Wall clock time and date at job start Sat Mar 6 2021 21:28:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86296 * 109.47270 * 2 1 4 4 C 1.50705 * 109.47233 * 120.00082 * 2 1 3 5 5 C 1.32700 * 124.68443 * 65.30060 * 4 2 1 6 6 C 1.44498 * 113.09976 * 180.19678 * 5 4 2 7 7 C 1.47048 * 123.49384 * 179.76600 * 6 5 4 8 8 O 1.21661 * 119.99817 * 179.72954 * 7 6 5 9 9 N 1.34773 * 119.99728 * 359.45629 * 7 6 5 10 10 C 1.46501 * 119.99746 * 180.27747 * 9 7 6 11 11 C 1.52998 * 109.47195 * 175.95472 * 10 9 7 12 12 C 1.50704 * 112.84743 * 65.10916 * 11 10 9 13 13 C 1.38230 * 120.00313 * 245.83909 * 12 11 10 14 14 C 1.38232 * 120.00185 * 179.78877 * 13 12 11 15 15 C 1.38239 * 120.00061 * 0.47098 * 14 13 12 16 16 C 1.38236 * 119.99515 * 359.76320 * 15 14 13 17 17 C 1.38231 * 120.00475 * 0.02813 * 16 15 14 18 18 C 1.53778 * 113.61549 * 293.91971 * 11 10 9 19 19 C 1.53789 * 87.07910 * 270.88170 * 18 11 10 20 20 H 1.08999 * 113.61492 * 89.11010 * 19 18 11 21 21 F 1.39896 * 113.61268 * 219.93360 * 19 18 11 22 22 C 1.53775 * 113.61777 * 196.30676 * 11 10 9 23 23 C 1.36231 * 113.01413 * 359.50116 * 6 5 4 24 24 Cl 1.73604 * 124.60389 * 180.24995 * 23 6 5 25 25 S 1.70449 * 110.78833 * 0.26507 * 23 6 5 26 26 H 0.96703 * 114.00198 * 59.99861 * 1 2 3 27 27 H 1.09001 * 109.47424 * 239.99795 * 2 1 3 28 28 H 1.48494 * 109.99931 * 298.68173 * 3 2 1 29 29 H 1.48506 * 109.99800 * 60.00296 * 3 2 1 30 30 H 1.08000 * 123.44853 * 359.96895 * 5 4 2 31 31 H 0.96999 * 120.00131 * 0.27061 * 9 7 6 32 32 H 1.09001 * 109.46851 * 295.95409 * 10 9 7 33 33 H 1.08994 * 109.47229 * 55.95168 * 10 9 7 34 34 H 1.08002 * 119.99590 * 0.02562 * 13 12 11 35 35 H 1.08003 * 120.00027 * 180.25893 * 14 13 12 36 36 H 1.07996 * 119.99916 * 179.79305 * 15 14 13 37 37 H 1.08002 * 119.99573 * 180.02562 * 16 15 14 38 38 H 1.07997 * 120.00334 * 179.97438 * 17 16 15 39 39 H 1.09002 * 113.61498 * 25.42383 * 18 11 10 40 40 H 1.09000 * 113.61636 * 156.25326 * 18 11 10 41 41 H 1.09000 * 113.61799 * 203.66922 * 22 11 10 42 42 H 1.09003 * 113.61314 * 334.56721 * 22 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.7532 -2.0010 1.4830 6 6 2.3355 -2.4188 2.7377 7 6 2.2684 -3.7977 3.2442 8 8 2.7858 -4.0807 4.3083 9 7 1.6290 -4.7467 2.5322 10 6 1.5569 -6.1191 3.0397 11 6 0.6977 -6.9662 2.0990 12 6 1.3093 -7.1242 0.7308 13 6 0.6881 -6.5694 -0.3723 14 6 1.2514 -6.7106 -1.6267 15 6 2.4310 -7.4150 -1.7794 16 6 3.0498 -7.9740 -0.6768 17 6 2.4887 -7.8291 0.5782 18 6 -0.7808 -6.5444 2.0678 19 6 -1.0024 -7.5204 3.2355 20 1 -0.8550 -7.0684 4.2163 21 9 -2.1976 -8.2417 3.1438 22 6 0.2275 -8.2919 2.7204 23 6 2.9580 -1.4041 3.4001 24 17 3.7620 -1.5721 4.9295 25 16 2.8397 0.0529 2.5234 26 1 -0.3934 0.4417 -0.7650 27 1 1.7923 -0.5139 -0.8900 28 1 1.5879 2.4585 -1.2242 29 1 1.5615 2.4678 1.2086 30 1 1.2238 -2.6696 0.8204 31 1 1.2164 -4.5210 1.6838 32 1 2.5610 -6.5400 3.0926 33 1 1.1116 -6.1157 4.0345 34 1 -0.2355 -6.0222 -0.2536 35 1 0.7682 -6.2735 -2.4880 36 1 2.8694 -7.5282 -2.7598 37 1 3.9716 -8.5240 -0.7960 38 1 2.9719 -8.2662 1.4395 39 1 -0.9427 -5.5001 2.3349 40 1 -1.2977 -6.8323 1.1523 41 1 -0.0146 -9.0579 1.9837 42 1 0.8792 -8.6575 3.5141 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13458982_13431040.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:28:37 Heat of formation + Delta-G solvation = -24.121118 kcal Electronic energy + Delta-G solvation = -30306.211604 eV Core-core repulsion = 25899.967120 eV Total energy + Delta-G solvation = -4406.244484 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 382.059 amu Computer time = 0.83 seconds Orbital eigenvalues (eV) -48.59020 -41.71276 -40.65065 -38.94909 -38.63925 -37.98606 -37.10586 -35.35114 -32.05483 -31.82940 -31.81924 -29.02516 -27.15068 -26.84330 -25.70678 -24.45709 -23.19167 -22.50306 -22.05199 -20.76664 -19.90847 -19.20863 -18.57592 -18.46201 -17.85999 -17.39026 -17.04809 -16.60761 -16.43866 -16.25418 -16.11254 -15.80089 -15.51664 -15.46557 -15.18496 -14.90857 -14.73622 -14.46589 -14.32580 -14.25464 -14.18279 -13.99575 -13.63118 -13.51112 -13.33552 -13.07299 -12.60401 -12.52350 -12.44291 -12.42468 -12.18601 -12.08534 -12.03431 -11.77735 -11.33016 -11.26562 -10.98163 -10.57847 -10.24606 -9.87602 -9.80243 -9.66998 -9.62645 -5.05154 -0.64073 -0.21339 0.42871 0.46409 0.51615 0.71065 1.02422 1.17925 1.52522 1.88718 2.06504 2.16145 2.84311 3.13031 3.17420 3.26038 3.42904 3.51879 3.58854 3.62320 3.85569 3.86473 3.92010 4.12814 4.14686 4.21237 4.31293 4.35291 4.44511 4.49913 4.62742 4.65103 4.67020 4.71119 4.72991 4.76336 4.85731 4.94800 4.96178 5.11393 5.16941 5.26720 5.29401 5.60312 5.66216 5.66874 6.11780 6.39430 6.56347 7.09221 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.549 6.549 2 C -0.032 4.032 3 Si 0.694 3.306 4 C -0.188 4.188 5 C -0.070 4.070 6 C -0.166 4.166 7 C 0.573 3.427 8 O -0.557 6.557 9 N -0.704 5.704 10 C 0.149 3.851 11 C -0.041 4.041 12 C -0.072 4.072 13 C -0.123 4.123 14 C -0.123 4.123 15 C -0.131 4.131 16 C -0.129 4.129 17 C -0.121 4.121 18 C -0.147 4.147 19 C 0.054 3.946 20 H 0.121 0.879 21 F -0.223 7.223 22 C -0.136 4.136 23 C -0.138 4.138 24 Cl 0.006 6.994 25 S 0.261 5.739 26 H 0.402 0.598 27 H 0.123 0.877 28 H -0.249 1.249 29 H -0.275 1.275 30 H 0.178 0.822 31 H 0.411 0.589 32 H 0.071 0.929 33 H 0.077 0.923 34 H 0.139 0.861 35 H 0.138 0.862 36 H 0.132 0.868 37 H 0.129 0.871 38 H 0.124 0.876 39 H 0.093 0.907 40 H 0.106 0.894 41 H 0.098 0.902 42 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.708 2.135 -7.931 8.244 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.360 6.360 2 C -0.144 4.144 3 Si 0.596 3.404 4 C -0.305 4.305 5 C -0.099 4.099 6 C -0.186 4.186 7 C 0.359 3.641 8 O -0.436 6.436 9 N -0.357 5.357 10 C 0.025 3.975 11 C -0.041 4.041 12 C -0.072 4.072 13 C -0.140 4.140 14 C -0.140 4.140 15 C -0.149 4.149 16 C -0.147 4.147 17 C -0.139 4.139 18 C -0.185 4.185 19 C 0.018 3.982 20 H 0.139 0.861 21 F -0.204 7.204 22 C -0.174 4.174 23 C -0.285 4.285 24 Cl 0.035 6.965 25 S 0.526 5.474 26 H 0.253 0.747 27 H 0.140 0.860 28 H -0.173 1.173 29 H -0.201 1.201 30 H 0.195 0.805 31 H 0.248 0.752 32 H 0.089 0.911 33 H 0.095 0.905 34 H 0.157 0.843 35 H 0.156 0.844 36 H 0.150 0.850 37 H 0.147 0.853 38 H 0.142 0.858 39 H 0.111 0.889 40 H 0.125 0.875 41 H 0.116 0.884 42 H 0.115 0.885 Dipole moment (debyes) X Y Z Total from point charges 1.504 3.887 -6.242 7.506 hybrid contribution -1.585 -1.665 -0.645 2.388 sum -0.081 2.221 -6.887 7.237 Atomic orbital electron populations 1.86554 1.17406 1.80487 1.51578 1.24085 0.84582 1.09862 0.95895 0.94609 0.90991 0.74286 0.80493 1.23788 1.07706 0.97539 1.01491 1.21110 0.98963 0.95533 0.94267 1.20303 1.06378 0.94232 0.97643 1.17578 0.78331 0.84349 0.83861 1.90864 1.47256 1.82383 1.23140 1.45575 1.56422 1.08833 1.24843 1.21136 0.99943 0.80075 0.96323 1.20559 0.94030 0.96897 0.92630 1.19449 0.95368 0.98750 0.93605 1.21284 1.00485 1.00222 0.92038 1.21416 0.95897 0.98805 0.97928 1.21451 0.96194 0.97883 0.99364 1.21377 1.00477 0.99963 0.92871 1.21127 0.95752 0.99205 0.97839 1.23759 0.94375 1.00959 0.99377 1.23408 0.80152 0.93355 1.01236 0.86145 1.92784 1.49957 1.79985 1.97692 1.23663 0.96219 0.96114 1.01427 1.25749 1.04843 1.01933 0.96002 1.98422 1.76334 1.97477 1.24294 1.83305 1.49710 1.04899 1.09452 0.74660 0.85955 1.17266 1.20126 0.80512 0.75176 0.91093 0.90476 0.84333 0.84433 0.85022 0.85297 0.85755 0.88872 0.87544 0.88366 0.88525 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 2.45 12.86 -148.98 -1.92 0.54 16 2 C -0.03 0.21 2.93 71.24 0.21 0.42 16 3 Si 0.69 -3.87 30.92 68.60 2.12 -1.74 16 4 C -0.19 0.41 5.68 24.52 0.14 0.55 16 5 C -0.07 0.13 9.75 22.69 0.22 0.35 16 6 C -0.17 -0.65 5.98 -19.84 -0.12 -0.76 16 7 C 0.57 3.49 7.79 86.55 0.67 4.16 16 8 O -0.56 -7.42 14.91 -4.22 -0.06 -7.49 16 9 N -0.70 0.46 5.17 -466.73 -2.41 -1.95 16 10 C 0.15 -0.22 4.84 86.38 0.42 0.20 16 11 C -0.04 0.18 0.63 -52.40 -0.03 0.14 16 12 C -0.07 0.21 4.51 -19.86 -0.09 0.12 16 13 C -0.12 0.49 9.05 22.27 0.20 0.69 16 14 C -0.12 0.41 10.05 22.27 0.22 0.63 16 15 C -0.13 0.25 10.05 22.27 0.22 0.48 16 16 C -0.13 0.12 10.05 22.27 0.22 0.35 16 17 C -0.12 0.13 9.34 22.27 0.21 0.34 16 18 C -0.15 0.68 6.10 31.12 0.19 0.87 16 19 C 0.05 -0.10 5.32 31.22 0.17 0.07 16 20 H 0.12 -0.46 7.61 -2.39 -0.02 -0.48 16 21 F -0.22 -1.13 17.41 44.97 0.78 -0.35 16 22 C -0.14 0.47 7.02 31.21 0.22 0.69 16 23 C -0.14 -0.73 6.87 67.35 0.46 -0.27 16 24 Cl 0.01 0.05 27.20 -2.72 -0.07 -0.02 16 25 S 0.26 0.01 20.19 -56.49 -1.14 -1.13 16 26 H 0.40 -4.99 8.74 -74.06 -0.65 -5.63 16 27 H 0.12 -1.48 7.96 -2.39 -0.02 -1.50 16 28 H -0.25 0.72 7.11 99.48 0.71 1.43 16 29 H -0.27 -0.48 7.11 99.48 0.71 0.23 16 30 H 0.18 -1.26 7.10 -2.91 -0.02 -1.28 16 31 H 0.41 -2.04 6.77 -92.71 -0.63 -2.67 16 32 H 0.07 0.03 7.97 -2.39 -0.02 0.01 16 33 H 0.08 -0.05 7.31 -2.39 -0.02 -0.07 16 34 H 0.14 -1.04 6.41 -2.91 -0.02 -1.06 16 35 H 0.14 -0.94 8.06 -2.91 -0.02 -0.97 16 36 H 0.13 -0.62 8.06 -2.91 -0.02 -0.64 16 37 H 0.13 -0.41 8.06 -2.91 -0.02 -0.43 16 38 H 0.12 -0.30 8.06 -2.91 -0.02 -0.33 16 39 H 0.09 -0.55 7.95 -2.39 -0.02 -0.57 16 40 H 0.11 -0.51 6.79 -2.39 -0.02 -0.52 16 41 H 0.10 -0.20 8.09 -2.39 -0.02 -0.22 16 42 H 0.10 -0.49 8.10 -2.39 -0.02 -0.51 16 Total: 0.00 -19.02 381.86 0.70 -18.32 By element: Atomic # 1 Polarization: -15.05 SS G_CDS: -0.14 Total: -15.20 kcal Atomic # 6 Polarization: 5.48 SS G_CDS: 3.54 Total: 9.02 kcal Atomic # 7 Polarization: 0.46 SS G_CDS: -2.41 Total: -1.95 kcal Atomic # 8 Polarization: -4.97 SS G_CDS: -1.98 Total: -6.95 kcal Atomic # 9 Polarization: -1.13 SS G_CDS: 0.78 Total: -0.35 kcal Atomic # 14 Polarization: -3.87 SS G_CDS: 2.12 Total: -1.74 kcal Atomic # 16 Polarization: 0.01 SS G_CDS: -1.14 Total: -1.13 kcal Atomic # 17 Polarization: 0.05 SS G_CDS: -0.07 Total: -0.02 kcal Total: -19.02 0.70 -18.32 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13458982_13431040.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -5.801 kcal (2) G-P(sol) polarization free energy of solvation -19.016 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -24.817 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.696 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.320 kcal (6) G-S(sol) free energy of system = (1) + (5) -24.121 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds