Wall clock time and date at job start Sat Mar 6 2021 21:28:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50707 * 1 3 3 C 1.37785 * 119.85202 * 2 1 4 4 C 1.39702 * 119.90966 * 180.29847 * 3 2 1 5 5 C 1.47538 * 120.19539 * 179.69817 * 4 3 2 6 6 O 1.21587 * 120.00267 * 179.72641 * 5 4 3 7 7 N 1.34778 * 119.99778 * 359.72530 * 5 4 3 8 8 C 1.46494 * 119.99805 * 180.02562 * 7 5 4 9 9 C 1.53005 * 109.47069 * 179.03381 * 8 7 5 10 10 C 1.50702 * 112.85070 * 66.13899 * 9 8 7 11 11 C 1.38232 * 120.00165 * 245.83204 * 10 9 8 12 12 C 1.38237 * 119.99995 * 179.74405 * 11 10 9 13 13 C 1.38227 * 119.99666 * 0.52673 * 12 11 10 14 14 C 1.38232 * 120.00613 * 359.75266 * 13 12 11 15 15 C 1.38238 * 119.99723 * 66.10725 * 10 9 8 16 16 C 1.53784 * 113.61093 * 294.94484 * 9 8 7 17 17 C 1.53785 * 87.08069 * 270.88255 * 16 9 8 18 18 H 1.09001 * 113.61076 * 89.20161 * 17 16 9 19 19 F 1.39894 * 113.61344 * 220.02341 * 17 16 9 20 20 C 1.53777 * 113.61266 * 197.44795 * 9 8 7 21 21 C 1.40145 * 119.61453 * 359.42623 * 4 3 2 22 22 O 1.35650 * 120.15134 * 180.29880 * 21 4 3 23 23 C 1.38704 * 119.69809 * 0.27447 * 21 4 3 24 24 C 1.50698 * 119.95775 * 179.97438 * 23 21 4 25 25 O 1.42895 * 109.47865 * 74.99875 * 24 23 21 26 26 Si 1.86303 * 109.47412 * 195.00134 * 24 23 21 27 27 C 1.38055 * 120.08865 * 359.97438 * 23 21 4 28 28 H 1.08997 * 109.47063 * 270.30368 * 1 2 3 29 29 H 1.09002 * 109.46909 * 30.30151 * 1 2 3 30 30 H 1.09001 * 109.47288 * 150.30171 * 1 2 3 31 31 H 1.08004 * 120.04836 * 0.02562 * 3 2 1 32 32 H 0.97003 * 119.99993 * 0.02562 * 7 5 4 33 33 H 1.09004 * 109.47230 * 299.02835 * 8 7 5 34 34 H 1.09000 * 109.47397 * 59.03419 * 8 7 5 35 35 H 1.08002 * 119.99674 * 0.02562 * 11 10 9 36 36 H 1.07996 * 119.99489 * 180.29859 * 12 11 10 37 37 H 1.08007 * 119.99789 * 179.76684 * 13 12 11 38 38 H 1.08002 * 120.00743 * 179.97438 * 14 13 12 39 39 H 1.07995 * 120.00024 * 359.97438 * 15 10 9 40 40 H 1.08995 * 113.61251 * 25.43242 * 16 9 8 41 41 H 1.09003 * 113.61191 * 156.25314 * 16 9 8 42 42 H 1.09004 * 113.61480 * 203.66336 * 20 9 8 43 43 H 1.08996 * 113.62073 * 334.56488 * 20 9 8 44 44 H 0.96701 * 114.00255 * 89.99686 * 22 21 4 45 45 H 1.09009 * 109.46935 * 314.99478 * 24 23 21 46 46 H 0.96693 * 114.00959 * 180.02562 * 25 24 23 47 47 H 1.48493 * 110.00225 * 178.67999 * 26 24 23 48 48 H 1.48505 * 109.99616 * 299.99556 * 26 24 23 49 49 H 1.08001 * 119.80864 * 179.97438 * 27 23 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.1929 1.1950 0.0000 4 6 3.5899 1.1964 -0.0063 5 6 4.3306 2.4724 -0.0131 6 8 5.5465 2.4695 -0.0135 7 7 3.6595 3.6412 -0.0188 8 6 4.3950 4.9081 -0.0260 9 6 3.4036 6.0731 -0.0558 10 6 2.5790 6.1722 1.2017 11 6 1.2147 5.9556 1.1525 12 6 0.4591 6.0413 2.3069 13 6 1.0663 6.3542 3.5086 14 6 2.4298 6.5764 3.5570 15 6 3.1863 6.4852 2.4035 16 6 2.5696 6.1394 -1.3461 17 6 3.6926 7.0103 -1.9339 18 1 4.4771 6.4366 -2.4274 19 9 3.2267 8.0752 -2.7124 20 6 4.0341 7.4075 -0.4880 21 6 4.2837 -0.0212 -0.0004 22 8 5.6402 -0.0325 -0.0003 23 6 3.5771 -1.2147 0.0059 24 6 4.3172 -2.5274 0.0117 25 8 4.8559 -2.7650 1.3137 26 14 3.1440 -3.9039 -0.4355 27 6 2.1966 -1.2017 0.0068 28 1 -0.3633 0.0054 1.0276 29 1 -0.3633 0.8873 -0.5185 30 1 -0.3634 -0.8927 -0.5091 31 1 1.6513 2.1294 0.0004 32 1 2.6895 3.6434 -0.0180 33 1 5.0094 4.9767 0.8717 34 1 5.0340 4.9522 -0.9079 35 1 0.7397 5.7150 0.2128 36 1 -0.6061 5.8673 2.2692 37 1 0.4754 6.4248 4.4100 38 1 2.9042 6.8213 4.4958 39 1 4.2516 6.6584 2.4413 40 1 2.4581 5.1762 -1.8439 41 1 1.6230 6.6667 -1.2276 42 1 3.4885 8.2827 -0.1352 43 1 5.1048 7.4680 -0.2931 44 1 6.0335 -0.0314 0.8831 45 1 5.1281 -2.4905 -0.7159 46 1 5.3469 -3.5944 1.3910 47 1 3.8687 -5.1996 -0.4644 48 1 2.0338 -3.9647 0.5489 49 1 1.6509 -2.1337 0.0113 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13458982_13422088.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:28:25 Heat of formation + Delta-G solvation = -76.199702 kcal Electronic energy + Delta-G solvation = -34306.094396 eV Core-core repulsion = 29694.019349 eV Total energy + Delta-G solvation = -4612.075046 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 372.157 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -48.54160 -41.90589 -41.32045 -39.77079 -38.81671 -37.99821 -37.66968 -35.26827 -33.25507 -32.91798 -32.09441 -31.96484 -28.71692 -27.63991 -27.25095 -26.76125 -25.46156 -24.33050 -23.32326 -22.61243 -21.86343 -21.32662 -20.09889 -19.39041 -18.63412 -18.51510 -18.13703 -17.73598 -17.42313 -16.77173 -16.65810 -16.52465 -16.08941 -16.03396 -15.95979 -15.62083 -15.54443 -15.35905 -15.11379 -14.99088 -14.60077 -14.54031 -14.39913 -14.33688 -14.10638 -13.81569 -13.71083 -13.60333 -13.45552 -13.24078 -13.07837 -12.62794 -12.57548 -12.54579 -12.45509 -12.30068 -11.89799 -11.83210 -11.64499 -11.43193 -11.38351 -10.78903 -10.47690 -10.20752 -10.01807 -9.92011 -9.74286 -9.49866 -5.03723 -0.30432 0.07122 0.31251 0.39394 1.19603 1.50949 1.77919 1.86103 2.01612 2.57781 2.72650 3.01374 3.12099 3.18533 3.25600 3.30082 3.41309 3.50884 3.59518 3.62303 3.75084 3.77449 3.97197 3.99608 4.05690 4.07645 4.10139 4.15394 4.27681 4.40576 4.41839 4.48570 4.51545 4.53966 4.56665 4.57351 4.58766 4.62835 4.70743 4.74274 4.84567 4.94699 4.97490 4.98059 5.02164 5.15201 5.20367 5.32691 5.33527 5.47157 5.53414 5.54831 5.58889 5.97798 6.37295 6.43843 6.78054 7.22884 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.116 4.116 2 C -0.097 4.097 3 C -0.067 4.067 4 C -0.164 4.164 5 C 0.561 3.439 6 O -0.517 6.517 7 N -0.724 5.724 8 C 0.148 3.852 9 C -0.055 4.055 10 C -0.068 4.068 11 C -0.120 4.120 12 C -0.116 4.116 13 C -0.120 4.120 14 C -0.115 4.115 15 C -0.109 4.109 16 C -0.154 4.154 17 C 0.066 3.934 18 H 0.112 0.888 19 F -0.204 7.204 20 C -0.139 4.139 21 C 0.191 3.809 22 O -0.473 6.473 23 C -0.104 4.104 24 C -0.072 4.072 25 O -0.537 6.537 26 Si 0.689 3.311 27 C -0.075 4.075 28 H 0.074 0.926 29 H 0.071 0.929 30 H 0.072 0.928 31 H 0.130 0.870 32 H 0.400 0.600 33 H 0.077 0.923 34 H 0.078 0.922 35 H 0.124 0.876 36 H 0.123 0.877 37 H 0.122 0.878 38 H 0.123 0.877 39 H 0.122 0.878 40 H 0.085 0.915 41 H 0.104 0.896 42 H 0.103 0.897 43 H 0.088 0.912 44 H 0.399 0.601 45 H 0.082 0.918 46 H 0.382 0.618 47 H -0.259 1.259 48 H -0.253 1.253 49 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.595 -1.123 0.124 4.732 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.173 4.173 2 C -0.097 4.097 3 C -0.086 4.086 4 C -0.168 4.168 5 C 0.348 3.652 6 O -0.393 6.393 7 N -0.378 5.378 8 C 0.024 3.976 9 C -0.056 4.056 10 C -0.068 4.068 11 C -0.138 4.138 12 C -0.134 4.134 13 C -0.138 4.138 14 C -0.133 4.133 15 C -0.127 4.127 16 C -0.192 4.192 17 C 0.030 3.970 18 H 0.130 0.870 19 F -0.184 7.184 20 C -0.177 4.177 21 C 0.144 3.856 22 O -0.284 6.284 23 C -0.105 4.105 24 C -0.182 4.182 25 O -0.345 6.345 26 Si 0.590 3.410 27 C -0.093 4.093 28 H 0.093 0.907 29 H 0.090 0.910 30 H 0.091 0.909 31 H 0.147 0.853 32 H 0.235 0.765 33 H 0.096 0.904 34 H 0.096 0.904 35 H 0.142 0.858 36 H 0.141 0.859 37 H 0.140 0.860 38 H 0.141 0.859 39 H 0.140 0.860 40 H 0.104 0.896 41 H 0.122 0.878 42 H 0.121 0.879 43 H 0.107 0.893 44 H 0.257 0.743 45 H 0.100 0.900 46 H 0.230 0.770 47 H -0.183 1.183 48 H -0.178 1.178 49 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -4.402 -1.263 -0.132 4.582 hybrid contribution 0.466 -0.175 1.364 1.452 sum -3.936 -1.438 1.232 4.368 Atomic orbital electron populations 1.20833 0.89988 1.03538 1.02940 1.19764 0.96772 0.92160 1.00996 1.21102 0.92129 0.98230 0.97094 1.20307 0.93896 0.93308 1.09247 1.17985 0.87251 0.83198 0.76721 1.90839 1.12944 1.87269 1.48279 1.45775 1.10409 1.05234 1.76372 1.21122 0.92770 0.80426 1.03268 1.20767 0.96214 0.95897 0.92713 1.19392 0.93549 1.00369 0.93527 1.21070 0.93200 1.00886 0.98597 1.21172 1.00003 0.99562 0.92638 1.21229 0.95012 0.99420 0.98132 1.21194 0.94204 0.99570 0.98354 1.20975 1.00012 0.99641 0.92049 1.23793 0.98872 1.01565 0.94977 1.23085 0.97713 0.86380 0.89848 0.87008 1.92828 1.89968 1.58507 1.77138 1.23643 1.02838 0.96894 0.94374 1.18179 0.83927 0.89682 0.93858 1.84662 1.14239 1.95884 1.33665 1.19541 0.93346 0.93531 1.04084 1.24708 1.03871 1.01428 0.88155 1.86538 1.73537 1.44659 1.29727 0.94922 0.80100 0.76557 0.89461 1.21115 0.92770 0.98545 0.96898 0.90735 0.90985 0.90860 0.85255 0.76479 0.90435 0.90427 0.85832 0.85869 0.85989 0.85902 0.86033 0.89633 0.87776 0.87861 0.89335 0.74264 0.89967 0.77017 1.18349 1.17812 0.84648 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.35 10.00 36.01 0.36 0.71 16 2 C -0.10 0.07 5.87 -104.67 -0.61 -0.55 16 3 C -0.07 0.03 9.18 -39.20 -0.36 -0.33 16 4 C -0.16 -0.33 5.89 -104.84 -0.62 -0.95 16 5 C 0.56 1.62 7.76 -12.47 -0.10 1.53 16 6 O -0.52 -3.28 15.16 -16.59 -0.25 -3.53 16 7 N -0.72 0.18 5.11 -61.35 -0.31 -0.14 16 8 C 0.15 -0.11 4.85 -4.04 -0.02 -0.13 16 9 C -0.06 0.11 0.63 -154.84 -0.10 0.02 16 10 C -0.07 0.07 4.61 -104.62 -0.48 -0.41 16 11 C -0.12 0.17 9.05 -39.58 -0.36 -0.19 16 12 C -0.12 0.11 10.05 -39.59 -0.40 -0.29 16 13 C -0.12 0.05 10.05 -39.59 -0.40 -0.34 16 14 C -0.12 0.03 10.05 -39.58 -0.40 -0.37 16 15 C -0.11 0.04 9.33 -39.58 -0.37 -0.33 16 16 C -0.15 0.35 6.03 -25.91 -0.16 0.19 16 17 C 0.07 -0.07 5.32 -25.91 -0.14 -0.21 16 18 H 0.11 -0.24 7.62 -51.93 -0.40 -0.64 16 19 F -0.20 -0.44 17.41 2.25 0.04 -0.40 16 20 C -0.14 0.25 7.00 -25.92 -0.18 0.07 16 21 C 0.19 0.56 6.69 -38.69 -0.26 0.30 16 22 O -0.47 -1.76 10.91 -40.53 -0.44 -2.20 16 23 C -0.10 -0.16 5.30 -104.52 -0.55 -0.72 16 24 C -0.07 -0.03 2.37 36.00 0.09 0.06 16 25 O -0.54 -0.52 12.86 -35.23 -0.45 -0.97 16 26 Si 0.69 -0.77 30.19 -169.99 -5.13 -5.91 16 27 C -0.08 -0.01 8.30 -39.53 -0.33 -0.34 16 28 H 0.07 -0.23 8.14 -51.93 -0.42 -0.66 16 29 H 0.07 -0.29 8.08 -51.93 -0.42 -0.71 16 30 H 0.07 -0.27 8.08 -51.93 -0.42 -0.69 16 31 H 0.13 -0.39 6.40 -52.48 -0.34 -0.73 16 32 H 0.40 -0.85 6.24 -40.82 -0.25 -1.11 16 33 H 0.08 0.01 7.95 -51.93 -0.41 -0.40 16 34 H 0.08 -0.04 7.31 -51.93 -0.38 -0.42 16 35 H 0.12 -0.38 6.41 -52.49 -0.34 -0.72 16 36 H 0.12 -0.31 8.06 -52.49 -0.42 -0.73 16 37 H 0.12 -0.22 8.06 -52.48 -0.42 -0.64 16 38 H 0.12 -0.18 8.06 -52.49 -0.42 -0.60 16 39 H 0.12 -0.15 8.06 -52.49 -0.42 -0.58 16 40 H 0.09 -0.25 7.89 -51.93 -0.41 -0.66 16 41 H 0.10 -0.23 6.79 -51.93 -0.35 -0.58 16 42 H 0.10 -0.12 8.10 -51.93 -0.42 -0.54 16 43 H 0.09 -0.23 8.10 -51.93 -0.42 -0.65 16 44 H 0.40 0.55 9.06 45.56 0.41 0.96 16 45 H 0.08 0.00 7.83 -51.92 -0.41 -0.40 16 46 H 0.38 -1.07 8.74 45.56 0.40 -0.67 16 47 H -0.26 -0.24 7.11 56.52 0.40 0.16 16 48 H -0.25 -0.29 6.75 56.52 0.38 0.10 16 49 H 0.14 -0.17 4.87 -52.49 -0.26 -0.43 16 LS Contribution 403.64 15.07 6.08 6.08 Total: 0.00 -9.09 403.64 -11.59 -20.68 By element: Atomic # 1 Polarization: -5.59 SS G_CDS: -5.74 Total: -11.33 kcal Atomic # 6 Polarization: 3.10 SS G_CDS: -5.38 Total: -2.28 kcal Atomic # 7 Polarization: 0.18 SS G_CDS: -0.31 Total: -0.14 kcal Atomic # 8 Polarization: -5.56 SS G_CDS: -1.15 Total: -6.70 kcal Atomic # 9 Polarization: -0.44 SS G_CDS: 0.04 Total: -0.40 kcal Atomic # 14 Polarization: -0.77 SS G_CDS: -5.13 Total: -5.91 kcal Total LS contribution 6.08 Total: 6.08 kcal Total: -9.09 -11.59 -20.68 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13458982_13422088.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -55.523 kcal (2) G-P(sol) polarization free energy of solvation -9.087 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -64.610 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.590 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.676 kcal (6) G-S(sol) free energy of system = (1) + (5) -76.200 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds