Wall clock time and date at job start Sat Mar 6 2021 21:28:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.37865 * 126.45721 * 2 1 4 4 C 1.46684 * 126.23367 * 359.93466 * 3 2 1 5 5 O 1.21691 * 120.00044 * 359.97438 * 4 3 2 6 6 N 1.34776 * 119.99733 * 179.97438 * 4 3 2 7 7 C 1.46501 * 119.99685 * 179.97438 * 6 4 3 8 8 C 1.52996 * 109.47192 * 182.99149 * 7 6 4 9 9 C 1.50701 * 112.90807 * 305.69123 * 8 7 6 10 10 C 1.38229 * 120.00168 * 102.18781 * 9 8 7 11 11 C 1.38240 * 119.99734 * 179.74730 * 10 9 8 12 12 C 1.38234 * 120.00100 * 0.54561 * 11 10 9 13 13 C 1.38235 * 119.99763 * 359.70277 * 12 11 10 14 14 C 1.38233 * 120.00204 * 0.02562 * 13 12 11 15 15 C 1.53783 * 113.61595 * 174.43348 * 8 7 6 16 16 C 1.53778 * 87.08138 * 270.88443 * 15 8 7 17 17 H 1.08999 * 113.61590 * 89.20131 * 16 15 8 18 18 F 1.39904 * 113.61256 * 220.01811 * 16 15 8 19 19 C 1.53775 * 87.08303 * 334.56422 * 16 15 8 20 20 N 1.37647 * 107.53313 * 180.19040 * 3 2 1 21 21 C 1.35528 * 108.64644 * 359.62948 * 20 3 2 22 22 C 1.50697 * 125.56717 * 180.17634 * 21 20 3 23 23 O 1.42907 * 109.46906 * 120.22701 * 22 21 20 24 24 Si 1.86292 * 109.47227 * 0.23181 * 22 21 20 25 25 C 1.35453 * 108.86931 * 0.37792 * 21 20 3 26 26 H 1.09001 * 109.47226 * 89.99986 * 1 2 3 27 27 H 1.09004 * 109.47573 * 209.99928 * 1 2 3 28 28 H 1.08996 * 109.47144 * 329.99450 * 1 2 3 29 29 H 0.96999 * 120.00454 * 359.97438 * 6 4 3 30 30 H 1.08997 * 109.47230 * 62.98597 * 7 6 4 31 31 H 1.09004 * 109.46719 * 302.98868 * 7 6 4 32 32 H 1.08001 * 120.00482 * 359.97438 * 10 9 8 33 33 H 1.08001 * 119.99880 * 180.26868 * 11 10 9 34 34 H 1.07995 * 120.00211 * 179.72977 * 12 11 10 35 35 H 1.08003 * 120.00319 * 179.97438 * 13 12 11 36 36 H 1.08007 * 120.00323 * 179.97438 * 14 13 12 37 37 H 1.09002 * 113.61342 * 25.43544 * 15 8 7 38 38 H 1.08999 * 113.61153 * 156.33230 * 15 8 7 39 39 H 1.08994 * 113.62110 * 270.88184 * 19 16 15 40 40 H 1.09005 * 113.60876 * 139.97898 * 19 16 15 41 41 H 0.97004 * 125.68013 * 179.73978 * 20 3 2 42 42 H 1.09000 * 109.47659 * 240.22450 * 22 21 20 43 43 H 0.96695 * 113.99958 * 300.00245 * 23 22 21 44 44 H 1.48508 * 110.00301 * 179.97438 * 24 22 21 45 45 H 1.48507 * 110.00013 * 301.31591 * 24 22 21 46 46 H 1.08005 * 126.06517 * 179.78789 * 25 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3262 1.1088 0.0000 4 6 1.8898 2.5093 -0.0013 5 8 0.7026 2.7766 -0.0031 6 7 2.8037 3.4998 -0.0007 7 6 2.3678 4.8985 -0.0026 8 6 3.5914 5.8140 -0.0766 9 6 4.5995 5.5346 1.0083 10 6 5.7455 4.8180 0.7190 11 6 6.6727 4.5664 1.7130 12 6 6.4483 5.0216 2.9988 13 6 5.2997 5.7338 3.2892 14 6 4.3752 5.9903 2.2940 15 6 3.2384 7.3038 -0.2208 16 6 3.2489 7.0781 -1.7419 17 1 2.2831 6.7730 -2.1447 18 9 3.8296 8.1288 -2.4604 19 6 4.2086 5.9050 -1.4822 20 7 3.6283 0.6624 -0.0044 21 6 3.6218 -0.6928 0.0013 22 6 4.8433 -1.5753 0.0029 23 8 4.8342 -2.3992 1.1705 24 14 6.3752 -0.5152 0.0030 25 6 2.3379 -1.1247 0.0007 26 1 -0.3634 0.0000 -1.0277 27 1 -0.3634 -0.8900 0.5138 28 1 -0.3633 0.8899 0.5139 29 1 3.7500 3.2868 0.0011 30 1 1.8125 5.1073 0.9118 31 1 1.7269 5.0781 -0.8658 32 1 5.9185 4.4579 -0.2844 33 1 7.5702 4.0102 1.4860 34 1 7.1705 4.8212 3.7763 35 1 5.1241 6.0892 4.2939 36 1 3.4776 6.5464 2.5210 37 1 2.2560 7.5601 0.1759 38 1 4.0244 7.9743 0.1266 39 1 5.2598 6.1931 -1.4798 40 1 4.0093 5.0321 -2.1039 41 1 4.4190 1.2243 -0.0089 42 1 4.8376 -2.2054 -0.8865 43 1 4.8386 -1.9042 2.0012 44 1 7.5870 -1.3736 0.0052 45 1 6.3809 0.3693 -1.1900 46 1 2.0136 -2.1549 0.0012 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13458982_13940406.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:28:43 Heat of formation + Delta-G solvation = -17.230742 kcal Electronic energy + Delta-G solvation = -30726.330913 eV Core-core repulsion = 26498.295374 eV Total energy + Delta-G solvation = -4228.035539 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.153 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -48.59972 -42.67022 -41.53980 -40.02879 -38.73729 -37.71468 -35.60798 -33.65419 -32.04609 -31.83378 -31.52623 -28.91173 -28.32017 -27.15995 -26.47796 -24.91307 -23.22137 -22.63311 -22.36576 -21.63810 -20.73372 -20.05325 -19.33184 -18.33867 -17.88248 -17.49989 -16.98376 -16.77702 -16.68995 -16.49230 -16.22790 -16.01863 -15.60878 -15.47703 -15.30756 -14.99368 -14.94206 -14.64367 -14.27395 -14.23703 -14.14854 -14.00654 -13.66468 -13.59536 -13.55560 -13.44745 -13.32223 -12.97883 -12.57466 -12.51421 -12.40231 -12.21652 -12.19686 -11.81845 -11.34874 -11.27741 -11.12908 -10.56278 -10.30952 -9.83940 -9.80716 -9.63509 -9.20387 -5.17039 0.25693 0.42594 0.51008 1.11313 1.43079 1.57407 1.78291 1.90223 2.02764 2.23896 2.84382 3.11216 3.21811 3.40147 3.41635 3.51414 3.59813 3.67709 3.79337 3.86848 4.11719 4.13087 4.14657 4.21164 4.26068 4.33826 4.41041 4.49747 4.59673 4.64075 4.67722 4.70097 4.70993 4.72718 4.82434 4.84589 4.87705 4.92608 5.10368 5.11277 5.17153 5.22010 5.25644 5.35878 5.60351 5.62177 5.65209 5.67971 5.83021 6.11886 6.23821 6.40971 6.68887 7.02704 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.089 4.089 2 C -0.088 4.088 3 C -0.063 4.063 4 C 0.590 3.410 5 O -0.558 6.558 6 N -0.714 5.714 7 C 0.148 3.852 8 C -0.043 4.043 9 C -0.074 4.074 10 C -0.131 4.131 11 C -0.119 4.119 12 C -0.129 4.129 13 C -0.127 4.127 14 C -0.120 4.120 15 C -0.137 4.137 16 C 0.053 3.947 17 H 0.124 0.876 18 F -0.224 7.224 19 C -0.147 4.147 20 N -0.520 5.520 21 C 0.030 3.970 22 C -0.048 4.048 23 O -0.546 6.546 24 Si 0.758 3.242 25 C -0.190 4.190 26 H 0.065 0.935 27 H 0.074 0.926 28 H 0.065 0.935 29 H 0.405 0.595 30 H 0.074 0.926 31 H 0.080 0.920 32 H 0.137 0.863 33 H 0.144 0.856 34 H 0.134 0.866 35 H 0.129 0.871 36 H 0.125 0.875 37 H 0.098 0.902 38 H 0.098 0.902 39 H 0.103 0.897 40 H 0.092 0.908 41 H 0.424 0.576 42 H 0.125 0.875 43 H 0.397 0.603 44 H -0.285 1.285 45 H -0.264 1.264 46 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.991 0.694 2.807 5.768 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.146 4.146 2 C -0.097 4.097 3 C -0.175 4.175 4 C 0.378 3.622 5 O -0.437 6.437 6 N -0.366 5.366 7 C 0.025 3.975 8 C -0.043 4.043 9 C -0.074 4.074 10 C -0.148 4.148 11 C -0.137 4.137 12 C -0.146 4.146 13 C -0.145 4.145 14 C -0.138 4.138 15 C -0.175 4.175 16 C 0.018 3.982 17 H 0.141 0.859 18 F -0.205 7.205 19 C -0.184 4.184 20 N -0.122 5.122 21 C -0.088 4.088 22 C -0.158 4.158 23 O -0.353 6.353 24 Si 0.660 3.340 25 C -0.215 4.215 26 H 0.084 0.916 27 H 0.093 0.907 28 H 0.084 0.916 29 H 0.241 0.759 30 H 0.092 0.908 31 H 0.098 0.902 32 H 0.155 0.845 33 H 0.162 0.838 34 H 0.152 0.848 35 H 0.147 0.853 36 H 0.143 0.857 37 H 0.116 0.884 38 H 0.117 0.883 39 H 0.121 0.879 40 H 0.110 0.890 41 H 0.265 0.735 42 H 0.143 0.857 43 H 0.247 0.753 44 H -0.211 1.211 45 H -0.190 1.190 46 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges 5.009 0.831 1.930 5.432 hybrid contribution 0.270 -0.099 -0.331 0.439 sum 5.279 0.732 1.599 5.564 Atomic orbital electron populations 1.20322 0.89320 1.02817 1.02188 1.20210 0.96274 0.91387 1.01865 1.20051 0.84198 0.93063 1.20232 1.17095 0.85536 0.83485 0.76072 1.90829 1.17374 1.83666 1.51781 1.45672 1.09650 1.05929 1.75373 1.21168 0.94559 0.78596 1.03216 1.20596 0.94038 0.95734 0.93957 1.19461 0.95328 0.99011 0.93640 1.21273 0.93917 0.99365 1.00282 1.21460 0.99717 0.99725 0.92803 1.21476 0.97630 0.97881 0.97657 1.21403 0.94630 0.98713 0.99794 1.21132 0.99791 1.00235 0.92684 1.23628 1.04690 0.94723 0.94451 1.23388 0.98200 0.85197 0.91448 0.85887 1.92788 1.86435 1.60669 1.80607 1.23753 1.00645 0.98867 0.95152 1.41889 1.06816 1.06316 1.57167 1.21019 0.97766 0.82788 1.07196 1.24797 1.01159 0.97717 0.92165 1.86531 1.96770 1.35897 1.16125 0.94444 0.73677 0.80223 0.85612 1.20749 0.91211 0.99043 1.10469 0.91583 0.90733 0.91646 0.75927 0.90803 0.90196 0.84484 0.83782 0.84797 0.85328 0.85749 0.88389 0.88349 0.87877 0.88989 0.73482 0.85737 0.75302 1.21090 1.18991 0.83431 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.50 9.83 71.24 0.70 0.20 16 2 C -0.09 -0.48 6.21 -19.57 -0.12 -0.60 16 3 C -0.06 -0.20 7.06 40.35 0.28 0.09 16 4 C 0.59 2.68 7.79 86.45 0.67 3.35 16 5 O -0.56 -6.53 14.80 -4.32 -0.06 -6.60 16 6 N -0.71 1.70 5.35 -467.08 -2.50 -0.80 16 7 C 0.15 -0.48 4.96 86.38 0.43 -0.05 16 8 C -0.04 0.25 0.73 -52.40 -0.04 0.21 16 9 C -0.07 0.36 4.23 -19.87 -0.08 0.28 16 10 C -0.13 0.88 8.10 22.27 0.18 1.06 16 11 C -0.12 0.80 10.05 22.27 0.22 1.02 16 12 C -0.13 0.62 10.05 22.27 0.22 0.84 16 13 C -0.13 0.42 10.05 22.27 0.22 0.64 16 14 C -0.12 0.39 9.38 22.27 0.21 0.60 16 15 C -0.14 0.68 6.75 31.12 0.21 0.89 16 16 C 0.05 -0.16 5.31 31.12 0.17 0.00 16 17 H 0.12 -0.68 7.61 -2.39 -0.02 -0.70 16 18 F -0.22 -0.92 17.41 44.97 0.78 -0.14 16 19 C -0.15 0.85 6.09 31.12 0.19 1.04 16 20 N -0.52 1.65 5.47 -171.94 -0.94 0.71 16 21 C 0.03 -0.04 6.11 41.34 0.25 0.21 16 22 C -0.05 0.20 2.98 71.23 0.21 0.42 16 23 O -0.55 1.59 12.87 -148.98 -1.92 -0.32 16 24 Si 0.76 -5.83 30.96 68.60 2.12 -3.71 16 25 C -0.19 -0.53 10.64 22.01 0.23 -0.30 16 26 H 0.07 0.36 8.14 -2.39 -0.02 0.35 16 27 H 0.07 0.21 8.14 -2.38 -0.02 0.19 16 28 H 0.06 0.59 6.49 -2.39 -0.02 0.57 16 29 H 0.40 -2.74 6.25 -92.71 -0.58 -3.32 16 30 H 0.07 -0.11 8.14 -2.39 -0.02 -0.13 16 31 H 0.08 -0.21 7.31 -2.38 -0.02 -0.23 16 32 H 0.14 -1.43 7.06 -2.91 -0.02 -1.45 16 33 H 0.14 -1.58 8.06 -2.91 -0.02 -1.60 16 34 H 0.13 -1.01 8.06 -2.91 -0.02 -1.04 16 35 H 0.13 -0.67 8.06 -2.91 -0.02 -0.69 16 36 H 0.12 -0.55 8.02 -2.91 -0.02 -0.57 16 37 H 0.10 -0.66 8.10 -2.39 -0.02 -0.68 16 38 H 0.10 -0.34 8.09 -2.39 -0.02 -0.36 16 39 H 0.10 -0.55 7.48 -2.39 -0.02 -0.57 16 40 H 0.09 -0.66 8.10 -2.38 -0.02 -0.68 16 41 H 0.42 -3.88 5.98 -92.71 -0.55 -4.44 16 42 H 0.13 -0.45 7.96 -2.39 -0.02 -0.47 16 43 H 0.40 -4.20 8.70 -74.06 -0.64 -4.84 16 44 H -0.28 -0.02 7.11 99.48 0.71 0.69 16 45 H -0.26 1.35 7.11 99.48 0.71 2.06 16 46 H 0.15 0.29 8.06 -2.91 -0.02 0.26 16 Total: 0.00 -19.57 381.21 0.95 -18.62 By element: Atomic # 1 Polarization: -16.94 SS G_CDS: -0.71 Total: -17.64 kcal Atomic # 6 Polarization: 5.72 SS G_CDS: 4.17 Total: 9.89 kcal Atomic # 7 Polarization: 3.35 SS G_CDS: -3.44 Total: -0.09 kcal Atomic # 8 Polarization: -4.94 SS G_CDS: -1.98 Total: -6.92 kcal Atomic # 9 Polarization: -0.92 SS G_CDS: 0.78 Total: -0.14 kcal Atomic # 14 Polarization: -5.83 SS G_CDS: 2.12 Total: -3.71 kcal Total: -19.57 0.95 -18.62 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13458982_13940406.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 1.386 kcal (2) G-P(sol) polarization free energy of solvation -19.565 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -18.179 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.949 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.617 kcal (6) G-S(sol) free energy of system = (1) + (5) -17.231 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds