Wall clock time and date at job start Sat Mar 6 2021 21:28:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86307 * 109.46899 * 2 1 4 4 C 1.50693 * 109.47377 * 240.00099 * 2 1 3 5 5 C 1.34852 * 125.89604 * 120.04121 * 4 2 1 6 6 C 1.40889 * 107.41678 * 179.73549 * 5 4 2 7 7 C 1.34848 * 107.41987 * 0.37556 * 6 5 4 8 8 C 1.50698 * 125.89168 * 179.88550 * 7 6 5 9 9 C 1.50690 * 109.47304 * 274.69415 * 8 7 6 10 10 O 1.21287 * 120.00245 * 359.97438 * 9 8 7 11 11 N 1.34779 * 120.00301 * 179.97438 * 9 8 7 12 12 C 1.46501 * 120.00319 * 180.02562 * 11 9 8 13 13 C 1.52996 * 109.47246 * 184.61975 * 12 11 9 14 14 C 1.50700 * 112.85055 * 62.70264 * 13 12 11 15 15 C 1.38228 * 120.00209 * 235.47794 * 14 13 12 16 16 C 1.38242 * 119.99979 * 180.23497 * 15 14 13 17 17 C 1.38236 * 119.99996 * 359.49036 * 16 15 14 18 18 C 1.38230 * 119.99611 * 0.25866 * 17 16 15 19 19 C 1.38237 * 119.99665 * 55.20942 * 14 13 12 20 20 C 1.53782 * 113.61109 * 291.51032 * 13 12 11 21 21 C 1.53777 * 87.08140 * 270.79917 * 20 13 12 22 22 H 1.08992 * 113.61564 * 89.12047 * 21 20 13 23 23 F 1.39900 * 113.61661 * 219.93649 * 21 20 13 24 24 C 1.53780 * 113.68964 * 193.97513 * 13 12 11 25 25 N 1.36345 * 108.21688 * 359.62507 * 7 6 5 26 26 H 0.96697 * 113.99855 * 59.99939 * 1 2 3 27 27 H 1.09001 * 109.47125 * 119.99553 * 2 1 3 28 28 H 1.48495 * 110.00157 * 59.99851 * 3 2 1 29 29 H 1.48504 * 109.99860 * 181.32000 * 3 2 1 30 30 H 1.07997 * 126.28611 * 359.93914 * 5 4 2 31 31 H 1.08005 * 126.28956 * 180.24408 * 6 5 4 32 32 H 1.08999 * 109.47059 * 154.68920 * 8 7 6 33 33 H 1.09005 * 109.46729 * 34.69730 * 8 7 6 34 34 H 0.96998 * 119.99617 * 359.97438 * 11 9 8 35 35 H 1.08995 * 109.47209 * 64.61563 * 12 11 9 36 36 H 1.08998 * 109.46808 * 304.61858 * 12 11 9 37 37 H 1.07997 * 120.00542 * 0.02562 * 15 14 13 38 38 H 1.08000 * 120.00006 * 179.76885 * 16 15 14 39 39 H 1.07996 * 119.99832 * 180.27731 * 17 16 15 40 40 H 1.08007 * 119.99794 * 180.02562 * 18 17 16 41 41 H 1.07999 * 119.99939 * 359.97438 * 19 14 13 42 42 H 1.08996 * 113.61922 * 25.35345 * 20 13 12 43 43 H 1.09006 * 113.61104 * 156.16624 * 20 13 12 44 44 H 1.09003 * 113.61478 * 203.66815 * 24 13 12 45 45 H 1.08997 * 113.61685 * 334.57866 * 24 13 12 46 46 H 0.97002 * 125.63292 * 180.26295 * 25 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7103 -1.2304 5 6 2.7106 -0.1729 -2.1909 6 6 2.9504 -1.1766 -3.1501 7 6 2.3017 -2.2868 -2.7435 8 6 2.2768 -3.6096 -3.4650 9 6 1.1847 -3.5950 -4.5032 10 8 0.4941 -2.6078 -4.6432 11 7 0.9752 -4.6790 -5.2762 12 6 -0.0861 -4.6647 -6.2860 13 6 -0.1874 -6.0445 -6.9392 14 6 -0.5707 -7.1272 -5.9635 15 6 0.2308 -8.2443 -5.8207 16 6 -0.1234 -9.2397 -4.9292 17 6 -1.2736 -9.1130 -4.1728 18 6 -2.0722 -7.9933 -4.3119 19 6 -1.7209 -7.0004 -5.2072 20 6 1.0270 -6.4034 -7.8118 21 6 0.2834 -5.7383 -8.9821 22 1 0.4835 -4.6711 -9.0764 23 9 0.4167 -6.4251 -10.1936 24 6 -1.0206 -6.0566 -8.2316 25 7 1.6772 -2.0076 -1.5641 26 1 -0.3933 0.4417 -0.7650 27 1 1.7924 -0.5138 0.8900 28 1 1.5615 2.4680 1.2084 29 1 3.5346 1.7704 -0.0321 30 1 3.0850 0.8397 -2.2179 31 1 3.5429 -1.0749 -4.0473 32 1 2.0876 -4.4100 -2.7497 33 1 3.2381 -3.7765 -3.9510 34 1 1.5277 -5.4684 -5.1645 35 1 0.1457 -3.9189 -7.0462 36 1 -1.0356 -4.4168 -5.8115 37 1 1.1319 -8.3412 -6.4081 38 1 0.5008 -10.1143 -4.8204 39 1 -1.5479 -9.8885 -3.4732 40 1 -2.9706 -7.8941 -3.7206 41 1 -2.3445 -6.1253 -5.3153 42 1 1.9408 -5.8840 -7.5234 43 1 1.1719 -7.4764 -7.9382 44 1 -1.4362 -7.0347 -8.4740 45 1 -1.7598 -5.2572 -8.2821 46 1 1.1408 -2.6294 -1.0477 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13458982_14644196.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:28:47 Heat of formation + Delta-G solvation = -18.955119 kcal Electronic energy + Delta-G solvation = -29738.871925 eV Core-core repulsion = 25510.761612 eV Total energy + Delta-G solvation = -4228.110313 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.153 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -48.57206 -42.29596 -41.70595 -40.18862 -38.87792 -37.64545 -35.30340 -33.19486 -32.16763 -31.98714 -31.84617 -29.83574 -28.18910 -27.23706 -25.41525 -24.74772 -23.38567 -22.62478 -21.84948 -21.27843 -20.99768 -20.06382 -18.90518 -18.59692 -18.06728 -17.61715 -17.20795 -16.70980 -16.63784 -16.43852 -16.23827 -16.02816 -15.70104 -15.58602 -15.26143 -15.10963 -14.65938 -14.63620 -14.54244 -14.45022 -14.07854 -14.02683 -13.87227 -13.75891 -13.70579 -13.58372 -13.31886 -12.78318 -12.61569 -12.58118 -12.31617 -11.99216 -11.88211 -11.86511 -11.47213 -11.41904 -10.91821 -10.59267 -10.15355 -9.95734 -9.77160 -9.70659 -8.88733 -4.93538 0.27564 0.36285 1.15441 1.31795 1.62562 1.71228 1.91104 1.97114 2.25166 2.50517 2.69371 2.98764 3.11004 3.26134 3.41206 3.48334 3.48771 3.63771 3.72571 3.85246 3.90700 3.95324 3.97893 3.99650 4.06913 4.12017 4.34388 4.36418 4.43996 4.46112 4.46975 4.50894 4.54036 4.59297 4.60689 4.68327 4.81150 4.83085 4.94832 4.99215 5.12350 5.29439 5.33048 5.36221 5.44468 5.50848 5.51831 5.94559 6.06494 6.20929 6.38553 6.56091 6.67154 7.18628 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.050 4.050 3 Si 0.720 3.280 4 C -0.010 4.010 5 C -0.188 4.188 6 C -0.173 4.173 7 C 0.036 3.964 8 C -0.072 4.072 9 C 0.513 3.487 10 O -0.522 6.522 11 N -0.728 5.728 12 C 0.147 3.853 13 C -0.054 4.054 14 C -0.068 4.068 15 C -0.119 4.119 16 C -0.116 4.116 17 C -0.120 4.120 18 C -0.116 4.116 19 C -0.108 4.108 20 C -0.155 4.155 21 C 0.066 3.934 22 H 0.112 0.888 23 F -0.204 7.204 24 C -0.140 4.140 25 N -0.535 5.535 26 H 0.383 0.617 27 H 0.109 0.891 28 H -0.256 1.256 29 H -0.255 1.255 30 H 0.141 0.859 31 H 0.136 0.864 32 H 0.099 0.901 33 H 0.117 0.883 34 H 0.402 0.598 35 H 0.074 0.926 36 H 0.078 0.922 37 H 0.126 0.874 38 H 0.123 0.877 39 H 0.122 0.878 40 H 0.122 0.878 41 H 0.121 0.879 42 H 0.086 0.914 43 H 0.104 0.896 44 H 0.102 0.898 45 H 0.088 0.912 46 H 0.412 0.588 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.050 -2.653 -0.550 2.906 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.353 6.353 2 C -0.160 4.160 3 Si 0.620 3.380 4 C -0.124 4.124 5 C -0.213 4.213 6 C -0.198 4.198 7 C -0.078 4.078 8 C -0.113 4.113 9 C 0.298 3.702 10 O -0.396 6.396 11 N -0.381 5.381 12 C 0.023 3.977 13 C -0.055 4.055 14 C -0.068 4.068 15 C -0.137 4.137 16 C -0.134 4.134 17 C -0.138 4.138 18 C -0.134 4.134 19 C -0.126 4.126 20 C -0.193 4.193 21 C 0.029 3.971 22 H 0.130 0.870 23 F -0.184 7.184 24 C -0.178 4.178 25 N -0.130 5.130 26 H 0.230 0.770 27 H 0.127 0.873 28 H -0.181 1.181 29 H -0.179 1.179 30 H 0.159 0.841 31 H 0.154 0.846 32 H 0.117 0.883 33 H 0.135 0.865 34 H 0.236 0.764 35 H 0.093 0.907 36 H 0.096 0.904 37 H 0.144 0.856 38 H 0.141 0.859 39 H 0.140 0.860 40 H 0.141 0.859 41 H 0.139 0.861 42 H 0.104 0.896 43 H 0.123 0.877 44 H 0.121 0.879 45 H 0.106 0.894 46 H 0.249 0.751 Dipole moment (debyes) X Y Z Total from point charges 1.024 -1.743 0.384 2.058 hybrid contribution 0.014 -1.622 0.329 1.655 sum 1.038 -3.365 0.713 3.593 Atomic orbital electron populations 1.86463 1.17361 1.81856 1.49583 1.24839 0.84985 1.10692 0.95492 0.93951 0.80856 0.76649 0.86548 1.20835 1.05946 0.85413 1.00158 1.20648 1.04687 0.99900 0.96048 1.20581 1.05649 0.92351 1.01180 1.19458 1.02241 0.96448 0.89608 1.20117 0.99715 0.94756 0.96667 1.20557 0.85067 0.82706 0.81859 1.90774 1.47670 1.32574 1.68625 1.45868 1.36879 1.17385 1.37987 1.21099 0.91861 0.93938 0.90806 1.20760 0.97999 0.93714 0.93022 1.19370 0.95500 0.94921 0.97045 1.21128 0.99872 0.93736 0.98987 1.21189 0.97092 0.98871 0.96281 1.21234 0.95084 0.97995 0.99495 1.21192 0.99762 0.94069 0.98395 1.20975 0.96516 0.99088 0.96057 1.23817 0.97713 1.03111 0.94649 1.23090 0.97848 0.96756 0.79356 0.87021 1.92831 1.96524 1.81515 1.47573 1.23649 0.96892 1.04582 0.92673 1.41788 1.40929 1.11015 1.19237 0.76962 0.87336 1.18085 1.17903 0.84130 0.84597 0.88319 0.86522 0.76402 0.90748 0.90416 0.85642 0.85881 0.85999 0.85949 0.86139 0.89568 0.87737 0.87919 0.89365 0.75127 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.63 12.88 -35.23 -0.45 -1.09 16 2 C -0.05 -0.03 3.08 36.00 0.11 0.08 16 3 Si 0.72 -0.31 30.59 -169.99 -5.20 -5.51 16 4 C -0.01 -0.02 6.50 -81.79 -0.53 -0.55 16 5 C -0.19 -0.36 9.37 -39.78 -0.37 -0.74 16 6 C -0.17 -0.38 10.76 -39.78 -0.43 -0.81 16 7 C 0.04 0.05 5.66 -81.79 -0.46 -0.42 16 8 C -0.07 0.13 6.24 -29.04 -0.18 -0.06 16 9 C 0.51 0.17 7.82 -10.99 -0.09 0.09 16 10 O -0.52 -2.50 16.03 5.55 0.09 -2.42 16 11 N -0.73 1.55 5.25 -60.30 -0.32 1.24 16 12 C 0.15 -0.26 4.73 -4.04 -0.02 -0.28 16 13 C -0.05 0.15 0.67 -154.85 -0.10 0.04 16 14 C -0.07 0.11 4.60 -104.63 -0.48 -0.37 16 15 C -0.12 0.20 9.14 -39.58 -0.36 -0.16 16 16 C -0.12 0.14 10.05 -39.58 -0.40 -0.26 16 17 C -0.12 0.09 10.05 -39.58 -0.40 -0.31 16 18 C -0.12 0.06 10.05 -39.58 -0.40 -0.33 16 19 C -0.11 0.08 9.31 -39.58 -0.37 -0.29 16 20 C -0.16 0.46 6.30 -25.92 -0.16 0.30 16 21 C 0.07 -0.11 5.32 -25.92 -0.14 -0.25 16 22 H 0.11 -0.32 7.60 -51.93 -0.39 -0.72 16 23 F -0.20 -0.35 17.41 2.25 0.04 -0.31 16 24 C -0.14 0.30 7.12 -25.92 -0.18 0.12 16 25 N -0.54 -0.68 6.07 -5.44 -0.03 -0.71 16 26 H 0.38 -0.74 8.70 45.56 0.40 -0.35 16 27 H 0.11 0.07 7.96 -51.93 -0.41 -0.34 16 28 H -0.26 -0.61 7.11 56.52 0.40 -0.21 16 29 H -0.25 -0.47 7.11 56.52 0.40 -0.07 16 30 H 0.14 0.03 6.22 -52.49 -0.33 -0.30 16 31 H 0.14 0.13 8.06 -52.48 -0.42 -0.29 16 32 H 0.10 -0.36 8.14 -51.93 -0.42 -0.78 16 33 H 0.12 -0.45 8.14 -51.93 -0.42 -0.87 16 34 H 0.40 -1.62 8.24 -40.82 -0.34 -1.96 16 35 H 0.07 -0.12 7.31 -51.93 -0.38 -0.50 16 36 H 0.08 -0.04 7.37 -51.93 -0.38 -0.42 16 37 H 0.13 -0.40 5.95 -52.49 -0.31 -0.71 16 38 H 0.12 -0.32 8.06 -52.49 -0.42 -0.74 16 39 H 0.12 -0.25 8.06 -52.49 -0.42 -0.67 16 40 H 0.12 -0.21 8.06 -52.48 -0.42 -0.63 16 41 H 0.12 -0.16 7.48 -52.49 -0.39 -0.55 16 42 H 0.09 -0.33 8.04 -51.93 -0.42 -0.75 16 43 H 0.10 -0.29 6.23 -51.93 -0.32 -0.61 16 44 H 0.10 -0.14 8.09 -51.93 -0.42 -0.56 16 45 H 0.09 -0.25 8.10 -51.93 -0.42 -0.67 16 46 H 0.41 -0.09 8.96 -40.82 -0.37 -0.45 16 LS Contribution 383.98 15.07 5.79 5.79 Total: 0.00 -9.08 383.98 -11.28 -20.35 By element: Atomic # 1 Polarization: -6.93 SS G_CDS: -6.22 Total: -13.15 kcal Atomic # 6 Polarization: 0.77 SS G_CDS: -4.97 Total: -4.20 kcal Atomic # 7 Polarization: 0.88 SS G_CDS: -0.35 Total: 0.53 kcal Atomic # 8 Polarization: -3.14 SS G_CDS: -0.36 Total: -3.50 kcal Atomic # 9 Polarization: -0.35 SS G_CDS: 0.04 Total: -0.31 kcal Atomic # 14 Polarization: -0.31 SS G_CDS: -5.20 Total: -5.51 kcal Total LS contribution 5.79 Total: 5.79 kcal Total: -9.08 -11.28 -20.35 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13458982_14644196.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 1.398 kcal (2) G-P(sol) polarization free energy of solvation -9.076 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -7.678 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.277 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.353 kcal (6) G-S(sol) free energy of system = (1) + (5) -18.955 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds