Wall clock time and date at job start Sat Mar 6 2021 21:28:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86297 * 109.47226 * 2 1 4 4 C 1.50697 * 109.46673 * 239.99704 * 2 1 3 5 5 C 1.31117 * 118.54384 * 120.00865 * 4 2 1 6 6 N 1.38929 * 121.84659 * 180.14304 * 5 4 2 7 7 C 1.47028 * 118.88414 * 346.65793 * 6 5 4 8 8 C 1.50700 * 109.82114 * 163.20316 * 7 6 5 9 9 O 1.21277 * 120.00370 * 340.00085 * 8 7 6 10 10 N 1.34780 * 119.99699 * 159.99840 * 8 7 6 11 11 C 1.46505 * 119.99787 * 180.02562 * 10 8 7 12 12 C 1.52998 * 109.47080 * 175.10951 * 11 10 8 13 13 C 1.50694 * 112.84931 * 294.00604 * 12 11 10 14 14 C 1.38241 * 120.00071 * 113.51576 * 13 12 11 15 15 C 1.38233 * 119.99986 * 179.78991 * 14 13 12 16 16 C 1.38228 * 119.99980 * 0.45948 * 15 14 13 17 17 C 1.38240 * 120.00337 * 359.77073 * 16 15 14 18 18 C 1.38231 * 119.99575 * 0.02562 * 17 16 15 19 19 C 1.53777 * 113.61384 * 162.69885 * 12 11 10 20 20 C 1.53775 * 87.08624 * 270.88317 * 19 12 11 21 21 H 1.09003 * 113.61398 * 89.11350 * 20 19 12 22 22 F 1.39891 * 113.69394 * 220.00901 * 20 19 12 23 23 C 1.53784 * 113.61664 * 65.20350 * 12 11 10 24 24 C 1.53547 * 107.65744 * 43.66602 * 7 6 5 25 25 C 1.50203 * 118.54647 * 299.73298 * 4 2 1 26 26 H 0.96705 * 113.99445 * 59.99819 * 1 2 3 27 27 H 1.09001 * 109.46499 * 119.99741 * 2 1 3 28 28 H 1.48504 * 109.99827 * 298.67439 * 3 2 1 29 29 H 1.48496 * 110.00217 * 60.00036 * 3 2 1 30 30 H 1.07997 * 119.07654 * 0.11438 * 5 4 2 31 31 H 0.96996 * 120.55541 * 166.63713 * 6 5 4 32 32 H 1.08998 * 109.82220 * 284.12780 * 7 6 5 33 33 H 0.97004 * 120.00249 * 0.02562 * 10 8 7 34 34 H 1.09002 * 109.46765 * 295.10645 * 11 10 8 35 35 H 1.09002 * 109.46929 * 55.10608 * 11 10 8 36 36 H 1.07999 * 119.99455 * 359.97438 * 14 13 12 37 37 H 1.08003 * 119.99697 * 180.24853 * 15 14 13 38 38 H 1.08005 * 120.00077 * 179.79064 * 16 15 14 39 39 H 1.08001 * 119.99994 * 179.97438 * 17 16 15 40 40 H 1.07999 * 119.99834 * 179.97438 * 18 17 16 41 41 H 1.09005 * 113.61395 * 25.43736 * 19 12 11 42 42 H 1.09003 * 113.61800 * 156.33390 * 19 12 11 43 43 H 1.08989 * 113.61572 * 203.66384 * 23 12 11 44 44 H 1.09005 * 113.61292 * 334.48315 * 23 12 11 45 45 H 1.08997 * 109.62047 * 58.77377 * 24 7 6 46 46 H 1.09006 * 109.61848 * 179.33182 * 24 7 6 47 47 H 1.09006 * 109.33425 * 280.48887 * 25 4 2 48 48 H 1.08998 * 109.33356 * 39.97765 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 -1.2304 5 6 2.6832 -0.0461 -2.0745 6 7 3.1807 -0.6325 -3.2315 7 6 3.1107 -2.0942 -3.3736 8 6 3.3089 -2.4773 -4.8176 9 8 3.1310 -1.6566 -5.6927 10 7 3.6838 -3.7320 -5.1365 11 6 3.8770 -4.1043 -6.5402 12 6 4.4146 -5.5345 -6.6192 13 6 5.7989 -5.6721 -6.0398 14 6 5.9974 -6.4188 -4.8935 15 6 7.2679 -6.5486 -4.3645 16 6 8.3384 -5.9240 -4.9764 17 6 8.1393 -5.1733 -6.1200 18 6 6.8695 -5.0470 -6.6514 19 6 4.2598 -6.1750 -8.0087 20 6 2.8780 -6.6634 -7.5431 21 1 2.0749 -5.9530 -7.7394 22 9 2.5697 -7.9616 -7.9632 23 6 3.4244 -6.5940 -6.1073 24 6 1.7196 -2.5418 -2.9024 25 6 1.5535 -2.1501 -1.4324 26 1 -0.3932 0.4418 -0.7651 27 1 1.7923 -0.5138 0.8900 28 1 1.5881 2.4584 -1.2244 29 1 1.5616 2.4679 1.2084 30 1 2.9221 0.9860 -1.8646 31 1 3.5675 -0.0867 -3.9339 32 1 3.8781 -2.5626 -2.7575 33 1 3.8257 -4.3885 -4.4366 34 1 2.9242 -4.0447 -7.0663 35 1 4.5904 -3.4219 -7.0022 36 1 5.1602 -6.9032 -4.4130 37 1 7.4235 -7.1353 -3.4712 38 1 9.3306 -6.0226 -4.5612 39 1 8.9757 -4.6850 -6.5979 40 1 6.7138 -4.4603 -7.5446 41 1 4.2157 -5.4497 -8.8213 42 1 4.9670 -6.9823 -8.1986 43 1 3.9033 -7.5158 -5.7774 44 1 2.7067 -6.2074 -5.3837 45 1 0.9540 -2.0485 -3.5011 46 1 1.6286 -3.6232 -3.0057 47 1 2.1941 -2.7812 -0.8163 48 1 0.5149 -2.2957 -1.1355 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13458982_15413834.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:28:50 Heat of formation + Delta-G solvation = -40.170444 kcal Electronic energy + Delta-G solvation = -30864.886986 eV Core-core repulsion = 26608.545229 eV Total energy + Delta-G solvation = -4256.341757 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 347.168 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -48.57913 -41.79251 -40.95572 -39.50069 -38.73746 -37.47926 -35.44497 -33.17495 -33.07248 -32.00849 -31.83589 -29.07572 -27.28498 -26.87306 -25.38815 -24.87998 -23.58329 -23.19817 -22.50611 -21.68232 -20.10522 -19.39780 -18.97479 -18.39647 -18.01584 -17.50219 -17.20616 -16.67262 -16.61979 -16.42822 -16.11922 -16.00945 -15.75663 -15.53724 -15.48498 -15.28467 -15.13395 -14.71901 -14.55061 -14.33431 -14.26184 -14.03821 -13.90036 -13.63340 -13.49912 -13.35714 -13.13609 -12.88117 -12.50476 -12.41569 -12.36178 -12.18616 -11.89862 -11.77757 -11.73476 -11.33909 -11.25383 -11.23210 -10.91793 -10.35735 -10.20731 -9.81165 -9.63473 -8.44701 -4.91143 0.42073 0.50556 1.31831 1.40077 1.50314 1.59386 1.85415 2.00172 2.62899 2.83362 3.14108 3.23357 3.42342 3.49637 3.56347 3.61993 3.66224 3.78026 3.87521 3.88986 4.06644 4.12611 4.13729 4.21385 4.30795 4.34065 4.45822 4.49576 4.59830 4.63193 4.64780 4.67610 4.69242 4.70969 4.72694 4.81364 4.87070 4.96114 5.06334 5.10974 5.15851 5.22239 5.26451 5.27837 5.33152 5.58592 5.59354 5.64921 5.66032 6.10890 6.23234 6.42646 6.61599 6.81618 7.07350 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.555 6.555 2 C -0.054 4.054 3 Si 0.741 3.259 4 C -0.283 4.283 5 C 0.141 3.859 6 N -0.736 5.736 7 C 0.139 3.861 8 C 0.515 3.485 9 O -0.573 6.573 10 N -0.706 5.706 11 C 0.148 3.852 12 C -0.040 4.040 13 C -0.071 4.071 14 C -0.120 4.120 15 C -0.125 4.125 16 C -0.133 4.133 17 C -0.131 4.131 18 C -0.122 4.122 19 C -0.140 4.140 20 C 0.055 3.945 21 H 0.124 0.876 22 F -0.224 7.224 23 C -0.146 4.146 24 C -0.120 4.120 25 C -0.053 4.053 26 H 0.381 0.619 27 H 0.114 0.886 28 H -0.292 1.292 29 H -0.312 1.312 30 H 0.143 0.857 31 H 0.407 0.593 32 H 0.113 0.887 33 H 0.415 0.585 34 H 0.077 0.923 35 H 0.068 0.932 36 H 0.142 0.858 37 H 0.137 0.863 38 H 0.130 0.870 39 H 0.128 0.872 40 H 0.123 0.877 41 H 0.094 0.906 42 H 0.095 0.905 43 H 0.105 0.895 44 H 0.101 0.899 45 H 0.054 0.946 46 H 0.101 0.899 47 H 0.080 0.920 48 H 0.068 0.932 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.435 -3.185 1.217 5.594 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.363 6.363 2 C -0.165 4.165 3 Si 0.649 3.351 4 C -0.293 4.293 5 C 0.020 3.980 6 N -0.368 5.368 7 C 0.030 3.970 8 C 0.301 3.699 9 O -0.452 6.452 10 N -0.358 5.358 11 C 0.024 3.976 12 C -0.040 4.040 13 C -0.071 4.071 14 C -0.138 4.138 15 C -0.143 4.143 16 C -0.151 4.151 17 C -0.149 4.149 18 C -0.140 4.140 19 C -0.178 4.178 20 C 0.019 3.981 21 H 0.141 0.859 22 F -0.205 7.205 23 C -0.184 4.184 24 C -0.159 4.159 25 C -0.091 4.091 26 H 0.230 0.770 27 H 0.132 0.868 28 H -0.220 1.220 29 H -0.241 1.241 30 H 0.159 0.841 31 H 0.243 0.757 32 H 0.130 0.870 33 H 0.252 0.748 34 H 0.095 0.905 35 H 0.087 0.913 36 H 0.160 0.840 37 H 0.155 0.845 38 H 0.148 0.852 39 H 0.146 0.854 40 H 0.141 0.859 41 H 0.113 0.887 42 H 0.113 0.887 43 H 0.123 0.877 44 H 0.120 0.880 45 H 0.073 0.927 46 H 0.119 0.881 47 H 0.098 0.902 48 H 0.086 0.914 Dipole moment (debyes) X Y Z Total from point charges 4.194 -2.275 1.116 4.900 hybrid contribution -0.827 -0.009 -0.712 1.091 sum 3.367 -2.285 0.404 4.089 Atomic orbital electron populations 1.86534 1.19678 1.80111 1.49958 1.24811 0.82640 1.09586 0.99415 0.94751 0.91055 0.73747 0.75530 1.20932 1.08379 0.98908 1.01096 1.20487 0.93607 0.97051 0.86828 1.44378 1.67888 1.05015 1.19563 1.21103 1.00291 0.83632 0.91980 1.20815 0.75732 0.82164 0.91216 1.90732 1.52087 1.51132 1.51222 1.45701 1.68815 1.11964 1.09333 1.21114 1.01059 0.92920 0.82504 1.20554 0.92279 0.93737 0.97480 1.19469 0.93506 0.98298 0.95840 1.21303 0.97924 0.98921 0.95653 1.21438 0.92820 0.99487 1.00537 1.21451 0.99972 0.97563 0.96096 1.21376 0.97512 0.99266 0.96701 1.21121 0.92697 0.99850 1.00367 1.23634 0.96375 1.01297 0.96527 1.23366 0.98074 0.79997 0.96664 0.85865 1.92787 1.94822 1.41354 1.91556 1.23771 0.98207 0.99853 0.96542 1.21835 0.94173 1.02603 0.97309 1.19947 1.01909 0.92527 0.94679 0.77022 0.86779 1.21967 1.24104 0.84072 0.75702 0.86978 0.74755 0.90517 0.91348 0.83981 0.84520 0.85181 0.85397 0.85853 0.88728 0.88652 0.87704 0.88049 0.92709 0.88095 0.90173 0.91364 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -2.21 12.55 -148.98 -1.87 -4.08 16 2 C -0.05 -0.01 2.83 71.24 0.20 0.20 16 3 Si 0.74 -0.24 29.68 68.60 2.04 1.80 16 4 C -0.28 0.28 5.44 -16.76 -0.09 0.19 16 5 C 0.14 -0.21 9.63 83.41 0.80 0.60 16 6 N -0.74 0.63 5.46 -329.00 -1.80 -1.16 16 7 C 0.14 -0.50 3.36 44.33 0.15 -0.35 16 8 C 0.51 -0.27 7.08 87.66 0.62 0.35 16 9 O -0.57 -4.68 16.10 -3.02 -0.05 -4.73 16 10 N -0.71 4.21 5.18 -463.05 -2.40 1.82 16 11 C 0.15 -0.73 4.85 86.38 0.42 -0.31 16 12 C -0.04 0.27 0.63 -52.40 -0.03 0.24 16 13 C -0.07 0.31 4.67 -19.87 -0.09 0.22 16 14 C -0.12 0.62 9.05 22.27 0.20 0.83 16 15 C -0.12 0.46 10.05 22.27 0.22 0.68 16 16 C -0.13 0.27 10.05 22.27 0.22 0.50 16 17 C -0.13 0.18 10.05 22.27 0.22 0.40 16 18 C -0.12 0.25 9.33 22.27 0.21 0.45 16 19 C -0.14 0.73 7.00 31.12 0.22 0.95 16 20 C 0.05 -0.24 5.31 31.12 0.17 -0.07 16 21 H 0.12 -0.87 7.61 -2.39 -0.02 -0.89 16 22 F -0.22 -0.70 17.41 44.97 0.78 0.08 16 23 C -0.15 1.15 5.97 31.12 0.19 1.33 16 24 C -0.12 0.47 5.47 30.79 0.17 0.64 16 25 C -0.05 0.13 5.83 29.70 0.17 0.31 16 26 H 0.38 -0.30 8.70 -74.05 -0.64 -0.94 16 27 H 0.11 -0.14 7.96 -2.39 -0.02 -0.16 16 28 H -0.29 -1.25 7.10 99.48 0.71 -0.54 16 29 H -0.31 -2.60 7.11 99.48 0.71 -1.89 16 30 H 0.14 -0.56 4.37 -2.91 -0.01 -0.58 16 31 H 0.41 0.10 8.12 -92.71 -0.75 -0.65 16 32 H 0.11 -0.84 8.14 -2.39 -0.02 -0.86 16 33 H 0.42 -4.39 8.08 -92.71 -0.75 -5.14 16 34 H 0.08 -0.36 7.31 -2.39 -0.02 -0.37 16 35 H 0.07 -0.12 7.95 -2.39 -0.02 -0.14 16 36 H 0.14 -1.33 6.44 -2.91 -0.02 -1.35 16 37 H 0.14 -0.94 8.06 -2.91 -0.02 -0.97 16 38 H 0.13 -0.59 8.06 -2.91 -0.02 -0.61 16 39 H 0.13 -0.44 8.06 -2.91 -0.02 -0.46 16 40 H 0.12 -0.41 8.06 -2.91 -0.02 -0.43 16 41 H 0.09 -0.62 8.10 -2.38 -0.02 -0.64 16 42 H 0.09 -0.30 8.10 -2.39 -0.02 -0.32 16 43 H 0.10 -0.76 6.83 -2.39 -0.02 -0.78 16 44 H 0.10 -1.10 7.75 -2.38 -0.02 -1.12 16 45 H 0.05 0.05 8.14 -2.39 -0.02 0.03 16 46 H 0.10 -0.87 8.14 -2.38 -0.02 -0.88 16 47 H 0.08 -0.39 8.14 -2.38 -0.02 -0.41 16 48 H 0.07 0.00 7.84 -2.39 -0.02 -0.02 16 Total: 0.00 -18.85 387.14 -0.43 -19.28 By element: Atomic # 1 Polarization: -19.04 SS G_CDS: -1.10 Total: -20.14 kcal Atomic # 6 Polarization: 3.17 SS G_CDS: 3.97 Total: 7.14 kcal Atomic # 7 Polarization: 4.85 SS G_CDS: -4.19 Total: 0.65 kcal Atomic # 8 Polarization: -6.89 SS G_CDS: -1.92 Total: -8.80 kcal Atomic # 9 Polarization: -0.70 SS G_CDS: 0.78 Total: 0.08 kcal Atomic # 14 Polarization: -0.24 SS G_CDS: 2.04 Total: 1.80 kcal Total: -18.85 -0.43 -19.28 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13458982_15413834.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -20.895 kcal (2) G-P(sol) polarization free energy of solvation -18.848 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -39.743 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.428 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.275 kcal (6) G-S(sol) free energy of system = (1) + (5) -40.170 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds