Wall clock time and date at job start Sat Mar 6 2021 21:28:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42892 * 1 3 3 Si 1.86303 * 109.47724 * 2 1 4 4 C 1.50708 * 109.46824 * 119.99917 * 2 1 3 5 5 C 1.34496 * 125.48974 * 210.01965 * 4 2 1 6 6 C 1.46757 * 106.36313 * 179.97438 * 5 4 2 7 7 C 1.47260 * 126.97231 * 179.97438 * 6 5 4 8 8 O 1.21623 * 120.00307 * 180.02562 * 7 6 5 9 9 N 1.34780 * 119.99642 * 0.03029 * 7 6 5 10 10 C 1.46502 * 119.99621 * 179.72597 * 9 7 6 11 11 C 1.53004 * 109.47010 * 175.37942 * 10 9 7 12 12 C 1.50705 * 112.84676 * 294.00179 * 11 10 9 13 13 C 1.38239 * 119.99788 * 113.51094 * 12 11 10 14 14 C 1.38237 * 119.99927 * 179.79083 * 13 12 11 15 15 C 1.38237 * 119.99854 * 0.44204 * 14 13 12 16 16 C 1.38234 * 120.00026 * 359.81093 * 15 14 13 17 17 C 1.38230 * 120.00164 * 293.78808 * 12 11 10 18 18 C 1.53777 * 113.61791 * 162.70010 * 11 10 9 19 19 C 1.53782 * 87.07855 * 270.88167 * 18 11 10 20 20 H 1.08999 * 113.61711 * 89.12010 * 19 18 11 21 21 F 1.39898 * 113.68698 * 220.00442 * 19 18 11 22 22 C 1.53778 * 113.61747 * 65.19536 * 11 10 9 23 23 C 1.36332 * 106.05911 * 0.24841 * 6 5 4 24 24 C 1.50999 * 126.79152 * 180.45400 * 23 6 5 25 25 C 1.53391 * 108.31379 * 163.85342 * 24 23 6 26 26 C 1.53155 * 109.03842 * 48.25862 * 25 24 23 27 27 C 1.53136 * 109.53214 * 290.42673 * 26 25 24 28 28 N 1.35220 * 108.66491 * 359.60400 * 23 6 5 29 29 H 0.96699 * 113.99946 * 300.00753 * 1 2 3 30 30 H 1.08999 * 109.47346 * 239.99480 * 2 1 3 31 31 H 1.48497 * 110.00503 * 178.68181 * 3 2 1 32 32 H 1.48506 * 109.99365 * 299.99803 * 3 2 1 33 33 H 1.08001 * 126.82157 * 359.94380 * 5 4 2 34 34 H 0.97005 * 120.00219 * 359.97438 * 9 7 6 35 35 H 1.09005 * 109.47001 * 295.37206 * 10 9 7 36 36 H 1.08990 * 109.47578 * 55.37503 * 10 9 7 37 37 H 1.07998 * 120.00318 * 0.02562 * 13 12 11 38 38 H 1.07995 * 119.99893 * 180.27973 * 14 13 12 39 39 H 1.08003 * 119.99880 * 179.83782 * 15 14 13 40 40 H 1.07999 * 120.00272 * 179.97438 * 16 15 14 41 41 H 1.08000 * 120.00087 * 359.97438 * 17 12 11 42 42 H 1.09005 * 113.61179 * 25.42712 * 18 11 10 43 43 H 1.08996 * 113.61864 * 156.33375 * 18 11 10 44 44 H 1.08997 * 113.61592 * 203.66606 * 22 11 10 45 45 H 1.08996 * 113.61692 * 334.57239 * 22 11 10 46 46 H 1.09003 * 109.86196 * 44.04010 * 24 23 6 47 47 H 1.08997 * 109.52591 * 283.47528 * 24 23 6 48 48 H 1.09000 * 109.54588 * 288.39125 * 25 24 23 49 49 H 1.09003 * 109.61759 * 168.16946 * 25 24 23 50 50 H 1.09000 * 109.46514 * 170.41073 * 26 25 24 51 51 H 1.08997 * 109.46727 * 50.44876 * 26 25 24 52 52 H 1.09003 * 109.56159 * 291.14248 * 27 26 25 53 53 H 1.08999 * 109.56448 * 170.81101 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9312 -0.7104 1.2306 5 6 3.0854 -0.4460 1.8684 6 6 3.1547 -1.3770 3.0008 7 6 4.2327 -1.4790 3.9988 8 8 4.1599 -2.3027 4.8906 9 7 5.3000 -0.6593 3.9240 10 6 6.3696 -0.7567 4.9203 11 6 7.5056 0.1966 4.5439 12 6 8.1991 -0.1959 3.2647 13 6 8.1030 0.6153 2.1495 14 6 8.7427 0.2576 0.9774 15 6 9.4708 -0.9160 0.9178 16 6 9.5626 -1.7297 2.0315 17 6 8.9265 -1.3698 3.2049 18 6 8.4706 0.4935 5.7038 19 6 7.5415 1.6617 6.0738 20 1 6.7421 1.3832 6.7604 21 9 8.2225 2.8167 6.4729 22 6 7.1079 1.6810 4.5985 23 6 2.0216 -2.1324 2.9378 24 6 1.6141 -3.2325 3.8886 25 6 0.1211 -3.5184 3.6833 26 6 -0.1572 -3.6698 2.1848 27 6 -0.0052 -2.3106 1.4960 28 7 1.2882 -1.7250 1.8773 29 1 -0.3933 0.4418 0.7650 30 1 1.7923 -0.5139 -0.8899 31 1 3.5347 1.7702 0.0321 32 1 1.5616 2.4678 -1.2086 33 1 3.8164 0.3024 1.6002 34 1 5.3582 -0.0024 3.2125 35 1 5.9783 -0.4861 5.9011 36 1 6.7473 -1.7786 4.9492 37 1 7.5314 1.5305 2.1950 38 1 8.6714 0.8936 0.1075 39 1 9.9684 -1.1968 0.0013 40 1 10.1311 -2.6468 1.9849 41 1 8.9982 -2.0056 4.0749 42 1 8.5033 -0.2939 6.4569 43 1 9.4613 0.8099 5.3775 44 1 7.7260 2.3221 3.9701 45 1 6.0405 1.8525 4.4594 46 1 1.7898 -2.9170 4.9170 47 1 2.1931 -4.1310 3.6757 48 1 -0.4668 -2.6914 4.0815 49 1 -0.1494 -4.4397 4.1993 50 1 -1.1724 -4.0391 2.0394 51 1 0.5514 -4.3768 1.7534 52 1 -0.8124 -1.6494 1.8112 53 1 -0.0413 -2.4434 0.4147 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13458982_16915396.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:28:56 Heat of formation + Delta-G solvation = -19.374738 kcal Electronic energy + Delta-G solvation = -36757.508241 eV Core-core repulsion = 32090.078354 eV Total energy + Delta-G solvation = -4667.429888 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 385.184 amu Computer time = 1.12 seconds Orbital eigenvalues (eV) -48.55802 -42.79397 -41.54326 -39.97901 -38.73322 -37.93335 -36.84055 -35.18733 -33.49233 -32.05369 -31.86577 -31.18059 -29.92635 -28.23470 -27.09481 -26.48157 -25.09908 -24.62564 -23.58595 -23.18682 -22.50611 -21.71957 -21.07374 -20.13456 -19.45980 -18.83324 -18.32281 -17.47166 -17.28117 -17.00149 -16.74989 -16.61752 -16.46597 -16.09828 -15.96916 -15.75757 -15.52978 -15.49852 -15.33251 -15.11270 -15.08100 -14.84005 -14.76624 -14.49792 -14.36021 -14.28761 -14.22324 -13.89374 -13.64316 -13.49240 -13.34626 -13.23637 -12.67683 -12.48028 -12.40439 -12.31558 -12.19741 -12.11051 -11.98814 -11.81994 -11.78501 -11.74424 -11.32384 -11.23451 -10.92365 -10.69390 -10.12337 -9.84407 -9.65589 -9.57301 -9.05330 -4.93177 0.39802 0.47240 0.72310 1.06548 1.38710 1.66794 1.80989 2.02676 2.33602 2.54374 2.81125 3.16333 3.28214 3.34954 3.45846 3.47932 3.56209 3.60666 3.64776 3.70391 3.80876 3.83254 3.89481 4.09598 4.10482 4.14774 4.23190 4.27919 4.33138 4.35800 4.41694 4.44312 4.50451 4.61343 4.61731 4.65070 4.66609 4.71479 4.73228 4.75928 4.80357 4.82929 4.89066 4.96933 4.98199 5.03067 5.08762 5.12432 5.16971 5.23273 5.29247 5.45347 5.55781 5.61601 5.63176 5.70658 6.03187 6.07968 6.21991 6.61000 6.63030 7.32679 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.551 6.551 2 C -0.046 4.046 3 Si 0.794 3.206 4 C -0.008 4.008 5 C -0.172 4.172 6 C -0.255 4.255 7 C 0.590 3.410 8 O -0.586 6.586 9 N -0.712 5.712 10 C 0.151 3.849 11 C -0.043 4.043 12 C -0.068 4.068 13 C -0.123 4.123 14 C -0.127 4.127 15 C -0.134 4.134 16 C -0.130 4.130 17 C -0.123 4.123 18 C -0.138 4.138 19 C 0.059 3.941 20 H 0.125 0.875 21 F -0.223 7.223 22 C -0.148 4.148 23 C 0.108 3.892 24 C -0.054 4.054 25 C -0.122 4.122 26 C -0.136 4.136 27 C 0.105 3.895 28 N -0.424 5.424 29 H 0.394 0.606 30 H 0.110 0.890 31 H -0.272 1.272 32 H -0.294 1.294 33 H 0.160 0.840 34 H 0.408 0.592 35 H 0.078 0.922 36 H 0.064 0.936 37 H 0.140 0.860 38 H 0.135 0.865 39 H 0.131 0.869 40 H 0.130 0.870 41 H 0.125 0.875 42 H 0.096 0.904 43 H 0.096 0.904 44 H 0.104 0.896 45 H 0.098 0.902 46 H 0.084 0.916 47 H 0.075 0.925 48 H 0.075 0.925 49 H 0.087 0.913 50 H 0.109 0.891 51 H 0.062 0.938 52 H 0.105 0.895 53 H 0.094 0.906 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.981 1.762 -1.652 4.656 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.359 6.359 2 C -0.156 4.156 3 Si 0.697 3.303 4 C -0.117 4.117 5 C -0.196 4.196 6 C -0.265 4.265 7 C 0.381 3.619 8 O -0.468 6.468 9 N -0.363 5.363 10 C 0.027 3.973 11 C -0.044 4.044 12 C -0.069 4.069 13 C -0.141 4.141 14 C -0.145 4.145 15 C -0.152 4.152 16 C -0.148 4.148 17 C -0.141 4.141 18 C -0.176 4.176 19 C 0.023 3.977 20 H 0.143 0.857 21 F -0.204 7.204 22 C -0.186 4.186 23 C -0.011 4.011 24 C -0.092 4.092 25 C -0.160 4.160 26 C -0.174 4.174 27 C -0.015 4.015 28 N -0.100 5.100 29 H 0.244 0.756 30 H 0.127 0.873 31 H -0.198 1.198 32 H -0.221 1.221 33 H 0.177 0.823 34 H 0.244 0.756 35 H 0.096 0.904 36 H 0.082 0.918 37 H 0.158 0.842 38 H 0.153 0.847 39 H 0.149 0.851 40 H 0.148 0.852 41 H 0.143 0.857 42 H 0.115 0.885 43 H 0.114 0.886 44 H 0.122 0.878 45 H 0.116 0.884 46 H 0.103 0.897 47 H 0.093 0.907 48 H 0.093 0.907 49 H 0.106 0.894 50 H 0.127 0.873 51 H 0.081 0.919 52 H 0.123 0.877 53 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -3.778 1.378 -2.116 4.544 hybrid contribution 0.632 -0.566 -0.607 1.043 sum -3.146 0.811 -2.723 4.239 Atomic orbital electron populations 1.86460 1.16943 1.81801 1.50671 1.24983 0.85257 1.10876 0.94494 0.93199 0.78562 0.73973 0.84593 1.20926 0.95862 0.95469 0.99467 1.21889 0.98479 1.02910 0.96351 1.19931 0.98371 1.05885 1.02300 1.17508 0.81381 0.79704 0.83353 1.90741 1.79992 1.38463 1.37620 1.45535 1.20282 1.38663 1.31831 1.21067 0.85583 0.98807 0.91807 1.20596 0.95177 0.95102 0.93484 1.19497 0.97967 0.95054 0.94332 1.21297 1.00174 1.00243 0.92375 1.21417 0.97345 0.97083 0.98613 1.21434 0.99525 0.95209 0.99032 1.21379 0.99819 1.00269 0.93322 1.21144 0.97749 0.96714 0.98456 1.23621 0.98538 0.98274 0.97157 1.23328 0.95534 0.81823 0.97036 0.85695 1.92786 1.82043 1.52958 1.92598 1.23772 1.04138 0.94920 0.95731 1.20534 0.91575 0.97929 0.91044 1.20442 0.97025 0.94442 0.97250 1.21688 0.94303 1.03652 0.96331 1.21944 1.04508 0.95543 0.95402 1.22304 0.82185 0.95526 1.01435 1.44036 1.17961 1.26798 1.21218 0.75586 0.87260 1.19786 1.22121 0.82275 0.75572 0.90433 0.91751 0.84249 0.84702 0.85124 0.85237 0.85675 0.88541 0.88584 0.87753 0.88353 0.89730 0.90691 0.90678 0.89411 0.87292 0.91904 0.87727 0.88745 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 2.46 10.68 -148.98 -1.59 0.87 16 2 C -0.05 0.15 2.99 71.24 0.21 0.36 16 3 Si 0.79 -4.00 31.29 68.60 2.15 -1.85 16 4 C -0.01 0.00 6.15 40.99 0.25 0.25 16 5 C -0.17 -0.22 9.09 23.64 0.21 0.00 16 6 C -0.26 -1.52 6.28 -19.12 -0.12 -1.64 16 7 C 0.59 4.78 7.81 86.61 0.68 5.46 16 8 O -0.59 -8.54 15.33 -4.10 -0.06 -8.60 16 9 N -0.71 -1.28 5.17 -466.52 -2.41 -3.69 16 10 C 0.15 0.04 4.85 86.38 0.42 0.45 16 11 C -0.04 0.12 0.63 -52.40 -0.03 0.08 16 12 C -0.07 0.00 4.67 -19.86 -0.09 -0.09 16 13 C -0.12 0.09 9.05 22.27 0.20 0.29 16 14 C -0.13 -0.05 10.05 22.27 0.22 0.18 16 15 C -0.13 -0.20 10.05 22.27 0.22 0.02 16 16 C -0.13 -0.27 10.05 22.27 0.22 -0.05 16 17 C -0.12 -0.22 9.33 22.27 0.21 -0.01 16 18 C -0.14 0.36 7.00 31.12 0.22 0.58 16 19 C 0.06 -0.11 5.31 31.12 0.17 0.05 16 20 H 0.13 -0.59 7.61 -2.39 -0.02 -0.61 16 21 F -0.22 -1.07 17.41 44.97 0.78 -0.28 16 22 C -0.15 0.61 5.97 31.12 0.19 0.80 16 23 C 0.11 0.52 6.57 41.69 0.27 0.79 16 24 C -0.05 -0.19 5.32 30.07 0.16 -0.03 16 25 C -0.12 0.34 5.98 30.78 0.18 0.52 16 26 C -0.14 0.63 5.92 30.69 0.18 0.82 16 27 C 0.11 -0.43 5.32 86.33 0.46 0.03 16 28 N -0.42 -0.32 3.11 -493.61 -1.54 -1.85 16 29 H 0.39 -4.49 8.63 -74.06 -0.64 -5.13 16 30 H 0.11 -0.20 7.96 -2.39 -0.02 -0.22 16 31 H -0.27 0.47 6.77 99.48 0.67 1.14 16 32 H -0.29 -0.58 7.11 99.48 0.71 0.13 16 33 H 0.16 -0.41 6.30 -2.91 -0.02 -0.42 16 34 H 0.41 -0.70 7.20 -92.70 -0.67 -1.36 16 35 H 0.08 -0.03 7.31 -2.38 -0.02 -0.04 16 36 H 0.06 0.22 7.95 -2.39 -0.02 0.20 16 37 H 0.14 -0.65 6.44 -2.91 -0.02 -0.67 16 38 H 0.14 -0.40 8.06 -2.91 -0.02 -0.43 16 39 H 0.13 -0.18 8.06 -2.91 -0.02 -0.20 16 40 H 0.13 -0.06 8.06 -2.91 -0.02 -0.08 16 41 H 0.13 0.02 8.06 -2.91 -0.02 0.00 16 42 H 0.10 -0.42 8.10 -2.38 -0.02 -0.44 16 43 H 0.10 -0.09 8.10 -2.39 -0.02 -0.11 16 44 H 0.10 -0.41 6.83 -2.39 -0.02 -0.43 16 45 H 0.10 -0.62 7.75 -2.39 -0.02 -0.64 16 46 H 0.08 0.55 7.40 -2.39 -0.02 0.53 16 47 H 0.07 0.40 8.14 -2.39 -0.02 0.38 16 48 H 0.07 -0.27 8.12 -2.39 -0.02 -0.29 16 49 H 0.09 -0.38 8.14 -2.39 -0.02 -0.40 16 50 H 0.11 -0.92 8.14 -2.39 -0.02 -0.94 16 51 H 0.06 -0.13 8.11 -2.39 -0.02 -0.15 16 52 H 0.10 -0.80 7.94 -2.39 -0.02 -0.82 16 53 H 0.09 -0.32 7.70 -2.39 -0.02 -0.34 16 Total: 0.00 -19.30 421.37 1.41 -17.89 By element: Atomic # 1 Polarization: -10.99 SS G_CDS: -0.36 Total: -11.35 kcal Atomic # 6 Polarization: 4.44 SS G_CDS: 4.44 Total: 8.87 kcal Atomic # 7 Polarization: -1.60 SS G_CDS: -3.95 Total: -5.55 kcal Atomic # 8 Polarization: -6.08 SS G_CDS: -1.65 Total: -7.73 kcal Atomic # 9 Polarization: -1.07 SS G_CDS: 0.78 Total: -0.28 kcal Atomic # 14 Polarization: -4.00 SS G_CDS: 2.15 Total: -1.85 kcal Total: -19.30 1.41 -17.89 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13458982_16915396.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -1.483 kcal (2) G-P(sol) polarization free energy of solvation -19.297 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -20.781 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.406 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.892 kcal (6) G-S(sol) free energy of system = (1) + (5) -19.375 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.12 seconds