Wall clock time and date at job start Sat Mar 6 2021 21:28:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46894 * 1 3 3 C 1.46895 * 111.00292 * 2 1 4 4 C 1.39056 * 110.99724 * 123.95139 * 2 1 3 5 5 C 1.39193 * 119.92852 * 120.00065 * 4 2 1 6 6 C 1.50701 * 119.96740 * 0.04385 * 5 4 2 7 7 O 1.42892 * 109.47225 * 74.97698 * 6 5 4 8 8 Si 1.86301 * 109.47137 * 194.97975 * 6 5 4 9 9 C 1.37640 * 120.06900 * 180.02562 * 5 4 2 10 10 C 1.39770 * 119.92653 * 359.97438 * 9 5 4 11 11 C 1.47520 * 120.06502 * 179.97438 * 10 9 5 12 12 O 1.21593 * 120.00109 * 0.02562 * 11 10 9 13 13 N 1.34778 * 119.99938 * 180.02562 * 11 10 9 14 14 C 1.46495 * 120.00214 * 179.97438 * 13 11 10 15 15 C 1.53006 * 109.47261 * 175.10796 * 14 13 11 16 16 C 1.50698 * 112.84825 * 294.00726 * 15 14 13 17 17 C 1.38241 * 119.99312 * 113.51224 * 16 15 14 18 18 C 1.38237 * 119.99317 * 179.76576 * 17 16 15 19 19 C 1.38234 * 119.99920 * 0.50686 * 18 17 16 20 20 C 1.38228 * 120.00478 * 359.74716 * 19 18 17 21 21 C 1.38229 * 120.00411 * 293.78567 * 16 15 14 22 22 C 1.53781 * 113.61354 * 162.70174 * 15 14 13 23 23 C 1.53780 * 87.08136 * 270.88546 * 22 15 14 24 24 H 1.09003 * 113.61343 * 89.11908 * 23 22 15 25 25 F 1.39899 * 113.61200 * 220.01912 * 23 22 15 26 26 C 1.53775 * 87.08153 * 334.56857 * 23 22 15 27 27 C 1.39817 * 119.86520 * 0.02562 * 10 9 5 28 28 C 1.37582 * 119.93055 * 359.97438 * 27 10 9 29 29 H 1.09003 * 109.47295 * 296.04780 * 1 2 3 30 30 H 1.09004 * 109.47263 * 56.04897 * 1 2 3 31 31 H 1.08998 * 109.47539 * 176.04730 * 1 2 3 32 32 H 1.08996 * 109.47533 * 183.95142 * 3 2 1 33 33 H 1.08997 * 109.47066 * 303.95363 * 3 2 1 34 34 H 1.09002 * 109.47154 * 63.94964 * 3 2 1 35 35 H 1.09000 * 109.47132 * 314.97804 * 6 5 4 36 36 H 0.96707 * 114.00179 * 59.99829 * 7 6 5 37 37 H 1.48495 * 110.00049 * 180.02562 * 8 6 5 38 38 H 1.48501 * 109.99970 * 301.31557 * 8 6 5 39 39 H 1.08002 * 120.03226 * 180.02562 * 9 5 4 40 40 H 0.97000 * 120.00030 * 0.02562 * 13 11 10 41 41 H 1.09001 * 109.47520 * 295.11264 * 14 13 11 42 42 H 1.09002 * 109.46883 * 55.10968 * 14 13 11 43 43 H 1.07993 * 120.00574 * 0.02562 * 17 16 15 44 44 H 1.07998 * 119.99637 * 180.23374 * 18 17 16 45 45 H 1.08003 * 119.99506 * 179.72303 * 19 18 17 46 46 H 1.07995 * 120.00261 * 179.97438 * 20 19 18 47 47 H 1.08000 * 119.99781 * 0.02562 * 21 16 15 48 48 H 1.09000 * 113.61501 * 25.43336 * 22 15 14 49 49 H 1.09001 * 113.61474 * 156.33476 * 22 15 14 50 50 H 1.08999 * 113.61246 * 270.88374 * 26 23 22 51 51 H 1.09003 * 113.69404 * 139.99152 * 26 23 22 52 52 H 1.08002 * 120.03378 * 179.72160 * 27 10 9 53 53 H 1.08001 * 119.96495 * 179.97438 * 28 27 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4689 0.0000 0.0000 3 6 1.9954 1.3714 0.0000 4 6 1.9672 -0.7250 1.0769 5 6 2.7792 -1.8330 0.8520 6 6 3.1177 -2.2444 -0.5577 7 8 4.0869 -1.3436 -1.0971 8 14 3.8129 -3.9729 -0.5502 9 6 3.2735 -2.5531 1.9157 10 6 2.9598 -2.1703 3.2229 11 6 3.4875 -2.9402 4.3653 12 8 4.1965 -3.9085 4.1702 13 7 3.1837 -2.5702 5.6251 14 6 3.7072 -3.3350 6.7596 15 6 3.3183 -2.6401 8.0662 16 6 3.9778 -1.2953 8.2325 17 6 3.2122 -0.1443 8.2222 18 6 3.8166 1.0890 8.3796 19 6 5.1874 1.1719 8.5368 20 6 5.9535 0.0213 8.5418 21 6 5.3486 -1.2123 8.3897 22 6 3.4382 -3.5444 9.3042 23 6 1.9852 -3.9708 9.0362 24 1 1.8978 -4.8296 8.3707 25 9 1.2163 -4.1014 10.1977 26 6 1.8027 -2.6194 8.3254 27 6 2.1439 -1.0569 3.4454 28 6 1.6529 -0.3412 2.3779 29 1 -0.3634 0.4513 0.9233 30 1 -0.3634 0.5739 -0.8525 31 1 -0.3634 -1.0252 -0.0708 32 1 3.0827 1.3432 -0.0708 33 1 1.5898 1.9162 -0.8524 34 1 1.7043 1.8723 0.9233 35 1 2.2165 -2.2179 -1.1703 36 1 4.9166 -1.3152 -0.6010 37 1 4.1514 -4.3902 -1.9345 38 1 5.0240 -4.0295 0.3072 39 1 3.9038 -3.4124 1.7406 40 1 2.6178 -1.7979 5.7807 41 1 3.2878 -4.3409 6.7443 42 1 4.7933 -3.3931 6.6883 43 1 2.1417 -0.2088 8.0954 44 1 3.2181 1.9880 8.3754 45 1 5.6600 2.1358 8.6553 46 1 7.0245 0.0861 8.6642 47 1 5.9471 -2.1113 8.3928 48 1 4.1594 -4.3532 9.1860 49 1 3.5670 -2.9940 10.2362 50 1 1.4843 -1.8161 8.9898 51 1 1.2035 -2.6798 7.4168 52 1 1.8961 -0.7613 4.4542 53 1 1.0223 0.5187 2.5492 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13458982_13422196.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:28:28 Heat of formation + Delta-G solvation = -10.133096 kcal Electronic energy + Delta-G solvation = -36242.833537 eV Core-core repulsion = 31575.804396 eV Total energy + Delta-G solvation = -4667.029140 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 385.184 amu Computer time = 1.27 seconds Orbital eigenvalues (eV) -48.56699 -41.89995 -41.32448 -40.19888 -38.77946 -37.92995 -37.24718 -35.49166 -32.88394 -32.05737 -31.86271 -31.40155 -28.69650 -28.50902 -27.13149 -26.90995 -25.98818 -24.84125 -23.32335 -23.14530 -22.77985 -22.50566 -21.22496 -20.13618 -19.04151 -18.35789 -17.95737 -17.66396 -17.53735 -17.17098 -16.61121 -16.52748 -16.39089 -16.28525 -16.05931 -15.97668 -15.68400 -15.58122 -15.50160 -15.23202 -15.00239 -14.70992 -14.61852 -14.49652 -14.29552 -14.14660 -13.96498 -13.69521 -13.57781 -13.46624 -13.36014 -13.10433 -12.97358 -12.65752 -12.60725 -12.51373 -12.42441 -12.20940 -12.16766 -11.85045 -11.78927 -11.34533 -11.25623 -11.14372 -10.57029 -10.28362 -10.12018 -9.84069 -9.76866 -9.65750 -9.48535 -4.98678 -0.38014 0.15022 0.39691 0.47863 1.27199 1.54076 1.64954 1.88654 1.95831 2.62811 2.80687 2.81738 3.14056 3.23776 3.42629 3.43937 3.50899 3.58898 3.63101 3.67552 3.79151 3.88176 4.03948 4.10542 4.11512 4.15175 4.21328 4.25258 4.28156 4.39393 4.45533 4.48054 4.55174 4.59539 4.62315 4.64276 4.66247 4.68502 4.69308 4.72184 4.81928 4.86871 4.95533 4.98618 5.01117 5.05308 5.08621 5.12709 5.13223 5.24800 5.27501 5.28506 5.55874 5.56518 5.62600 5.63106 5.87695 6.08404 6.30576 6.38636 6.51007 7.07111 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 N -0.522 5.522 3 C 0.033 3.967 4 C 0.141 3.859 5 C -0.110 4.110 6 C -0.048 4.048 7 O -0.533 6.533 8 Si 0.737 3.263 9 C -0.066 4.066 10 C -0.148 4.148 11 C 0.559 3.441 12 O -0.576 6.576 13 N -0.706 5.706 14 C 0.146 3.854 15 C -0.042 4.042 16 C -0.071 4.071 17 C -0.121 4.121 18 C -0.124 4.124 19 C -0.134 4.134 20 C -0.131 4.131 21 C -0.123 4.123 22 C -0.139 4.139 23 C 0.056 3.944 24 H 0.126 0.874 25 F -0.224 7.224 26 C -0.147 4.147 27 C -0.056 4.056 28 C -0.155 4.155 29 H 0.043 0.957 30 H 0.082 0.918 31 H 0.073 0.927 32 H 0.060 0.940 33 H 0.081 0.919 34 H 0.041 0.959 35 H 0.126 0.874 36 H 0.379 0.621 37 H -0.294 1.294 38 H -0.293 1.293 39 H 0.131 0.869 40 H 0.412 0.588 41 H 0.082 0.918 42 H 0.068 0.932 43 H 0.144 0.856 44 H 0.138 0.862 45 H 0.130 0.870 46 H 0.127 0.873 47 H 0.123 0.877 48 H 0.095 0.905 49 H 0.096 0.904 50 H 0.106 0.894 51 H 0.100 0.900 52 H 0.155 0.845 53 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.840 4.368 2.427 6.956 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 N -0.243 5.243 3 C -0.113 4.113 4 C 0.046 3.954 5 C -0.111 4.111 6 C -0.158 4.158 7 O -0.340 6.340 8 Si 0.644 3.356 9 C -0.086 4.086 10 C -0.151 4.151 11 C 0.348 3.652 12 O -0.457 6.457 13 N -0.358 5.358 14 C 0.023 3.977 15 C -0.043 4.043 16 C -0.071 4.071 17 C -0.139 4.139 18 C -0.142 4.142 19 C -0.152 4.152 20 C -0.149 4.149 21 C -0.141 4.141 22 C -0.177 4.177 23 C 0.021 3.979 24 H 0.143 0.857 25 F -0.204 7.204 26 C -0.184 4.184 27 C -0.075 4.075 28 C -0.174 4.174 29 H 0.061 0.939 30 H 0.100 0.900 31 H 0.091 0.909 32 H 0.079 0.921 33 H 0.099 0.901 34 H 0.059 0.941 35 H 0.143 0.857 36 H 0.227 0.773 37 H -0.221 1.221 38 H -0.220 1.220 39 H 0.149 0.851 40 H 0.250 0.750 41 H 0.100 0.900 42 H 0.086 0.914 43 H 0.162 0.838 44 H 0.156 0.844 45 H 0.148 0.852 46 H 0.145 0.855 47 H 0.141 0.859 48 H 0.114 0.886 49 H 0.114 0.886 50 H 0.124 0.876 51 H 0.119 0.881 52 H 0.173 0.827 53 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges -4.015 3.062 1.280 5.209 hybrid contribution 0.837 1.467 1.010 1.968 sum -3.178 4.529 2.290 5.988 Atomic orbital electron populations 1.22560 0.84346 1.03296 1.02032 1.59368 1.09471 1.14961 1.40547 1.22418 1.00661 0.86501 1.01706 1.18947 0.93908 0.92968 0.89537 1.20121 0.99320 0.96124 0.95534 1.24769 0.96414 1.02189 0.92472 1.86628 1.27934 1.63353 1.56088 0.94357 0.85067 0.78700 0.77444 1.21179 0.97351 0.98575 0.91446 1.19812 1.03419 0.98998 0.92837 1.18344 0.79725 0.83558 0.83589 1.90802 1.39450 1.29491 1.85940 1.45648 1.52538 1.33105 1.04523 1.21165 0.99568 0.94660 0.82350 1.20579 0.96311 0.92975 0.94419 1.19488 0.93367 0.93798 1.00432 1.21313 1.00804 0.91556 1.00226 1.21437 0.94946 0.98530 0.99297 1.21447 0.94750 0.98960 1.00010 1.21373 1.00652 0.92842 1.00047 1.21134 0.94712 0.98069 1.00220 1.23632 0.96706 0.99624 0.97784 1.23353 0.90380 1.00211 0.83995 0.85686 1.92789 1.77737 1.97399 1.52522 1.23776 0.94736 0.97390 1.02524 1.21387 0.93503 0.92113 1.00486 1.21837 1.01887 1.01484 0.92236 0.93866 0.89974 0.90859 0.92069 0.90070 0.94058 0.85657 0.77299 1.22121 1.21986 0.85135 0.75003 0.90021 0.91398 0.83842 0.84413 0.85204 0.85478 0.85861 0.88649 0.88593 0.87586 0.88129 0.82724 0.83320 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.10 9.34 127.69 1.19 1.09 16 2 N -0.52 0.33 4.20 -745.13 -3.13 -2.80 16 3 C 0.03 -0.07 9.38 127.69 1.20 1.13 16 4 C 0.14 -0.03 4.70 38.47 0.18 0.15 16 5 C -0.11 -0.18 5.27 -19.78 -0.10 -0.29 16 6 C -0.05 -0.11 2.33 71.24 0.17 0.06 16 7 O -0.53 -2.44 12.88 -148.98 -1.92 -4.36 16 8 Si 0.74 2.10 30.24 68.60 2.07 4.18 16 9 C -0.07 -0.22 8.19 22.50 0.18 -0.03 16 10 C -0.15 -0.18 5.88 -20.08 -0.12 -0.30 16 11 C 0.56 2.14 7.76 86.69 0.67 2.82 16 12 O -0.58 -7.06 16.33 -4.01 -0.07 -7.13 16 13 N -0.71 2.10 5.13 -466.28 -2.39 -0.29 16 14 C 0.15 -0.46 4.85 86.38 0.42 -0.04 16 15 C -0.04 0.24 0.63 -52.40 -0.03 0.21 16 16 C -0.07 0.23 4.67 -19.87 -0.09 0.14 16 17 C -0.12 0.55 9.05 22.27 0.20 0.76 16 18 C -0.12 0.39 10.05 22.27 0.22 0.61 16 19 C -0.13 0.15 10.05 22.27 0.22 0.38 16 20 C -0.13 0.02 10.05 22.27 0.22 0.24 16 21 C -0.12 0.09 9.33 22.27 0.21 0.30 16 22 C -0.14 0.66 7.00 31.12 0.22 0.87 16 23 C 0.06 -0.23 5.32 31.12 0.17 -0.06 16 24 H 0.13 -0.86 7.61 -2.39 -0.02 -0.88 16 25 F -0.22 -0.70 17.41 44.97 0.78 0.08 16 26 C -0.15 1.07 5.97 31.12 0.19 1.26 16 27 C -0.06 0.25 9.53 22.50 0.21 0.46 16 28 C -0.15 0.61 8.53 22.36 0.19 0.80 16 29 H 0.04 -0.28 7.10 -2.39 -0.02 -0.29 16 30 H 0.08 -0.43 8.12 -2.39 -0.02 -0.45 16 31 H 0.07 -0.30 8.14 -2.39 -0.02 -0.32 16 32 H 0.06 0.03 8.14 -2.39 -0.02 0.01 16 33 H 0.08 -0.26 8.12 -2.39 -0.02 -0.28 16 34 H 0.04 -0.19 7.32 -2.39 -0.02 -0.20 16 35 H 0.13 0.22 7.78 -2.39 -0.02 0.20 16 36 H 0.38 -0.09 8.70 -74.05 -0.64 -0.73 16 37 H -0.29 -2.72 7.11 99.48 0.71 -2.01 16 38 H -0.29 -2.51 6.68 99.48 0.66 -1.84 16 39 H 0.13 0.75 4.43 -2.91 -0.01 0.74 16 40 H 0.41 -3.29 6.09 -92.71 -0.56 -3.85 16 41 H 0.08 -0.29 7.31 -2.39 -0.02 -0.31 16 42 H 0.07 0.01 7.95 -2.39 -0.02 -0.01 16 43 H 0.14 -1.32 6.44 -2.91 -0.02 -1.34 16 44 H 0.14 -0.92 8.06 -2.91 -0.02 -0.94 16 45 H 0.13 -0.48 8.06 -2.91 -0.02 -0.50 16 46 H 0.13 -0.27 8.06 -2.91 -0.02 -0.29 16 47 H 0.12 -0.24 8.06 -2.91 -0.02 -0.26 16 48 H 0.09 -0.58 8.10 -2.39 -0.02 -0.60 16 49 H 0.10 -0.27 8.10 -2.39 -0.02 -0.29 16 50 H 0.11 -0.75 6.83 -2.39 -0.02 -0.77 16 51 H 0.10 -1.02 7.75 -2.39 -0.02 -1.04 16 52 H 0.16 -1.68 6.39 -2.91 -0.02 -1.70 16 53 H 0.15 -1.15 6.99 -2.91 -0.02 -1.17 16 Total: 0.00 -19.73 427.47 0.81 -18.92 By element: Atomic # 1 Polarization: -18.87 SS G_CDS: -0.26 Total: -19.13 kcal Atomic # 6 Polarization: 4.82 SS G_CDS: 5.72 Total: 10.54 kcal Atomic # 7 Polarization: 2.42 SS G_CDS: -5.52 Total: -3.10 kcal Atomic # 8 Polarization: -9.50 SS G_CDS: -1.98 Total: -11.48 kcal Atomic # 9 Polarization: -0.70 SS G_CDS: 0.78 Total: 0.08 kcal Atomic # 14 Polarization: 2.10 SS G_CDS: 2.07 Total: 4.18 kcal Total: -19.73 0.81 -18.92 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13458982_13422196.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 8.784 kcal (2) G-P(sol) polarization free energy of solvation -19.729 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -10.945 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.811 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.917 kcal (6) G-S(sol) free energy of system = (1) + (5) -10.133 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.27 seconds