Wall clock time and date at job start Sat Mar 6 2021 21:28:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50707 * 1 3 3 C 1.37785 * 119.85202 * 2 1 4 4 C 1.39702 * 119.90966 * 180.29847 * 3 2 1 5 5 C 1.47538 * 120.19539 * 179.69817 * 4 3 2 6 6 O 1.21587 * 120.00267 * 179.72641 * 5 4 3 7 7 N 1.34778 * 119.99778 * 359.72530 * 5 4 3 8 8 C 1.46494 * 119.99805 * 180.02562 * 7 5 4 9 9 C 1.53005 * 109.47069 * 179.03381 * 8 7 5 10 10 C 1.50702 * 112.85070 * 66.13899 * 9 8 7 11 11 C 1.38232 * 120.00165 * 245.83204 * 10 9 8 12 12 C 1.38237 * 119.99995 * 179.74405 * 11 10 9 13 13 C 1.38227 * 119.99666 * 0.52673 * 12 11 10 14 14 C 1.38232 * 120.00613 * 359.75266 * 13 12 11 15 15 C 1.38238 * 119.99723 * 66.10725 * 10 9 8 16 16 C 1.53784 * 113.61093 * 294.94484 * 9 8 7 17 17 C 1.53785 * 87.08069 * 270.88255 * 16 9 8 18 18 H 1.09001 * 113.61076 * 89.20161 * 17 16 9 19 19 F 1.39894 * 113.61344 * 220.02341 * 17 16 9 20 20 C 1.53777 * 113.61266 * 197.44795 * 9 8 7 21 21 C 1.40145 * 119.61453 * 359.42623 * 4 3 2 22 22 O 1.35650 * 120.15134 * 180.29880 * 21 4 3 23 23 C 1.38704 * 119.69809 * 0.27447 * 21 4 3 24 24 C 1.50698 * 119.95775 * 179.97438 * 23 21 4 25 25 O 1.42895 * 109.47865 * 74.99875 * 24 23 21 26 26 Si 1.86303 * 109.47412 * 195.00134 * 24 23 21 27 27 C 1.38055 * 120.08865 * 359.97438 * 23 21 4 28 28 H 1.08997 * 109.47063 * 270.30368 * 1 2 3 29 29 H 1.09002 * 109.46909 * 30.30151 * 1 2 3 30 30 H 1.09001 * 109.47288 * 150.30171 * 1 2 3 31 31 H 1.08004 * 120.04836 * 0.02562 * 3 2 1 32 32 H 0.97003 * 119.99993 * 0.02562 * 7 5 4 33 33 H 1.09004 * 109.47230 * 299.02835 * 8 7 5 34 34 H 1.09000 * 109.47397 * 59.03419 * 8 7 5 35 35 H 1.08002 * 119.99674 * 0.02562 * 11 10 9 36 36 H 1.07996 * 119.99489 * 180.29859 * 12 11 10 37 37 H 1.08007 * 119.99789 * 179.76684 * 13 12 11 38 38 H 1.08002 * 120.00743 * 179.97438 * 14 13 12 39 39 H 1.07995 * 120.00024 * 359.97438 * 15 10 9 40 40 H 1.08995 * 113.61251 * 25.43242 * 16 9 8 41 41 H 1.09003 * 113.61191 * 156.25314 * 16 9 8 42 42 H 1.09004 * 113.61480 * 203.66336 * 20 9 8 43 43 H 1.08996 * 113.62073 * 334.56488 * 20 9 8 44 44 H 0.96701 * 114.00255 * 89.99686 * 22 21 4 45 45 H 1.09009 * 109.46935 * 314.99478 * 24 23 21 46 46 H 0.96693 * 114.00959 * 180.02562 * 25 24 23 47 47 H 1.48493 * 110.00225 * 178.67999 * 26 24 23 48 48 H 1.48505 * 109.99616 * 299.99556 * 26 24 23 49 49 H 1.08001 * 119.80864 * 179.97438 * 27 23 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.1929 1.1950 0.0000 4 6 3.5899 1.1964 -0.0063 5 6 4.3306 2.4724 -0.0131 6 8 5.5465 2.4695 -0.0135 7 7 3.6595 3.6412 -0.0188 8 6 4.3950 4.9081 -0.0260 9 6 3.4036 6.0731 -0.0558 10 6 2.5790 6.1722 1.2017 11 6 1.2147 5.9556 1.1525 12 6 0.4591 6.0413 2.3069 13 6 1.0663 6.3542 3.5086 14 6 2.4298 6.5764 3.5570 15 6 3.1863 6.4852 2.4035 16 6 2.5696 6.1394 -1.3461 17 6 3.6926 7.0103 -1.9339 18 1 4.4771 6.4366 -2.4274 19 9 3.2267 8.0752 -2.7124 20 6 4.0341 7.4075 -0.4880 21 6 4.2837 -0.0212 -0.0004 22 8 5.6402 -0.0325 -0.0003 23 6 3.5771 -1.2147 0.0059 24 6 4.3172 -2.5274 0.0117 25 8 4.8559 -2.7650 1.3137 26 14 3.1440 -3.9039 -0.4355 27 6 2.1966 -1.2017 0.0068 28 1 -0.3633 0.0054 1.0276 29 1 -0.3633 0.8873 -0.5185 30 1 -0.3634 -0.8927 -0.5091 31 1 1.6513 2.1294 0.0004 32 1 2.6895 3.6434 -0.0180 33 1 5.0094 4.9767 0.8717 34 1 5.0340 4.9522 -0.9079 35 1 0.7397 5.7150 0.2128 36 1 -0.6061 5.8673 2.2692 37 1 0.4754 6.4248 4.4100 38 1 2.9042 6.8213 4.4958 39 1 4.2516 6.6584 2.4413 40 1 2.4581 5.1762 -1.8439 41 1 1.6230 6.6667 -1.2276 42 1 3.4885 8.2827 -0.1352 43 1 5.1048 7.4680 -0.2931 44 1 6.0335 -0.0314 0.8831 45 1 5.1281 -2.4905 -0.7159 46 1 5.3469 -3.5944 1.3910 47 1 3.8687 -5.1996 -0.4644 48 1 2.0338 -3.9647 0.5489 49 1 1.6509 -2.1337 0.0113 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13458982_13422088.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:28:24 Heat of formation + Delta-G solvation = -73.384492 kcal Electronic energy + Delta-G solvation = -34305.972319 eV Core-core repulsion = 29694.019349 eV Total energy + Delta-G solvation = -4611.952970 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 372.157 amu Computer time = 1.29 seconds Orbital eigenvalues (eV) -48.58374 -41.93230 -41.28727 -39.86845 -38.74429 -38.06314 -37.73330 -35.39951 -33.24322 -32.90647 -31.99602 -31.85220 -28.70487 -27.52694 -27.12018 -26.76040 -25.42818 -24.34560 -23.21631 -22.51691 -21.85536 -21.44076 -20.05282 -19.45557 -18.64662 -18.46968 -18.17832 -17.73025 -17.38051 -16.86066 -16.57612 -16.55668 -16.15763 -16.04836 -15.99929 -15.55758 -15.49133 -15.37443 -15.13711 -14.96684 -14.54076 -14.49505 -14.33393 -14.27859 -14.09386 -13.78446 -13.66035 -13.51730 -13.37334 -13.17804 -12.96411 -12.55914 -12.50041 -12.46263 -12.42323 -12.20011 -11.87365 -11.80589 -11.74175 -11.34408 -11.26327 -10.96594 -10.49491 -10.31881 -10.03960 -9.82570 -9.65144 -9.51117 -4.95691 -0.36117 0.05292 0.40436 0.49081 1.23986 1.55983 1.69138 1.87341 1.96939 2.51250 2.81762 3.12958 3.16525 3.22751 3.27502 3.41508 3.48924 3.59593 3.62918 3.67137 3.81848 3.86492 4.10189 4.10809 4.12424 4.14390 4.19947 4.28602 4.32805 4.47130 4.51835 4.60443 4.60824 4.64007 4.66036 4.69417 4.71511 4.81393 4.85385 4.88950 4.94411 4.96713 5.09135 5.14515 5.17716 5.23330 5.26859 5.27839 5.41284 5.57628 5.63658 5.64300 5.65892 6.09464 6.39599 6.52036 6.66170 7.10493 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.117 4.117 2 C -0.093 4.093 3 C -0.061 4.061 4 C -0.179 4.179 5 C 0.558 3.442 6 O -0.561 6.561 7 N -0.708 5.708 8 C 0.148 3.852 9 C -0.041 4.041 10 C -0.072 4.072 11 C -0.121 4.121 12 C -0.123 4.123 13 C -0.133 4.133 14 C -0.131 4.131 15 C -0.123 4.123 16 C -0.146 4.146 17 C 0.056 3.944 18 H 0.121 0.879 19 F -0.223 7.223 20 C -0.138 4.138 21 C 0.162 3.838 22 O -0.490 6.490 23 C -0.117 4.117 24 C -0.088 4.088 25 O -0.556 6.556 26 Si 0.774 3.226 27 C -0.080 4.080 28 H 0.079 0.921 29 H 0.088 0.912 30 H 0.082 0.918 31 H 0.158 0.842 32 H 0.411 0.589 33 H 0.067 0.933 34 H 0.076 0.924 35 H 0.144 0.856 36 H 0.140 0.860 37 H 0.131 0.869 38 H 0.128 0.872 39 H 0.123 0.877 40 H 0.097 0.903 41 H 0.108 0.892 42 H 0.098 0.902 43 H 0.094 0.906 44 H 0.401 0.599 45 H 0.079 0.921 46 H 0.395 0.605 47 H -0.286 1.286 48 H -0.279 1.279 49 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.876 -1.292 -0.369 7.006 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C -0.093 4.093 3 C -0.080 4.080 4 C -0.183 4.183 5 C 0.346 3.654 6 O -0.441 6.441 7 N -0.361 5.361 8 C 0.025 3.975 9 C -0.042 4.042 10 C -0.073 4.073 11 C -0.139 4.139 12 C -0.141 4.141 13 C -0.151 4.151 14 C -0.149 4.149 15 C -0.141 4.141 16 C -0.184 4.184 17 C 0.020 3.980 18 H 0.139 0.861 19 F -0.204 7.204 20 C -0.176 4.176 21 C 0.116 3.884 22 O -0.302 6.302 23 C -0.118 4.118 24 C -0.195 4.195 25 O -0.366 6.366 26 Si 0.678 3.322 27 C -0.098 4.098 28 H 0.098 0.902 29 H 0.107 0.893 30 H 0.101 0.899 31 H 0.175 0.825 32 H 0.248 0.752 33 H 0.085 0.915 34 H 0.094 0.906 35 H 0.161 0.839 36 H 0.158 0.842 37 H 0.149 0.851 38 H 0.146 0.854 39 H 0.141 0.859 40 H 0.115 0.885 41 H 0.127 0.873 42 H 0.116 0.884 43 H 0.113 0.887 44 H 0.260 0.740 45 H 0.097 0.903 46 H 0.245 0.755 47 H -0.213 1.213 48 H -0.206 1.206 49 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges -6.702 -1.400 -0.628 6.876 hybrid contribution 1.178 -0.107 1.572 1.967 sum -5.525 -1.508 0.944 5.804 Atomic orbital electron populations 1.20930 0.87886 1.04924 1.03641 1.20105 0.98205 0.91590 0.99422 1.21389 0.91052 0.99694 0.95858 1.20383 0.95012 0.92551 1.10306 1.18218 0.86846 0.84158 0.76149 1.90810 1.14774 1.87888 1.50615 1.45646 1.10906 1.04607 1.74940 1.21116 0.93066 0.80598 1.02717 1.20557 0.95817 0.95098 0.92710 1.19478 0.93980 1.00382 0.93412 1.21320 0.92957 1.00252 0.99385 1.21441 1.00962 0.99160 0.92492 1.21458 0.95063 0.99574 0.98987 1.21377 0.94681 1.00080 0.98750 1.21127 1.00308 1.00136 0.92527 1.23776 0.98538 1.01856 0.94212 1.23338 0.98639 0.86169 0.89878 0.86091 1.92787 1.90262 1.59585 1.77723 1.23628 1.03267 0.96758 0.93968 1.18496 0.83645 0.90758 0.95524 1.84633 1.15287 1.96061 1.34187 1.19739 0.94125 0.93505 1.04389 1.25029 1.04525 1.02122 0.87851 1.86497 1.74014 1.45930 1.30192 0.93917 0.77294 0.73359 0.87656 1.21368 0.92265 0.99719 0.96460 0.90219 0.89335 0.89875 0.82498 0.75152 0.91510 0.90572 0.83851 0.84238 0.85101 0.85430 0.85908 0.88474 0.87320 0.88357 0.88731 0.74031 0.90273 0.75467 1.21326 1.20570 0.83271 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 1.00 10.00 71.24 0.71 1.71 16 2 C -0.09 0.26 5.87 -19.89 -0.12 0.15 16 3 C -0.06 0.12 9.18 22.52 0.21 0.33 16 4 C -0.18 -0.84 5.89 -20.01 -0.12 -0.96 16 5 C 0.56 3.81 7.76 86.70 0.67 4.48 16 6 O -0.56 -8.35 15.16 16.93 0.26 -8.10 16 7 N -0.71 0.39 5.11 -466.27 -2.38 -1.99 16 8 C 0.15 -0.16 4.85 86.38 0.42 0.26 16 9 C -0.04 0.18 0.63 -52.40 -0.03 0.15 16 10 C -0.07 0.19 4.61 -19.87 -0.09 0.09 16 11 C -0.12 0.50 9.05 22.27 0.20 0.70 16 12 C -0.12 0.38 10.05 22.27 0.22 0.60 16 13 C -0.13 0.15 10.05 22.27 0.22 0.38 16 14 C -0.13 0.00 10.05 22.27 0.22 0.23 16 15 C -0.12 0.04 9.33 22.27 0.21 0.25 16 16 C -0.15 0.83 6.03 31.12 0.19 1.02 16 17 C 0.06 -0.13 5.32 31.12 0.17 0.03 16 18 H 0.12 -0.54 7.62 -2.39 -0.02 -0.56 16 19 F -0.22 -0.97 17.41 44.97 0.78 -0.19 16 20 C -0.14 0.48 7.00 31.12 0.22 0.70 16 21 C 0.16 1.20 6.69 22.84 0.15 1.36 16 22 O -0.49 -4.95 10.91 -68.73 -0.75 -5.70 16 23 C -0.12 -0.45 5.30 -19.80 -0.10 -0.56 16 24 C -0.09 -0.14 2.37 71.24 0.17 0.02 16 25 O -0.56 -1.76 12.86 -148.98 -1.92 -3.67 16 26 Si 0.77 -1.87 30.19 68.60 2.07 0.20 16 27 C -0.08 0.02 8.30 22.30 0.19 0.20 16 28 H 0.08 -0.70 8.14 -2.39 -0.02 -0.72 16 29 H 0.09 -1.01 8.08 -2.39 -0.02 -1.03 16 30 H 0.08 -0.83 8.08 -2.39 -0.02 -0.85 16 31 H 0.16 -1.34 6.40 -2.91 -0.02 -1.35 16 32 H 0.41 -2.27 6.24 -92.71 -0.58 -2.85 16 33 H 0.07 0.11 7.95 -2.38 -0.02 0.09 16 34 H 0.08 -0.03 7.31 -2.39 -0.02 -0.04 16 35 H 0.14 -1.23 6.41 -2.91 -0.02 -1.25 16 36 H 0.14 -0.95 8.06 -2.91 -0.02 -0.98 16 37 H 0.13 -0.50 8.06 -2.91 -0.02 -0.52 16 38 H 0.13 -0.26 8.06 -2.91 -0.02 -0.29 16 39 H 0.12 -0.18 8.06 -2.91 -0.02 -0.20 16 40 H 0.10 -0.75 7.89 -2.39 -0.02 -0.77 16 41 H 0.11 -0.66 6.79 -2.39 -0.02 -0.67 16 42 H 0.10 -0.20 8.10 -2.39 -0.02 -0.22 16 43 H 0.09 -0.45 8.10 -2.39 -0.02 -0.47 16 44 H 0.40 2.45 9.06 -74.06 -0.67 1.78 16 45 H 0.08 0.12 7.83 -2.38 -0.02 0.10 16 46 H 0.39 -1.78 8.74 -74.06 -0.65 -2.43 16 47 H -0.29 -0.59 7.11 99.48 0.71 0.12 16 48 H -0.28 -0.50 6.75 99.48 0.67 0.17 16 49 H 0.15 -0.54 4.87 -2.91 -0.01 -0.55 16 Total: 0.00 -22.70 403.64 0.90 -21.80 By element: Atomic # 1 Polarization: -12.62 SS G_CDS: -0.87 Total: -13.49 kcal Atomic # 6 Polarization: 7.43 SS G_CDS: 3.70 Total: 11.14 kcal Atomic # 7 Polarization: 0.39 SS G_CDS: -2.38 Total: -1.99 kcal Atomic # 8 Polarization: -15.06 SS G_CDS: -2.41 Total: -17.47 kcal Atomic # 9 Polarization: -0.97 SS G_CDS: 0.78 Total: -0.19 kcal Atomic # 14 Polarization: -1.87 SS G_CDS: 2.07 Total: 0.20 kcal Total: -22.70 0.90 -21.80 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13458982_13422088.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -51.586 kcal (2) G-P(sol) polarization free energy of solvation -22.699 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -74.285 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.900 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.799 kcal (6) G-S(sol) free energy of system = (1) + (5) -73.384 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.29 seconds