 34 H 0.075 0.925 35 H 0.080 0.920 36 H 0.124 0.876 37 H 0.123 0.877 38 H 0.122 0.878 39 H 0.123 0.877 40 H 0.121 0.879 41 H 0.088 0.912 42 H 0.103 0.897 43 H 0.104 0.896 44 H 0.085 0.915 45 H 0.133 0.867 46 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.490 4.970 1.556 5.231 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.341 6.341 2 C -0.185 4.185 3 Si 0.591 3.409 4 C -0.077 4.077 5 C -0.148 4.148 6 C 0.127 3.873 7 O -0.287 6.287 8 C -0.167 4.167 9 C 0.347 3.653 10 O -0.393 6.393 11 N -0.377 5.377 12 C 0.024 3.976 13 C -0.056 4.056 14 C -0.068 4.068 15 C -0.138 4.138 16 C -0.134 4.134 17 C -0.138 4.138 18 C -0.133 4.133 19 C -0.126 4.126 20 C -0.178 4.178 21 C 0.029 3.971 22 H 0.130 0.870 23 F -0.184 7.184 24 C -0.192 4.192 25 C -0.083 4.083 26 C -0.152 4.152 27 H 0.228 0.772 28 H 0.135 0.865 29 H -0.180 1.180 30 H -0.177 1.177 31 H 0.158 0.842 32 H 0.257 0.743 33 H 0.235 0.765 34 H 0.093 0.907 35 H 0.099 0.901 36 H 0.142 0.858 37 H 0.141 0.859 38 H 0.140 0.860 39 H 0.141 0.859 40 H 0.139 0.861 41 H 0.107 0.893 42 H 0.121 0.879 43 H 0.122 0.878 44 H 0.104 0.896 45 H 0.150 0.850 46 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges 0.458 4.309 0.445 4.356 hybrid contribution -0.038 -0.105 0.046 0.121 sum 0.420 4.204 0.491 4.254 Atomic orbital electron populations 1.86542 1.16672 1.81676 1.49260 1.25185 0.85555 1.10452 0.97264 0.94798 0.81134 0.77472 0.87499 1.20442 0.96752 0.94210 0.96261 1.21354 1.00953 0.93898 0.98550 1.18506 0.93721 0.83455 0.91633 1.84766 1.46188 1.17851 1.79937 1.20394 1.05633 0.94350 0.96347 1.18004 0.78328 0.86606 0.82376 1.90844 1.56508 1.14455 1.77532 1.45768 1.57142 1.13447 1.21324 1.21128 0.97090 0.94238 0.85168 1.20779 0.93893 0.96977 0.93962 1.19375 0.94837 0.93747 0.98848 1.21061 0.98511 0.95004 0.99235 1.21171 0.94004 0.99803 0.98410 1.21232 0.99109 0.93603 0.99836 1.21198 0.97910 0.96037 0.98145 1.20975 0.93735 0.99503 0.98405 1.23693 0.98681 1.02264 0.93141 1.23142 0.99836 0.94973 0.79106 0.87023 1.92833 1.97270 1.83215 1.45109 1.23790 1.01344 0.97987 0.96037 1.21134 0.97225 0.92641 0.97317 1.20920 1.00041 0.99803 0.94393 0.77245 0.86474 1.18012 1.17714 0.84198 0.74327 0.76462 0.90653 0.90126 0.85813 0.85867 0.86000 0.85912 0.86066 0.89326 0.87860 0.87765 0.89634 0.84973 0.84677 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.52 12.83 -35.23 -0.45 0.07 16 2 C -0.07 0.10 2.79 36.01 0.10 0.20 16 3 Si 0.69 -1.62 29.78 -169.99 -5.06 -6.68 16 4 C -0.08 0.07 5.35 -104.57 -0.56 -0.48 16 5 C -0.13 -0.06 9.60 -39.47 -0.38 -0.44 16 6 C 0.17 0.28 6.72 -38.69 -0.26 0.02 16 7 O -0.48 -1.24 11.58 -40.54 -0.47 -1.71 16 8 C -0.16 -0.13 5.89 -104.85 -0.62 -0.75 16 9 C 0.56 1.11 7.76 -12.47 -0.10 1.02 16 10 O -0.52 -2.88 15.15 -16.59 -0.25 -3.13 16 11 N -0.72 0.76 5.25 -61.35 -0.32 0.44 16 12 C 0.15 -0.20 4.82 -4.04 -0.02 -0.22 16 13 C -0.06 0.14 0.63 -154.85 -0.10 0.04 16 14 C -0.07 0.09 4.45 -104.62 -0.47 -0.37 16 15 C -0.12 0.21 9.05 -39.59 -0.36 -0.15 16 16 C -0.12 0.13 10.05 -39.59 -0.40 -0.27 16 17 C -0.12 0.06 10.05 -39.58 -0.40 -0.34 16 18 C -0.11 0.02 10.05 -39.58 -0.40 -0.38 16 19 C -0.11 0.04 9.41 -39.58 -0.37 -0.33 16 20 C -0.14 0.31 7.02 -25.78 -0.18 0.13 16 21 C 0.07 -0.12 5.32 -25.78 -0.14 -0.25 16 22 H 0.11 -0.34 7.59 -51.93 -0.39 -0.74 16 23 F -0.20 -0.33 17.41 2.25 0.04 -0.29 16 24 C -0.15 0.46 6.12 -25.92 -0.16 0.30 16 25 C -0.06 0.12 9.53 -39.20 -0.37 -0.26 16 26 C -0.13 0.30 8.64 -39.63 -0.34 -0.05 16 27 H 0.38 -1.91 8.70 45.56 0.40 -1.51 16 28 H 0.12 -0.09 7.96 -51.93 -0.41 -0.50 16 29 H -0.26 0.00 7.11 56.52 0.40 0.40 16 30 H -0.25 -0.29 7.11 56.52 0.40 0.11 16 31 H 0.14 0.03 8.06 -52.48 -0.42 -0.39 16 32 H 0.40 -0.47 9.06 45.56 0.41 -0.06 16 33 H 0.40 -1.21 6.28 -40.82 -0.26 -1.47 16 34 H 0.08 -0.12 7.30 -51.93 -0.38 -0.50 16 35 H 0.08 0.00 8.04 -51.93 -0.42 -0.42 16 36 H 0.12 -0.44 6.44 -52.48 -0.34 -0.78 16 37 H 0.12 -0.33 8.06 -52.48 -0.42 -0.75 16 38 H 0.12 -0.21 8.06 -52.49 -0.42 -0.64 16 39 H 0.12 -0.16 8.06 -52.48 -0.42 -0.58 16 40 H 0.12 -0.14 8.06 -52.49 -0.42 -0.56 16 41 H 0.09 -0.26 8.10 -51.93 -0.42 -0.68 16 42 H 0.10 -0.15 8.09 -51.93 -0.42 -0.57 16 43 H 0.10 -0.29 6.82 -51.93 -0.35 -0.64 16 44 H 0.09 -0.34 8.10 -51.93 -0.42 -0.76 16 45 H 0.13 -0.60 6.40 -52.48 -0.34 -0.93 16 46 H 0.14 -0.61 4.88 -52.49 -0.26 -0.87 16 LS Contribution 383.53 15.07 5.78 5.78 Total: 0.00 -9.79 383.53 -11.16 -20.95 By element: Atomic # 1 Polarization: -7.95 SS G_CDS: -4.91 Total: -12.86 kcal Atomic # 6 Polarization: 2.94 SS G_CDS: -5.51 Total: -2.57 kcal Atomic # 7 Polarization: 0.76 SS G_CDS: -0.32 Total: 0.44 kcal Atomic # 8 Polarization: -3.60 SS G_CDS: -1.17 Total: -4.78 kcal Atomic # 9 Polarization: -0.33 SS G_CDS: 0.04 Total: -0.29 kcal Atomic # 14 Polarization: -1.62 SS G_CDS: -5.06 Total: -6.68 kcal Total LS contribution 5.78 Total: 5.78 kcal Total: -9.79 -11.16 -20.95 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13458982_13422076.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -52.046 kcal (2) G-P(sol) polarization free energy of solvation -9.793 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -61.839 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.159 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.952 kcal (6) G-S(sol) free energy of system = (1) + (5) -72.998 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds