Wall clock time and date at job start Sat Mar 6 2021 21:28:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86300 * 109.46981 * 2 1 4 4 C 1.50700 * 109.47448 * 119.99687 * 2 1 3 5 5 C 1.34184 * 125.43608 * 65.00092 * 4 2 1 6 6 C 1.47016 * 105.95515 * 179.74029 * 5 4 2 7 7 C 1.47379 * 127.19111 * 180.26262 * 6 5 4 8 8 O 1.21606 * 120.00095 * 0.02562 * 7 6 5 9 9 N 1.34773 * 119.99651 * 179.97438 * 7 6 5 10 10 C 1.46504 * 119.99758 * 180.02562 * 9 7 6 11 11 C 1.52998 * 109.47270 * 175.11018 * 10 9 7 12 12 C 1.50700 * 112.85039 * 294.00921 * 11 10 9 13 13 C 1.38231 * 120.00165 * 113.51002 * 12 11 10 14 14 C 1.38239 * 119.99761 * 179.76843 * 13 12 11 15 15 C 1.38239 * 120.00190 * 0.48065 * 14 13 12 16 16 C 1.38242 * 119.99804 * 359.79597 * 15 14 13 17 17 C 1.38231 * 119.99622 * 359.95133 * 16 15 14 18 18 C 1.53779 * 113.61626 * 162.69705 * 11 10 9 19 19 C 1.53773 * 87.08542 * 270.88265 * 18 11 10 20 20 H 1.09007 * 113.61282 * 89.11353 * 19 18 11 21 21 F 1.39898 * 113.69505 * 220.00872 * 19 18 11 22 22 C 1.53785 * 87.08272 * 334.56559 * 19 18 11 23 23 C 1.36416 * 105.61443 * 0.25978 * 6 5 4 24 24 O 1.33649 * 108.39788 * 0.02562 * 23 6 5 25 25 H 0.96703 * 113.99696 * 299.99782 * 1 2 3 26 26 H 1.08999 * 109.47251 * 240.00007 * 2 1 3 27 27 H 1.48506 * 110.00023 * 178.68256 * 3 2 1 28 28 H 1.48500 * 110.00096 * 300.00081 * 3 2 1 29 29 H 1.08004 * 127.01804 * 0.02562 * 5 4 2 30 30 H 0.97001 * 120.00949 * 0.02562 * 9 7 6 31 31 H 1.09005 * 109.46852 * 295.10686 * 10 9 7 32 32 H 1.08999 * 109.47582 * 55.10698 * 10 9 7 33 33 H 1.07992 * 120.00228 * 359.97438 * 13 12 11 34 34 H 1.07998 * 120.00119 * 180.25354 * 14 13 12 35 35 H 1.07990 * 120.00463 * 179.76868 * 15 14 13 36 36 H 1.07998 * 120.00003 * 179.97438 * 16 15 14 37 37 H 1.08007 * 119.99496 * 180.02562 * 17 16 15 38 38 H 1.08994 * 113.61305 * 25.43782 * 18 11 10 39 39 H 1.09008 * 113.61402 * 156.33507 * 18 11 10 40 40 H 1.08993 * 113.61716 * 270.88131 * 22 19 18 41 41 H 1.09001 * 113.68841 * 139.98698 * 22 19 18 42 42 H 1.08002 * 125.79899 * 179.97438 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7103 1.2305 5 6 1.7552 -2.0122 1.5037 6 6 2.4180 -2.2475 2.7947 7 6 2.5126 -3.5222 3.5283 8 8 2.0072 -4.5278 3.0677 9 7 3.1601 -3.5735 4.7092 10 6 3.2546 -4.8408 5.4382 11 6 4.1362 -4.6534 6.6746 12 6 5.5724 -4.3546 6.3294 13 6 6.1136 -3.1194 6.6331 14 6 7.4324 -2.8470 6.3207 15 6 8.2071 -3.8063 5.6958 16 6 7.6641 -5.0395 5.3870 17 6 6.3469 -5.3137 5.7040 18 6 3.9713 -5.7662 7.7231 19 6 2.8438 -4.9167 8.3328 20 1 1.8624 -5.1221 7.9052 21 9 2.8369 -4.9121 9.7317 22 6 3.5401 -3.6918 7.7163 23 6 2.9273 -1.0394 3.1715 24 8 2.6229 -0.1410 2.2299 25 1 -0.3933 0.4417 0.7651 26 1 1.7923 -0.5138 -0.8900 27 1 3.5346 1.7703 0.0321 28 1 1.5614 2.4679 -1.2085 29 1 1.2366 -2.7396 0.8967 30 1 3.5636 -2.7716 5.0765 31 1 2.2583 -5.1575 5.7470 32 1 3.6930 -5.6005 4.7911 33 1 5.5071 -2.3684 7.1173 34 1 7.8564 -1.8834 6.5616 35 1 9.2362 -3.5922 5.4484 36 1 8.2692 -5.7889 4.8984 37 1 5.9229 -6.2774 5.4631 38 1 3.6280 -6.7125 7.3052 39 1 4.8351 -5.8803 8.3782 40 1 4.2859 -3.2388 8.3695 41 1 2.8496 -2.9626 7.2926 42 1 3.4816 -0.8422 4.0773 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13458982_13456056.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:28:40 Heat of formation + Delta-G solvation = -42.534606 kcal Electronic energy + Delta-G solvation = -28088.636628 eV Core-core repulsion = 23917.322788 eV Total energy + Delta-G solvation = -4171.313840 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 332.126 amu Computer time = 0.61 seconds Orbital eigenvalues (eV) -48.57939 -43.75475 -41.72905 -40.13518 -38.87043 -38.06618 -35.37849 -33.94965 -32.23994 -31.99262 -31.86021 -28.82676 -27.32151 -26.67225 -25.44762 -24.21739 -23.34224 -22.64351 -22.30257 -21.02057 -20.10034 -19.29080 -18.51970 -17.90133 -17.61848 -17.51188 -17.34354 -16.89058 -16.68576 -16.23724 -16.15431 -16.02028 -15.71551 -15.61330 -15.56701 -14.97095 -14.56275 -14.44000 -14.41187 -14.21049 -14.00960 -13.74455 -13.68284 -13.61817 -13.49730 -12.89787 -12.64018 -12.56464 -12.33530 -12.17044 -11.93132 -11.48172 -11.42803 -11.10477 -10.90254 -10.68462 -10.21400 -9.94998 -9.84588 -9.76979 -5.10106 0.19395 0.28615 0.36814 0.87135 1.08511 1.42831 1.73194 1.87406 1.94398 2.32330 2.69689 2.96714 3.07540 3.17175 3.25867 3.34108 3.40687 3.47878 3.56057 3.72269 3.87495 3.94188 3.96969 4.04451 4.13065 4.21800 4.32313 4.36976 4.43729 4.46966 4.51012 4.53373 4.55015 4.59364 4.66880 4.75112 4.81085 4.95168 4.99463 5.11029 5.17571 5.25501 5.44464 5.50413 5.52369 5.79581 5.95206 6.34578 6.36194 7.14671 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.029 4.029 3 Si 0.706 3.294 4 C -0.058 4.058 5 C -0.123 4.123 6 C -0.237 4.237 7 C 0.589 3.411 8 O -0.530 6.530 9 N -0.723 5.723 10 C 0.147 3.853 11 C -0.055 4.055 12 C -0.068 4.068 13 C -0.120 4.120 14 C -0.116 4.116 15 C -0.120 4.120 16 C -0.115 4.115 17 C -0.109 4.109 18 C -0.140 4.140 19 C 0.066 3.934 20 H 0.112 0.888 21 F -0.204 7.204 22 C -0.154 4.154 23 C 0.032 3.968 24 O -0.165 6.165 25 H 0.384 0.616 26 H 0.134 0.866 27 H -0.254 1.254 28 H -0.247 1.247 29 H 0.162 0.838 30 H 0.399 0.601 31 H 0.076 0.924 32 H 0.081 0.919 33 H 0.124 0.876 34 H 0.123 0.877 35 H 0.122 0.878 36 H 0.123 0.877 37 H 0.122 0.878 38 H 0.088 0.912 39 H 0.103 0.897 40 H 0.104 0.896 41 H 0.085 0.915 42 H 0.212 0.788 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.926 4.012 2.625 5.167 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.139 4.139 3 Si 0.606 3.394 4 C -0.106 4.106 5 C -0.143 4.143 6 C -0.241 4.241 7 C 0.377 3.623 8 O -0.407 6.407 9 N -0.376 5.376 10 C 0.024 3.976 11 C -0.056 4.056 12 C -0.068 4.068 13 C -0.138 4.138 14 C -0.134 4.134 15 C -0.138 4.138 16 C -0.133 4.133 17 C -0.127 4.127 18 C -0.178 4.178 19 C 0.030 3.970 20 H 0.130 0.870 21 F -0.184 7.184 22 C -0.192 4.192 23 C -0.039 4.039 24 O -0.061 6.061 25 H 0.232 0.768 26 H 0.151 0.849 27 H -0.178 1.178 28 H -0.171 1.171 29 H 0.180 0.820 30 H 0.233 0.767 31 H 0.095 0.905 32 H 0.099 0.901 33 H 0.142 0.858 34 H 0.141 0.859 35 H 0.140 0.860 36 H 0.141 0.859 37 H 0.140 0.860 38 H 0.107 0.893 39 H 0.122 0.878 40 H 0.123 0.877 41 H 0.103 0.897 42 H 0.229 0.771 Dipole moment (debyes) X Y Z Total from point charges 2.185 3.851 1.328 4.623 hybrid contribution 0.450 -0.570 0.285 0.780 sum 2.635 3.282 1.613 4.507 Atomic orbital electron populations 1.86580 1.16087 1.81733 1.49124 1.24467 0.85286 1.11364 0.92778 0.94266 0.81383 0.76546 0.87217 1.22744 1.01751 0.93470 0.92660 1.22542 1.01040 0.95360 0.95317 1.21497 1.09045 0.94238 0.99339 1.17221 0.77902 0.87200 0.80010 1.90828 1.46670 1.35677 1.67516 1.45682 1.57659 1.12417 1.21809 1.21145 0.99137 0.86307 0.91028 1.20769 0.92384 0.98714 0.93732 1.19378 0.93741 0.94398 0.99282 1.21054 0.95646 0.96360 1.00711 1.21178 0.94081 0.99520 0.98628 1.21237 1.00099 0.93778 0.98672 1.21200 0.95335 0.97154 0.99604 1.20981 0.94100 0.99186 0.98421 1.23644 0.99457 0.97831 0.96839 1.23080 1.00056 0.98075 0.75814 0.87012 1.92832 1.97935 1.97102 1.30541 1.23795 1.00597 0.97103 0.97706 1.24442 0.99346 0.86712 0.93371 1.83680 1.57297 1.38676 1.26430 0.76811 0.84924 1.17769 1.17104 0.82042 0.76703 0.90535 0.90087 0.85843 0.85866 0.85981 0.85887 0.86023 0.89304 0.87833 0.87744 0.89665 0.77120 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.30 12.88 -35.23 -0.45 -0.15 16 2 C -0.03 0.03 2.97 36.01 0.11 0.13 16 3 Si 0.71 -1.20 32.09 -169.99 -5.46 -6.66 16 4 C -0.06 -0.01 6.18 -35.74 -0.22 -0.23 16 5 C -0.12 -0.22 10.90 -37.45 -0.41 -0.63 16 6 C -0.24 -0.24 6.31 -103.28 -0.65 -0.89 16 7 C 0.59 1.31 7.81 -12.54 -0.10 1.21 16 8 O -0.53 -3.42 16.98 5.27 0.09 -3.33 16 9 N -0.72 0.90 5.17 -61.40 -0.32 0.59 16 10 C 0.15 -0.21 4.85 -4.04 -0.02 -0.23 16 11 C -0.06 0.15 0.63 -154.84 -0.10 0.05 16 12 C -0.07 0.10 4.67 -104.62 -0.49 -0.38 16 13 C -0.12 0.23 9.05 -39.58 -0.36 -0.13 16 14 C -0.12 0.15 10.05 -39.58 -0.40 -0.25 16 15 C -0.12 0.08 10.05 -39.58 -0.40 -0.32 16 16 C -0.11 0.05 10.05 -39.58 -0.40 -0.35 16 17 C -0.11 0.07 9.33 -39.58 -0.37 -0.30 16 18 C -0.14 0.32 7.00 -25.92 -0.18 0.14 16 19 C 0.07 -0.11 5.31 -25.92 -0.14 -0.25 16 20 H 0.11 -0.33 7.61 -51.92 -0.40 -0.72 16 21 F -0.20 -0.33 17.41 2.25 0.04 -0.29 16 22 C -0.15 0.48 5.97 -25.91 -0.15 0.32 16 23 C 0.03 -0.06 11.61 30.08 0.35 0.29 16 24 O -0.16 0.12 8.90 7.67 0.07 0.19 16 25 H 0.38 -1.73 8.70 45.56 0.40 -1.33 16 26 H 0.13 -0.14 7.96 -51.93 -0.41 -0.55 16 27 H -0.25 -0.29 7.11 56.52 0.40 0.11 16 28 H -0.25 -0.24 7.11 56.52 0.40 0.16 16 29 H 0.16 0.38 8.06 -52.48 -0.42 -0.05 16 30 H 0.40 -1.49 7.04 -40.82 -0.29 -1.77 16 31 H 0.08 -0.11 7.31 -51.93 -0.38 -0.49 16 32 H 0.08 -0.01 7.95 -51.93 -0.41 -0.42 16 33 H 0.12 -0.47 6.44 -52.49 -0.34 -0.81 16 34 H 0.12 -0.34 8.06 -52.49 -0.42 -0.77 16 35 H 0.12 -0.23 8.06 -52.49 -0.42 -0.66 16 36 H 0.12 -0.19 8.06 -52.49 -0.42 -0.62 16 37 H 0.12 -0.18 8.06 -52.48 -0.42 -0.60 16 38 H 0.09 -0.27 8.10 -51.93 -0.42 -0.69 16 39 H 0.10 -0.16 8.10 -51.92 -0.42 -0.58 16 40 H 0.10 -0.30 6.83 -51.93 -0.35 -0.66 16 41 H 0.08 -0.35 7.75 -51.93 -0.40 -0.76 16 42 H 0.21 -1.33 7.47 -52.49 -0.39 -1.72 16 LS Contribution 361.95 15.07 5.45 5.45 Total: 0.00 -9.31 361.95 -9.63 -18.94 By element: Atomic # 1 Polarization: -7.78 SS G_CDS: -5.13 Total: -12.92 kcal Atomic # 6 Polarization: 2.10 SS G_CDS: -3.92 Total: -1.82 kcal Atomic # 7 Polarization: 0.90 SS G_CDS: -0.32 Total: 0.59 kcal Atomic # 8 Polarization: -2.99 SS G_CDS: -0.30 Total: -3.29 kcal Atomic # 9 Polarization: -0.33 SS G_CDS: 0.04 Total: -0.29 kcal Atomic # 14 Polarization: -1.20 SS G_CDS: -5.46 Total: -6.66 kcal Total LS contribution 5.45 Total: 5.45 kcal Total: -9.31 -9.63 -18.94 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13458982_13456056.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -23.598 kcal (2) G-P(sol) polarization free energy of solvation -9.306 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -32.904 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.631 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.936 kcal (6) G-S(sol) free energy of system = (1) + (5) -42.535 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.61 seconds