Wall clock time and date at job start Sat Mar 6 2021 21:28:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86301 * 109.47045 * 2 1 4 4 C 1.50705 * 109.47011 * 240.00134 * 2 1 3 5 5 C 1.31118 * 118.54675 * 109.99927 * 4 2 1 6 6 N 1.38916 * 121.84763 * 180.42538 * 5 4 2 7 7 C 1.47037 * 118.88531 * 346.66267 * 6 5 4 8 8 C 1.53536 * 107.65523 * 43.66225 * 7 6 5 9 9 C 1.50203 * 118.54386 * 289.73129 * 4 2 1 10 10 C 1.50698 * 109.33026 * 39.69253 * 9 4 2 11 11 O 1.21280 * 120.00260 * 119.99633 * 10 9 4 12 12 N 1.34775 * 119.99807 * 299.99954 * 10 9 4 13 13 C 1.46509 * 119.99646 * 180.02562 * 12 10 9 14 14 C 1.52995 * 109.46623 * 174.19599 * 13 12 10 15 15 C 1.50700 * 112.85121 * 71.85967 * 14 13 12 16 16 C 1.38244 * 119.99865 * 245.70853 * 15 14 13 17 17 C 1.38235 * 119.99737 * 179.80710 * 16 15 14 18 18 C 1.38238 * 120.00146 * 0.42191 * 17 16 15 19 19 C 1.38238 * 119.99713 * 359.81279 * 18 17 16 20 20 C 1.38231 * 120.00118 * 359.97438 * 19 18 17 21 21 C 1.53780 * 113.61739 * 300.65947 * 14 13 12 22 22 C 1.53784 * 87.08143 * 270.88355 * 21 14 13 23 23 H 1.09006 * 113.61138 * 89.20217 * 22 21 14 24 24 F 1.39900 * 113.61496 * 220.01326 * 22 21 14 25 25 C 1.53781 * 87.08287 * 334.56913 * 22 21 14 26 26 H 0.96701 * 114.00038 * 60.00074 * 1 2 3 27 27 H 1.09000 * 109.47288 * 120.00026 * 2 1 3 28 28 H 1.48505 * 110.00072 * 298.68305 * 3 2 1 29 29 H 1.48502 * 109.99856 * 59.99962 * 3 2 1 30 30 H 1.08005 * 119.07148 * 0.40354 * 5 4 2 31 31 H 0.96997 * 120.56101 * 166.64293 * 6 5 4 32 32 H 1.09005 * 109.81942 * 163.20405 * 7 6 5 33 33 H 1.09000 * 109.82037 * 284.06344 * 7 6 5 34 34 H 1.09001 * 109.62023 * 58.77489 * 8 7 6 35 35 H 1.09005 * 109.62293 * 179.13933 * 8 7 6 36 36 H 1.08993 * 109.33137 * 280.20739 * 9 4 2 37 37 H 0.96996 * 119.99960 * 359.97438 * 12 10 9 38 38 H 1.09000 * 109.46896 * 294.19594 * 13 12 10 39 39 H 1.09001 * 109.47191 * 54.20024 * 13 12 10 40 40 H 1.07993 * 119.99835 * 0.02562 * 16 15 14 41 41 H 1.08002 * 119.99688 * 180.20639 * 17 16 15 42 42 H 1.07997 * 119.99955 * 179.79189 * 18 17 16 43 43 H 1.07999 * 119.99715 * 179.97438 * 19 18 17 44 44 H 1.08008 * 119.99919 * 179.97438 * 20 19 18 45 45 H 1.08999 * 113.61437 * 25.43421 * 21 14 13 46 46 H 1.09000 * 113.61619 * 156.25327 * 21 14 13 47 47 H 1.09001 * 113.61034 * 270.88647 * 25 22 21 48 48 H 1.08993 * 113.61276 * 139.97900 * 25 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.5115 -0.0028 -2.1696 6 7 2.9918 -0.5856 -3.3355 7 6 3.1172 -2.0493 -3.3984 8 6 1.8457 -2.6524 -2.7845 9 6 1.7505 -2.1986 -1.3242 10 6 0.3977 -2.5723 -0.7754 11 8 -0.4110 -3.1321 -1.4849 12 7 0.0865 -2.2843 0.5039 13 6 -1.2286 -2.6481 1.0376 14 6 -1.2724 -2.3442 2.5364 15 6 -1.3237 -0.8676 2.8329 16 6 -0.2650 -0.2547 3.4769 17 6 -0.3104 1.1006 3.7454 18 6 -1.4181 1.8414 3.3776 19 6 -2.4788 1.2275 2.7380 20 6 -2.4315 -0.1269 2.4656 21 6 -0.2076 -3.0992 3.3495 22 6 -1.2360 -4.2332 3.4952 23 1 -1.1937 -4.9670 2.6902 24 9 -1.2469 -4.8201 4.7651 25 6 -2.3248 -3.1648 3.3008 26 1 -0.3933 0.4417 -0.7651 27 1 1.7923 -0.5138 0.8900 28 1 1.5878 2.4586 -1.2242 29 1 1.5614 2.4679 1.2085 30 1 2.6187 1.0632 -2.0328 31 1 3.2400 -0.0364 -4.0955 32 1 3.2135 -2.3677 -4.4365 33 1 3.9908 -2.3701 -2.8309 34 1 0.9725 -2.3055 -3.3370 35 1 1.8983 -3.7403 -2.8288 36 1 2.5243 -2.6936 -0.7376 37 1 0.7334 -1.8368 1.0715 38 1 -2.0000 -2.0714 0.5272 39 1 -1.4041 -3.7118 0.8773 40 1 0.5989 -0.8341 3.7672 41 1 0.5181 1.5800 4.2455 42 1 -1.4550 2.8995 3.5903 43 1 -3.3444 1.8062 2.4510 44 1 -3.2605 -0.6065 1.9662 45 1 0.6703 -3.3780 2.7667 46 1 0.0466 -2.6147 4.2923 47 1 -2.6504 -2.6990 4.2309 48 1 -3.1559 -3.4966 2.6786 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13458982_15608500.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:28:54 Heat of formation + Delta-G solvation = -22.826978 kcal Electronic energy + Delta-G solvation = -32997.846022 eV Core-core repulsion = 28742.256334 eV Total energy + Delta-G solvation = -4255.589688 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 347.168 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -48.47284 -41.76390 -40.91889 -39.15236 -38.57676 -37.67687 -34.88499 -33.46341 -32.74954 -31.96092 -31.78966 -28.73986 -27.31206 -26.99534 -25.80152 -24.60663 -23.27830 -23.13831 -22.47982 -21.45157 -19.97853 -19.34706 -18.96835 -18.33304 -17.85747 -17.45491 -17.38145 -16.83572 -16.50664 -16.26649 -15.99587 -15.97303 -15.57909 -15.49023 -15.41916 -15.18255 -14.94425 -14.62266 -14.43531 -14.29368 -14.21198 -13.90427 -13.75326 -13.53330 -13.45959 -13.18371 -13.08080 -12.73465 -12.45334 -12.36461 -12.15742 -12.14455 -11.89773 -11.75759 -11.61258 -11.47494 -11.28646 -11.27330 -10.53155 -10.34783 -9.74023 -9.63336 -9.52907 -8.55211 -4.95172 0.52468 0.58978 1.21225 1.33067 1.55983 1.96525 2.05497 2.37481 2.50342 2.91976 3.15043 3.24946 3.44479 3.46878 3.55847 3.64675 3.69944 3.77060 3.89904 4.00829 4.12488 4.14773 4.18907 4.24273 4.25685 4.29040 4.36851 4.51276 4.54537 4.55970 4.59047 4.63172 4.68677 4.70800 4.74150 4.76138 4.78924 4.88920 5.04861 5.15165 5.16616 5.19406 5.25423 5.29263 5.37522 5.64044 5.67560 5.70875 5.75221 6.16672 6.20888 6.53477 6.73191 6.79957 7.53923 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.514 6.514 2 C -0.050 4.050 3 Si 0.660 3.340 4 C -0.280 4.280 5 C 0.152 3.848 6 N -0.747 5.747 7 C 0.119 3.881 8 C -0.119 4.119 9 C -0.039 4.039 10 C 0.532 3.468 11 O -0.552 6.552 12 N -0.700 5.700 13 C 0.154 3.846 14 C -0.052 4.052 15 C -0.049 4.049 16 C -0.115 4.115 17 C -0.115 4.115 18 C -0.123 4.123 19 C -0.115 4.115 20 C -0.102 4.102 21 C -0.154 4.154 22 C 0.065 3.935 23 H 0.111 0.889 24 F -0.205 7.205 25 C -0.142 4.142 26 H 0.367 0.633 27 H 0.102 0.898 28 H -0.267 1.267 29 H -0.255 1.255 30 H 0.132 0.868 31 H 0.403 0.597 32 H 0.081 0.919 33 H 0.063 0.937 34 H 0.078 0.922 35 H 0.079 0.921 36 H 0.093 0.907 37 H 0.400 0.600 38 H 0.072 0.928 39 H 0.068 0.932 40 H 0.119 0.881 41 H 0.118 0.882 42 H 0.116 0.884 43 H 0.118 0.882 44 H 0.117 0.883 45 H 0.083 0.917 46 H 0.102 0.898 47 H 0.101 0.899 48 H 0.086 0.914 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.200 2.378 -1.293 5.862 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.319 6.319 2 C -0.161 4.161 3 Si 0.563 3.437 4 C -0.291 4.291 5 C 0.030 3.970 6 N -0.377 5.377 7 C -0.005 4.005 8 C -0.157 4.157 9 C -0.060 4.060 10 C 0.318 3.682 11 O -0.430 6.430 12 N -0.353 5.353 13 C 0.030 3.970 14 C -0.052 4.052 15 C -0.049 4.049 16 C -0.133 4.133 17 C -0.133 4.133 18 C -0.141 4.141 19 C -0.133 4.133 20 C -0.120 4.120 21 C -0.192 4.192 22 C 0.029 3.971 23 H 0.128 0.872 24 F -0.186 7.186 25 C -0.180 4.180 26 H 0.214 0.786 27 H 0.120 0.880 28 H -0.192 1.192 29 H -0.180 1.180 30 H 0.149 0.851 31 H 0.237 0.763 32 H 0.100 0.900 33 H 0.081 0.919 34 H 0.097 0.903 35 H 0.098 0.902 36 H 0.111 0.889 37 H 0.238 0.762 38 H 0.090 0.910 39 H 0.086 0.914 40 H 0.137 0.863 41 H 0.136 0.864 42 H 0.134 0.866 43 H 0.136 0.864 44 H 0.135 0.865 45 H 0.102 0.898 46 H 0.120 0.880 47 H 0.119 0.881 48 H 0.104 0.896 Dipole moment (debyes) X Y Z Total from point charges 4.511 2.338 -1.181 5.216 hybrid contribution -0.709 0.486 -0.453 0.972 sum 3.802 2.824 -1.635 5.010 Atomic orbital electron populations 1.86786 1.17260 1.78975 1.48888 1.24561 0.84609 1.09150 0.97796 0.95536 0.92280 0.75871 0.80037 1.20563 1.13105 0.94718 1.00685 1.20508 0.92885 0.96788 0.86801 1.44603 1.71825 1.06515 1.14747 1.21663 0.97376 0.80034 1.01474 1.21733 0.98625 1.01077 0.94296 1.19718 0.95017 0.93707 0.97568 1.20292 0.88925 0.77592 0.81396 1.90694 1.51178 1.42989 1.58116 1.45887 1.16567 1.60465 1.12397 1.20955 0.86425 1.00077 0.89585 1.20750 0.98006 0.91863 0.94605 1.19226 0.94495 0.93141 0.98052 1.20949 0.98181 0.94689 0.99453 1.21079 0.98135 0.94142 0.99955 1.21118 0.94126 0.99743 0.99088 1.21081 0.98515 0.94810 0.98892 1.20833 0.97715 0.93889 0.99567 1.23773 0.97662 0.96051 1.01684 1.23088 0.98245 0.93531 0.82192 0.87175 1.92822 1.97096 1.86311 1.42361 1.23652 0.97093 0.95505 1.01717 0.78586 0.87996 1.19244 1.17954 0.85067 0.76304 0.90008 0.91852 0.90286 0.90231 0.88887 0.76165 0.91014 0.91357 0.86298 0.86398 0.86588 0.86432 0.86518 0.89830 0.87976 0.88076 0.89557 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.51 0.23 9.52 -35.23 -0.34 -0.11 16 2 C -0.05 0.09 1.74 36.01 0.06 0.16 16 3 Si 0.66 -1.10 29.95 -169.99 -5.09 -6.20 16 4 C -0.28 0.38 5.14 -101.34 -0.52 -0.14 16 5 C 0.15 -0.27 9.62 -16.09 -0.15 -0.42 16 6 N -0.75 1.69 5.83 -60.68 -0.35 1.34 16 7 C 0.12 -0.27 7.15 -3.47 -0.02 -0.29 16 8 C -0.12 0.01 4.91 -26.34 -0.13 -0.12 16 9 C -0.04 0.01 2.75 -93.05 -0.26 -0.24 16 10 C 0.53 1.06 6.36 -10.99 -0.07 0.99 16 11 O -0.55 -3.38 15.79 5.56 0.09 -3.29 16 12 N -0.70 0.08 2.72 -60.29 -0.16 -0.09 16 13 C 0.15 0.03 4.88 -4.04 -0.02 0.01 16 14 C -0.05 0.05 0.64 -154.85 -0.10 -0.05 16 15 C -0.05 0.00 4.81 -104.62 -0.50 -0.50 16 16 C -0.11 0.00 9.05 -39.58 -0.36 -0.36 16 17 C -0.12 -0.08 10.05 -39.58 -0.40 -0.48 16 18 C -0.12 -0.14 10.05 -39.58 -0.40 -0.54 16 19 C -0.11 -0.12 10.05 -39.58 -0.40 -0.52 16 20 C -0.10 -0.08 9.24 -39.59 -0.37 -0.44 16 21 C -0.15 0.20 5.96 -25.92 -0.15 0.04 16 22 C 0.07 -0.01 5.32 -25.92 -0.14 -0.15 16 23 H 0.11 -0.13 7.66 -51.93 -0.40 -0.53 16 24 F -0.21 -0.59 17.41 2.25 0.04 -0.55 16 25 C -0.14 0.10 6.98 -25.92 -0.18 -0.08 16 26 H 0.37 -0.33 8.70 45.56 0.40 0.07 16 27 H 0.10 -0.28 6.37 -51.93 -0.33 -0.61 16 28 H -0.27 -0.19 6.84 56.52 0.39 0.20 16 29 H -0.25 -0.47 7.11 56.52 0.40 -0.07 16 30 H 0.13 -0.36 4.30 -52.48 -0.23 -0.59 16 31 H 0.40 -1.54 8.96 -40.82 -0.37 -1.90 16 32 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 33 H 0.06 -0.17 8.14 -51.93 -0.42 -0.59 16 34 H 0.08 0.19 7.77 -51.93 -0.40 -0.21 16 35 H 0.08 0.00 8.14 -51.93 -0.42 -0.42 16 36 H 0.09 -0.15 8.14 -51.93 -0.42 -0.57 16 37 H 0.40 -0.52 5.00 -40.82 -0.20 -0.72 16 38 H 0.07 0.12 7.82 -51.93 -0.41 -0.29 16 39 H 0.07 0.05 7.33 -51.93 -0.38 -0.33 16 40 H 0.12 -0.18 6.40 -52.49 -0.34 -0.52 16 41 H 0.12 -0.06 8.06 -52.49 -0.42 -0.49 16 42 H 0.12 0.01 8.06 -52.49 -0.42 -0.41 16 43 H 0.12 -0.01 8.06 -52.49 -0.42 -0.44 16 44 H 0.12 0.01 8.06 -52.48 -0.42 -0.41 16 45 H 0.08 -0.17 7.51 -51.93 -0.39 -0.56 16 46 H 0.10 -0.11 6.78 -51.93 -0.35 -0.46 16 47 H 0.10 0.00 8.10 -51.93 -0.42 -0.43 16 48 H 0.09 -0.12 8.10 -51.93 -0.42 -0.54 16 LS Contribution 375.46 15.07 5.66 5.66 Total: 0.00 -6.81 375.46 -11.10 -17.90 By element: Atomic # 1 Polarization: -4.69 SS G_CDS: -6.83 Total: -11.52 kcal Atomic # 6 Polarization: 0.96 SS G_CDS: -4.10 Total: -3.14 kcal Atomic # 7 Polarization: 1.77 SS G_CDS: -0.52 Total: 1.25 kcal Atomic # 8 Polarization: -3.15 SS G_CDS: -0.25 Total: -3.40 kcal Atomic # 9 Polarization: -0.59 SS G_CDS: 0.04 Total: -0.55 kcal Atomic # 14 Polarization: -1.10 SS G_CDS: -5.09 Total: -6.20 kcal Total LS contribution 5.66 Total: 5.66 kcal Total: -6.81 -11.10 -17.90 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13458982_15608500.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -4.922 kcal (2) G-P(sol) polarization free energy of solvation -6.807 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -11.730 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.097 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.905 kcal (6) G-S(sol) free energy of system = (1) + (5) -22.827 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds