Wall clock time and date at job start Sat Mar 6 2021 21:28:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86301 * 109.47045 * 2 1 4 4 C 1.50705 * 109.47011 * 240.00134 * 2 1 3 5 5 C 1.31118 * 118.54675 * 109.99927 * 4 2 1 6 6 N 1.38916 * 121.84763 * 180.42538 * 5 4 2 7 7 C 1.47037 * 118.88531 * 346.66267 * 6 5 4 8 8 C 1.53536 * 107.65523 * 43.66225 * 7 6 5 9 9 C 1.50203 * 118.54386 * 289.73129 * 4 2 1 10 10 C 1.50698 * 109.33026 * 39.69253 * 9 4 2 11 11 O 1.21280 * 120.00260 * 119.99633 * 10 9 4 12 12 N 1.34775 * 119.99807 * 299.99954 * 10 9 4 13 13 C 1.46509 * 119.99646 * 180.02562 * 12 10 9 14 14 C 1.52995 * 109.46623 * 174.19599 * 13 12 10 15 15 C 1.50700 * 112.85121 * 71.85967 * 14 13 12 16 16 C 1.38244 * 119.99865 * 245.70853 * 15 14 13 17 17 C 1.38235 * 119.99737 * 179.80710 * 16 15 14 18 18 C 1.38238 * 120.00146 * 0.42191 * 17 16 15 19 19 C 1.38238 * 119.99713 * 359.81279 * 18 17 16 20 20 C 1.38231 * 120.00118 * 359.97438 * 19 18 17 21 21 C 1.53780 * 113.61739 * 300.65947 * 14 13 12 22 22 C 1.53784 * 87.08143 * 270.88355 * 21 14 13 23 23 H 1.09006 * 113.61138 * 89.20217 * 22 21 14 24 24 F 1.39900 * 113.61496 * 220.01326 * 22 21 14 25 25 C 1.53781 * 87.08287 * 334.56913 * 22 21 14 26 26 H 0.96701 * 114.00038 * 60.00074 * 1 2 3 27 27 H 1.09000 * 109.47288 * 120.00026 * 2 1 3 28 28 H 1.48505 * 110.00072 * 298.68305 * 3 2 1 29 29 H 1.48502 * 109.99856 * 59.99962 * 3 2 1 30 30 H 1.08005 * 119.07148 * 0.40354 * 5 4 2 31 31 H 0.96997 * 120.56101 * 166.64293 * 6 5 4 32 32 H 1.09005 * 109.81942 * 163.20405 * 7 6 5 33 33 H 1.09000 * 109.82037 * 284.06344 * 7 6 5 34 34 H 1.09001 * 109.62023 * 58.77489 * 8 7 6 35 35 H 1.09005 * 109.62293 * 179.13933 * 8 7 6 36 36 H 1.08993 * 109.33137 * 280.20739 * 9 4 2 37 37 H 0.96996 * 119.99960 * 359.97438 * 12 10 9 38 38 H 1.09000 * 109.46896 * 294.19594 * 13 12 10 39 39 H 1.09001 * 109.47191 * 54.20024 * 13 12 10 40 40 H 1.07993 * 119.99835 * 0.02562 * 16 15 14 41 41 H 1.08002 * 119.99688 * 180.20639 * 17 16 15 42 42 H 1.07997 * 119.99955 * 179.79189 * 18 17 16 43 43 H 1.07999 * 119.99715 * 179.97438 * 19 18 17 44 44 H 1.08008 * 119.99919 * 179.97438 * 20 19 18 45 45 H 1.08999 * 113.61437 * 25.43421 * 21 14 13 46 46 H 1.09000 * 113.61619 * 156.25327 * 21 14 13 47 47 H 1.09001 * 113.61034 * 270.88647 * 25 22 21 48 48 H 1.08993 * 113.61276 * 139.97900 * 25 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.5115 -0.0028 -2.1696 6 7 2.9918 -0.5856 -3.3355 7 6 3.1172 -2.0493 -3.3984 8 6 1.8457 -2.6524 -2.7845 9 6 1.7505 -2.1986 -1.3242 10 6 0.3977 -2.5723 -0.7754 11 8 -0.4110 -3.1321 -1.4849 12 7 0.0865 -2.2843 0.5039 13 6 -1.2286 -2.6481 1.0376 14 6 -1.2724 -2.3442 2.5364 15 6 -1.3237 -0.8676 2.8329 16 6 -0.2650 -0.2547 3.4769 17 6 -0.3104 1.1006 3.7454 18 6 -1.4181 1.8414 3.3776 19 6 -2.4788 1.2275 2.7380 20 6 -2.4315 -0.1269 2.4656 21 6 -0.2076 -3.0992 3.3495 22 6 -1.2360 -4.2332 3.4952 23 1 -1.1937 -4.9670 2.6902 24 9 -1.2469 -4.8201 4.7651 25 6 -2.3248 -3.1648 3.3008 26 1 -0.3933 0.4417 -0.7651 27 1 1.7923 -0.5138 0.8900 28 1 1.5878 2.4586 -1.2242 29 1 1.5614 2.4679 1.2085 30 1 2.6187 1.0632 -2.0328 31 1 3.2400 -0.0364 -4.0955 32 1 3.2135 -2.3677 -4.4365 33 1 3.9908 -2.3701 -2.8309 34 1 0.9725 -2.3055 -3.3370 35 1 1.8983 -3.7403 -2.8288 36 1 2.5243 -2.6936 -0.7376 37 1 0.7334 -1.8368 1.0715 38 1 -2.0000 -2.0714 0.5272 39 1 -1.4041 -3.7118 0.8773 40 1 0.5989 -0.8341 3.7672 41 1 0.5181 1.5800 4.2455 42 1 -1.4550 2.8995 3.5903 43 1 -3.3444 1.8062 2.4510 44 1 -3.2605 -0.6065 1.9662 45 1 0.6703 -3.3780 2.7667 46 1 0.0466 -2.6147 4.2923 47 1 -2.6504 -2.6990 4.2309 48 1 -3.1559 -3.4966 2.6786 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13458982_15608500.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:28:53 Heat of formation + Delta-G solvation = -17.806581 kcal Electronic energy + Delta-G solvation = -32997.628321 eV Core-core repulsion = 28742.256334 eV Total energy + Delta-G solvation = -4255.371987 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 347.168 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -48.58503 -41.79726 -40.91363 -39.17174 -38.61595 -37.62011 -35.00714 -33.40022 -32.65694 -31.97756 -31.80779 -28.77442 -27.24853 -26.92010 -25.74595 -24.60005 -23.23048 -23.11757 -22.49291 -21.54902 -19.96258 -19.25988 -18.89381 -18.34661 -17.89389 -17.47653 -17.34660 -16.83500 -16.52371 -16.25823 -16.05258 -15.98709 -15.56097 -15.53224 -15.46591 -15.10484 -14.96582 -14.54799 -14.43732 -14.30941 -14.24063 -13.93514 -13.76576 -13.55507 -13.44181 -13.21423 -13.11817 -12.67758 -12.46552 -12.36370 -12.17347 -12.15805 -11.83497 -11.76349 -11.61926 -11.36777 -11.29089 -11.24042 -10.68311 -10.30405 -9.79098 -9.72569 -9.56337 -8.40775 -4.85510 0.48837 0.55551 1.31616 1.43737 1.61526 1.88846 2.07063 2.33619 2.69501 2.88614 3.17642 3.27983 3.47010 3.55930 3.58569 3.70053 3.72136 3.88227 3.90305 4.06365 4.13665 4.15035 4.21764 4.26772 4.29817 4.37314 4.42643 4.54184 4.63357 4.65710 4.67493 4.68338 4.72387 4.72964 4.76207 4.84101 4.86296 4.92870 5.02467 5.13776 5.18268 5.25417 5.28069 5.31105 5.48734 5.60580 5.61533 5.67155 5.71745 6.14950 6.35417 6.59961 6.74067 6.96863 7.43793 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.526 6.526 2 C -0.050 4.050 3 Si 0.735 3.265 4 C -0.286 4.286 5 C 0.154 3.846 6 N -0.747 5.747 7 C 0.122 3.878 8 C -0.117 4.117 9 C -0.036 4.036 10 C 0.529 3.471 11 O -0.598 6.598 12 N -0.686 5.686 13 C 0.158 3.842 14 C -0.040 4.040 15 C -0.049 4.049 16 C -0.117 4.117 17 C -0.125 4.125 18 C -0.138 4.138 19 C -0.127 4.127 20 C -0.112 4.112 21 C -0.146 4.146 22 C 0.058 3.942 23 H 0.121 0.879 24 F -0.223 7.223 25 C -0.141 4.141 26 H 0.368 0.632 27 H 0.117 0.883 28 H -0.299 1.299 29 H -0.302 1.302 30 H 0.141 0.859 31 H 0.411 0.589 32 H 0.093 0.907 33 H 0.076 0.924 34 H 0.049 0.951 35 H 0.075 0.925 36 H 0.112 0.888 37 H 0.408 0.592 38 H 0.056 0.944 39 H 0.064 0.936 40 H 0.138 0.862 41 H 0.129 0.871 42 H 0.121 0.879 43 H 0.123 0.877 44 H 0.118 0.882 45 H 0.096 0.904 46 H 0.105 0.895 47 H 0.095 0.905 48 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.853 2.261 -1.165 7.310 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.331 6.331 2 C -0.161 4.161 3 Si 0.643 3.357 4 C -0.297 4.297 5 C 0.031 3.969 6 N -0.377 5.377 7 C -0.002 4.002 8 C -0.156 4.156 9 C -0.057 4.057 10 C 0.317 3.683 11 O -0.480 6.480 12 N -0.338 5.338 13 C 0.033 3.967 14 C -0.040 4.040 15 C -0.049 4.049 16 C -0.134 4.134 17 C -0.143 4.143 18 C -0.156 4.156 19 C -0.145 4.145 20 C -0.130 4.130 21 C -0.184 4.184 22 C 0.022 3.978 23 H 0.138 0.862 24 F -0.204 7.204 25 C -0.179 4.179 26 H 0.215 0.785 27 H 0.135 0.865 28 H -0.227 1.227 29 H -0.230 1.230 30 H 0.158 0.842 31 H 0.247 0.753 32 H 0.112 0.888 33 H 0.094 0.906 34 H 0.068 0.932 35 H 0.094 0.906 36 H 0.130 0.870 37 H 0.248 0.752 38 H 0.074 0.926 39 H 0.082 0.918 40 H 0.155 0.845 41 H 0.147 0.853 42 H 0.139 0.861 43 H 0.141 0.859 44 H 0.136 0.864 45 H 0.114 0.886 46 H 0.123 0.877 47 H 0.114 0.886 48 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges 6.196 2.221 -1.043 6.665 hybrid contribution -1.285 0.572 -0.506 1.494 sum 4.912 2.794 -1.549 5.859 Atomic orbital electron populations 1.86774 1.18178 1.79067 1.49080 1.24665 0.83875 1.09203 0.98375 0.94787 0.91038 0.74114 0.75713 1.20466 1.13940 0.94144 1.01153 1.20654 0.92399 0.97176 0.86701 1.44681 1.71406 1.06716 1.14875 1.21687 0.96425 0.79842 1.02247 1.21677 0.98595 1.00959 0.94402 1.19742 0.93950 0.94543 0.97476 1.20739 0.89394 0.76750 0.81438 1.90673 1.52763 1.45255 1.59313 1.45799 1.16486 1.59605 1.11944 1.20862 0.86163 0.99515 0.90130 1.20568 0.98369 0.91345 0.93754 1.19300 0.94329 0.93430 0.97835 1.21166 0.98659 0.94624 0.98988 1.21307 0.98337 0.94608 1.00021 1.21307 0.94517 1.00267 0.99499 1.21235 0.98905 0.95149 0.99201 1.20959 0.98213 0.94001 0.99845 1.23753 0.97683 0.95171 1.01787 1.23310 0.98944 0.94028 0.81519 0.86179 1.92785 1.97223 1.86671 1.43699 1.23639 0.97356 0.95346 1.01553 0.78477 0.86523 1.22698 1.22981 0.84202 0.75340 0.88830 0.90598 0.93208 0.90620 0.87018 0.75218 0.92578 0.91751 0.84461 0.85309 0.86106 0.85896 0.86355 0.88591 0.87679 0.88623 0.88999 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.31 9.52 -148.98 -1.42 -1.11 16 2 C -0.05 0.22 1.74 71.24 0.12 0.34 16 3 Si 0.74 -2.52 29.95 68.60 2.05 -0.47 16 4 C -0.29 0.98 5.14 -16.76 -0.09 0.89 16 5 C 0.15 -0.67 9.62 83.41 0.80 0.13 16 6 N -0.75 4.13 5.83 -345.89 -2.02 2.12 16 7 C 0.12 -0.67 7.15 86.46 0.62 -0.06 16 8 C -0.12 -0.01 4.91 30.85 0.15 0.14 16 9 C -0.04 0.04 2.75 -12.37 -0.03 0.00 16 10 C 0.53 2.32 6.36 87.66 0.56 2.88 16 11 O -0.60 -8.20 15.79 -3.03 -0.05 -8.25 16 12 N -0.69 0.21 2.72 -463.05 -1.26 -1.05 16 13 C 0.16 0.13 4.88 86.38 0.42 0.55 16 14 C -0.04 0.08 0.64 -52.40 -0.03 0.05 16 15 C -0.05 0.00 4.81 -19.86 -0.10 -0.10 16 16 C -0.12 0.07 9.05 22.27 0.20 0.27 16 17 C -0.12 -0.17 10.05 22.27 0.22 0.05 16 18 C -0.14 -0.41 10.05 22.27 0.22 -0.19 16 19 C -0.13 -0.38 10.05 22.27 0.22 -0.16 16 20 C -0.11 -0.25 9.24 22.27 0.21 -0.04 16 21 C -0.15 0.51 5.96 31.12 0.19 0.69 16 22 C 0.06 -0.03 5.32 31.12 0.17 0.13 16 23 H 0.12 -0.33 7.66 -2.38 -0.02 -0.35 16 24 F -0.22 -1.29 17.41 44.97 0.78 -0.51 16 25 C -0.14 0.18 6.98 31.12 0.22 0.40 16 26 H 0.37 -0.36 8.70 -74.06 -0.64 -1.01 16 27 H 0.12 -0.84 6.37 -2.39 -0.02 -0.85 16 28 H -0.30 -0.55 6.84 99.48 0.68 0.13 16 29 H -0.30 -1.41 7.11 99.48 0.71 -0.71 16 30 H 0.14 -0.89 4.30 -2.91 -0.01 -0.90 16 31 H 0.41 -3.58 8.96 -92.71 -0.83 -4.41 16 32 H 0.09 -0.72 8.14 -2.38 -0.02 -0.74 16 33 H 0.08 -0.56 8.14 -2.39 -0.02 -0.58 16 34 H 0.05 0.31 7.77 -2.39 -0.02 0.29 16 35 H 0.08 0.04 8.14 -2.38 -0.02 0.03 16 36 H 0.11 -0.53 8.14 -2.39 -0.02 -0.55 16 37 H 0.41 -1.46 5.00 -92.71 -0.46 -1.92 16 38 H 0.06 0.25 7.82 -2.39 -0.02 0.23 16 39 H 0.06 0.13 7.33 -2.39 -0.02 0.11 16 40 H 0.14 -0.64 6.40 -2.91 -0.02 -0.66 16 41 H 0.13 -0.18 8.06 -2.91 -0.02 -0.20 16 42 H 0.12 0.13 8.06 -2.91 -0.02 0.11 16 43 H 0.12 0.11 8.06 -2.91 -0.02 0.09 16 44 H 0.12 0.15 8.06 -2.91 -0.02 0.12 16 45 H 0.10 -0.55 7.51 -2.39 -0.02 -0.57 16 46 H 0.10 -0.37 6.78 -2.39 -0.02 -0.38 16 47 H 0.10 0.02 8.10 -2.39 -0.02 0.00 16 48 H 0.09 -0.23 8.10 -2.39 -0.02 -0.24 16 Total: 0.00 -17.51 375.46 1.25 -16.26 By element: Atomic # 1 Polarization: -12.06 SS G_CDS: -0.92 Total: -12.97 kcal Atomic # 6 Polarization: 1.90 SS G_CDS: 4.07 Total: 5.98 kcal Atomic # 7 Polarization: 4.34 SS G_CDS: -3.28 Total: 1.07 kcal Atomic # 8 Polarization: -7.89 SS G_CDS: -1.47 Total: -9.36 kcal Atomic # 9 Polarization: -1.29 SS G_CDS: 0.78 Total: -0.51 kcal Atomic # 14 Polarization: -2.52 SS G_CDS: 2.05 Total: -0.47 kcal Total: -17.51 1.25 -16.26 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13458982_15608500.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -1.547 kcal (2) G-P(sol) polarization free energy of solvation -17.514 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -19.061 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.254 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.260 kcal (6) G-S(sol) free energy of system = (1) + (5) -17.807 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds