Wall clock time and date at job start Sat Mar 6 2021 21:28:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86296 * 109.47270 * 2 1 4 4 C 1.50705 * 109.47233 * 120.00082 * 2 1 3 5 5 C 1.32700 * 124.68443 * 65.30060 * 4 2 1 6 6 C 1.44498 * 113.09976 * 180.19678 * 5 4 2 7 7 C 1.47048 * 123.49384 * 179.76600 * 6 5 4 8 8 O 1.21661 * 119.99817 * 179.72954 * 7 6 5 9 9 N 1.34773 * 119.99728 * 359.45629 * 7 6 5 10 10 C 1.46501 * 119.99746 * 180.27747 * 9 7 6 11 11 C 1.52998 * 109.47195 * 175.95472 * 10 9 7 12 12 C 1.50704 * 112.84743 * 65.10916 * 11 10 9 13 13 C 1.38230 * 120.00313 * 245.83909 * 12 11 10 14 14 C 1.38232 * 120.00185 * 179.78877 * 13 12 11 15 15 C 1.38239 * 120.00061 * 0.47098 * 14 13 12 16 16 C 1.38236 * 119.99515 * 359.76320 * 15 14 13 17 17 C 1.38231 * 120.00475 * 0.02813 * 16 15 14 18 18 C 1.53778 * 113.61549 * 293.91971 * 11 10 9 19 19 C 1.53789 * 87.07910 * 270.88170 * 18 11 10 20 20 H 1.08999 * 113.61492 * 89.11010 * 19 18 11 21 21 F 1.39896 * 113.61268 * 219.93360 * 19 18 11 22 22 C 1.53775 * 113.61777 * 196.30676 * 11 10 9 23 23 C 1.36231 * 113.01413 * 359.50116 * 6 5 4 24 24 Cl 1.73604 * 124.60389 * 180.24995 * 23 6 5 25 25 S 1.70449 * 110.78833 * 0.26507 * 23 6 5 26 26 H 0.96703 * 114.00198 * 59.99861 * 1 2 3 27 27 H 1.09001 * 109.47424 * 239.99795 * 2 1 3 28 28 H 1.48494 * 109.99931 * 298.68173 * 3 2 1 29 29 H 1.48506 * 109.99800 * 60.00296 * 3 2 1 30 30 H 1.08000 * 123.44853 * 359.96895 * 5 4 2 31 31 H 0.96999 * 120.00131 * 0.27061 * 9 7 6 32 32 H 1.09001 * 109.46851 * 295.95409 * 10 9 7 33 33 H 1.08994 * 109.47229 * 55.95168 * 10 9 7 34 34 H 1.08002 * 119.99590 * 0.02562 * 13 12 11 35 35 H 1.08003 * 120.00027 * 180.25893 * 14 13 12 36 36 H 1.07996 * 119.99916 * 179.79305 * 15 14 13 37 37 H 1.08002 * 119.99573 * 180.02562 * 16 15 14 38 38 H 1.07997 * 120.00334 * 179.97438 * 17 16 15 39 39 H 1.09002 * 113.61498 * 25.42383 * 18 11 10 40 40 H 1.09000 * 113.61636 * 156.25326 * 18 11 10 41 41 H 1.09000 * 113.61799 * 203.66922 * 22 11 10 42 42 H 1.09003 * 113.61314 * 334.56721 * 22 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.7532 -2.0010 1.4830 6 6 2.3355 -2.4188 2.7377 7 6 2.2684 -3.7977 3.2442 8 8 2.7858 -4.0807 4.3083 9 7 1.6290 -4.7467 2.5322 10 6 1.5569 -6.1191 3.0397 11 6 0.6977 -6.9662 2.0990 12 6 1.3093 -7.1242 0.7308 13 6 0.6881 -6.5694 -0.3723 14 6 1.2514 -6.7106 -1.6267 15 6 2.4310 -7.4150 -1.7794 16 6 3.0498 -7.9740 -0.6768 17 6 2.4887 -7.8291 0.5782 18 6 -0.7808 -6.5444 2.0678 19 6 -1.0024 -7.5204 3.2355 20 1 -0.8550 -7.0684 4.2163 21 9 -2.1976 -8.2417 3.1438 22 6 0.2275 -8.2919 2.7204 23 6 2.9580 -1.4041 3.4001 24 17 3.7620 -1.5721 4.9295 25 16 2.8397 0.0529 2.5234 26 1 -0.3934 0.4417 -0.7650 27 1 1.7923 -0.5139 -0.8900 28 1 1.5879 2.4585 -1.2242 29 1 1.5615 2.4678 1.2086 30 1 1.2238 -2.6696 0.8204 31 1 1.2164 -4.5210 1.6838 32 1 2.5610 -6.5400 3.0926 33 1 1.1116 -6.1157 4.0345 34 1 -0.2355 -6.0222 -0.2536 35 1 0.7682 -6.2735 -2.4880 36 1 2.8694 -7.5282 -2.7598 37 1 3.9716 -8.5240 -0.7960 38 1 2.9719 -8.2662 1.4395 39 1 -0.9427 -5.5001 2.3349 40 1 -1.2977 -6.8323 1.1523 41 1 -0.0146 -9.0579 1.9837 42 1 0.8792 -8.6575 3.5141 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13458982_13431040.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:28:37 Heat of formation + Delta-G solvation = -29.235911 kcal Electronic energy + Delta-G solvation = -30306.433398 eV Core-core repulsion = 25899.967120 eV Total energy + Delta-G solvation = -4406.466278 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 382.059 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -48.52630 -41.74528 -40.59638 -39.03430 -38.71120 -37.88776 -37.11324 -35.25615 -32.15438 -31.95562 -31.85641 -29.02477 -27.26832 -26.92210 -25.74100 -24.48539 -23.31403 -22.59994 -22.04303 -20.72766 -19.96868 -19.21029 -18.74345 -18.53134 -17.89763 -17.44198 -16.96588 -16.65960 -16.49270 -16.20867 -16.14114 -15.86390 -15.58116 -15.52649 -15.18738 -14.89227 -14.75648 -14.45925 -14.41203 -14.27227 -14.17715 -14.06077 -13.69211 -13.59378 -13.38890 -13.12447 -12.61597 -12.56514 -12.53072 -12.42511 -12.29113 -12.06826 -11.95221 -11.87833 -11.41644 -11.37060 -10.86031 -10.68530 -10.15088 -9.91671 -9.85764 -9.73542 -9.65962 -5.23951 -0.57197 -0.19323 0.31898 0.40186 0.44927 0.70908 1.01219 1.11395 1.38539 1.73629 2.10021 2.29788 2.73570 3.00335 3.02659 3.14944 3.32007 3.40831 3.46055 3.53342 3.78258 3.87104 3.88379 3.98621 4.00608 4.09212 4.12392 4.16448 4.37637 4.41953 4.50342 4.53438 4.56023 4.57885 4.64824 4.68850 4.73251 4.85336 4.91936 4.98917 5.03034 5.16655 5.33225 5.48058 5.54308 5.55627 5.98513 6.17961 6.42985 7.20105 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.531 6.531 2 C -0.033 4.033 3 Si 0.641 3.359 4 C -0.188 4.188 5 C -0.071 4.071 6 C -0.158 4.158 7 C 0.577 3.423 8 O -0.518 6.518 9 N -0.720 5.720 10 C 0.148 3.852 11 C -0.055 4.055 12 C -0.068 4.068 13 C -0.119 4.119 14 C -0.116 4.116 15 C -0.120 4.120 16 C -0.115 4.115 17 C -0.108 4.108 18 C -0.154 4.154 19 C 0.065 3.935 20 H 0.112 0.888 21 F -0.204 7.204 22 C -0.139 4.139 23 C -0.116 4.116 24 Cl 0.027 6.973 25 S 0.247 5.753 26 H 0.385 0.615 27 H 0.091 0.909 28 H -0.233 1.233 29 H -0.231 1.231 30 H 0.155 0.845 31 H 0.401 0.599 32 H 0.078 0.922 33 H 0.079 0.921 34 H 0.124 0.876 35 H 0.123 0.877 36 H 0.122 0.878 37 H 0.123 0.877 38 H 0.122 0.878 39 H 0.085 0.915 40 H 0.103 0.897 41 H 0.103 0.897 42 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.325 1.913 -6.093 6.522 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.339 6.339 2 C -0.145 4.145 3 Si 0.539 3.461 4 C -0.305 4.305 5 C -0.100 4.100 6 C -0.177 4.177 7 C 0.363 3.637 8 O -0.394 6.394 9 N -0.372 5.372 10 C 0.024 3.976 11 C -0.056 4.056 12 C -0.068 4.068 13 C -0.137 4.137 14 C -0.134 4.134 15 C -0.138 4.138 16 C -0.133 4.133 17 C -0.126 4.126 18 C -0.192 4.192 19 C 0.029 3.971 20 H 0.130 0.870 21 F -0.185 7.185 22 C -0.177 4.177 23 C -0.263 4.263 24 Cl 0.056 6.944 25 S 0.511 5.489 26 H 0.234 0.766 27 H 0.109 0.891 28 H -0.156 1.156 29 H -0.154 1.154 30 H 0.172 0.828 31 H 0.236 0.764 32 H 0.096 0.904 33 H 0.097 0.903 34 H 0.141 0.859 35 H 0.141 0.859 36 H 0.140 0.860 37 H 0.141 0.859 38 H 0.140 0.860 39 H 0.104 0.896 40 H 0.122 0.878 41 H 0.121 0.879 42 H 0.107 0.893 Dipole moment (debyes) X Y Z Total from point charges 2.134 3.669 -4.352 6.079 hybrid contribution -1.739 -1.650 -1.168 2.667 sum 0.395 2.019 -5.521 5.891 Atomic orbital electron populations 1.86599 1.17095 1.80103 1.50129 1.23993 0.84752 1.10088 0.95698 0.95251 0.91840 0.75284 0.83743 1.23498 1.08278 0.97481 1.01290 1.20959 0.99050 0.95094 0.94932 1.20155 1.06065 0.94740 0.96718 1.17352 0.78576 0.83625 0.84172 1.90886 1.45403 1.81720 1.21418 1.45677 1.57560 1.09095 1.24912 1.21133 1.00057 0.80312 0.96064 1.20766 0.94296 0.97310 0.93215 1.19391 0.95456 0.98700 0.93278 1.21075 1.00040 1.00375 0.92247 1.21167 0.95996 0.98981 0.97245 1.21226 0.95821 0.97786 0.98937 1.21189 0.99956 0.99534 0.92619 1.20976 0.95277 0.98770 0.97610 1.23785 0.94779 1.00836 0.99772 1.23143 0.80811 0.92924 1.00206 0.87040 1.92826 1.48659 1.79398 1.97572 1.23686 0.96501 0.96172 1.01330 1.25511 1.03980 1.00551 0.96244 1.98439 1.75807 1.97290 1.22844 1.83350 1.49955 1.05960 1.09587 0.76632 0.89118 1.15623 1.15445 0.82797 0.76376 0.90400 0.90272 0.85861 0.85930 0.86001 0.85899 0.86015 0.89614 0.87828 0.87881 0.89313 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.66 12.86 -35.23 -0.45 0.20 16 2 C -0.03 0.07 2.93 36.01 0.11 0.18 16 3 Si 0.64 -1.54 30.92 -169.99 -5.26 -6.80 16 4 C -0.19 0.09 5.68 -36.19 -0.21 -0.12 16 5 C -0.07 0.02 9.75 -39.00 -0.38 -0.36 16 6 C -0.16 -0.30 5.98 -104.58 -0.63 -0.92 16 7 C 0.58 1.60 7.79 -12.69 -0.10 1.50 16 8 O -0.52 -3.07 14.91 5.22 0.08 -2.99 16 9 N -0.72 0.15 5.17 -61.50 -0.32 -0.17 16 10 C 0.15 -0.12 4.84 -4.04 -0.02 -0.14 16 11 C -0.06 0.11 0.63 -154.85 -0.10 0.01 16 12 C -0.07 0.08 4.51 -104.62 -0.47 -0.39 16 13 C -0.12 0.16 9.05 -39.59 -0.36 -0.20 16 14 C -0.12 0.12 10.05 -39.58 -0.40 -0.27 16 15 C -0.12 0.08 10.05 -39.58 -0.40 -0.32 16 16 C -0.11 0.06 10.05 -39.58 -0.40 -0.34 16 17 C -0.11 0.06 9.34 -39.58 -0.37 -0.31 16 18 C -0.15 0.29 6.10 -25.92 -0.16 0.14 16 19 C 0.07 -0.05 5.32 -25.77 -0.14 -0.19 16 20 H 0.11 -0.21 7.61 -51.93 -0.39 -0.61 16 21 F -0.20 -0.49 17.41 2.25 0.04 -0.45 16 22 C -0.14 0.24 7.02 -25.78 -0.18 0.06 16 23 C -0.12 -0.26 6.87 30.01 0.21 -0.06 16 24 Cl 0.03 0.09 27.20 -51.86 -1.41 -1.32 16 25 S 0.25 -0.01 20.19 -107.50 -2.17 -2.18 16 26 H 0.38 -1.99 8.74 45.56 0.40 -1.60 16 27 H 0.09 -0.39 7.96 -51.93 -0.41 -0.81 16 28 H -0.23 0.23 7.11 56.52 0.40 0.63 16 29 H -0.23 -0.11 7.11 56.52 0.40 0.29 16 30 H 0.15 -0.36 7.10 -52.49 -0.37 -0.73 16 31 H 0.40 -0.76 6.77 -40.82 -0.28 -1.04 16 32 H 0.08 -0.01 7.97 -51.93 -0.41 -0.42 16 33 H 0.08 -0.04 7.31 -51.93 -0.38 -0.42 16 34 H 0.12 -0.34 6.41 -52.49 -0.34 -0.68 16 35 H 0.12 -0.31 8.06 -52.48 -0.42 -0.74 16 36 H 0.12 -0.25 8.06 -52.49 -0.42 -0.67 16 37 H 0.12 -0.21 8.06 -52.49 -0.42 -0.64 16 38 H 0.12 -0.18 8.06 -52.49 -0.42 -0.60 16 39 H 0.09 -0.20 7.95 -51.93 -0.41 -0.61 16 40 H 0.10 -0.19 6.79 -51.93 -0.35 -0.54 16 41 H 0.10 -0.11 8.09 -51.93 -0.42 -0.53 16 42 H 0.09 -0.23 8.10 -51.93 -0.42 -0.65 16 LS Contribution 381.86 15.07 5.75 5.75 Total: 0.00 -7.61 381.86 -12.40 -20.02 By element: Atomic # 1 Polarization: -5.65 SS G_CDS: -4.68 Total: -10.34 kcal Atomic # 6 Polarization: 2.26 SS G_CDS: -3.99 Total: -1.73 kcal Atomic # 7 Polarization: 0.15 SS G_CDS: -0.32 Total: -0.17 kcal Atomic # 8 Polarization: -2.41 SS G_CDS: -0.38 Total: -2.79 kcal Atomic # 9 Polarization: -0.49 SS G_CDS: 0.04 Total: -0.45 kcal Atomic # 14 Polarization: -1.54 SS G_CDS: -5.26 Total: -6.80 kcal Atomic # 16 Polarization: -0.01 SS G_CDS: -2.17 Total: -2.18 kcal Atomic # 17 Polarization: 0.09 SS G_CDS: -1.41 Total: -1.32 kcal Total LS contribution 5.75 Total: 5.75 kcal Total: -7.61 -12.40 -20.02 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13458982_13431040.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -9.218 kcal (2) G-P(sol) polarization free energy of solvation -7.613 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -16.832 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.404 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.018 kcal (6) G-S(sol) free energy of system = (1) + (5) -29.236 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds