Wall clock time and date at job start Sat Mar 6 2021 21:29:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86301 * 109.47401 * 2 1 4 4 C 1.50695 * 109.46736 * 119.99944 * 2 1 3 5 5 C 1.38273 * 119.94627 * 65.00033 * 4 2 1 6 6 C 1.38147 * 120.05621 * 179.97438 * 5 4 2 7 7 C 1.38730 * 119.94655 * 0.02562 * 6 5 4 8 8 O 1.35898 * 120.06093 * 180.02562 * 7 6 5 9 9 C 1.42897 * 117.00430 * 179.97438 * 8 7 6 10 10 C 1.50702 * 109.47144 * 179.97438 * 9 8 7 11 11 O 1.21281 * 119.99693 * 0.02562 * 10 9 8 12 12 N 1.34773 * 119.99671 * 180.02562 * 10 9 8 13 13 C 1.46501 * 119.99728 * 180.02562 * 12 10 9 14 14 C 1.52997 * 109.47227 * 180.75093 * 13 12 10 15 15 C 1.50703 * 112.90529 * 293.94103 * 14 13 12 16 16 C 1.38235 * 120.00233 * 124.50649 * 15 14 13 17 17 C 1.38229 * 119.99902 * 179.76555 * 16 15 14 18 18 C 1.38231 * 120.00427 * 0.50479 * 17 16 15 19 19 C 1.38234 * 119.99627 * 359.74710 * 18 17 16 20 20 C 1.38236 * 120.00385 * 359.97438 * 19 18 17 21 21 C 1.54055 * 113.61663 * 162.68497 * 14 13 12 22 22 C 1.53785 * 86.98198 * 270.88446 * 21 14 13 23 23 H 1.09001 * 113.61344 * 89.15958 * 22 21 14 24 24 F 1.39901 * 113.60908 * 219.97961 * 22 21 14 25 25 C 1.53774 * 113.61723 * 65.18969 * 14 13 12 26 26 C 1.38733 * 119.88449 * 0.27303 * 7 6 5 27 27 C 1.38142 * 119.94675 * 359.47293 * 26 7 6 28 28 H 0.96700 * 114.00134 * 300.00672 * 1 2 3 29 29 H 1.09001 * 109.46886 * 239.99913 * 2 1 3 30 30 H 1.48500 * 109.99726 * 178.68177 * 3 2 1 31 31 H 1.48502 * 109.99614 * 299.99696 * 3 2 1 32 32 H 1.07996 * 119.96856 * 359.97184 * 5 4 2 33 33 H 1.07996 * 120.02522 * 179.97438 * 6 5 4 34 34 H 1.08999 * 109.46965 * 59.99949 * 9 8 7 35 35 H 1.08997 * 109.47036 * 300.00462 * 9 8 7 36 36 H 0.96999 * 120.00457 * 359.97438 * 12 10 9 37 37 H 1.09002 * 109.47612 * 60.74799 * 13 12 10 38 38 H 1.09000 * 109.46897 * 300.74909 * 13 12 10 39 39 H 1.08000 * 119.99502 * 0.02562 * 16 15 14 40 40 H 1.08007 * 120.00032 * 180.22600 * 17 16 15 41 41 H 1.07998 * 120.00600 * 179.72919 * 18 17 16 42 42 H 1.07999 * 119.99897 * 179.97438 * 19 18 17 43 43 H 1.07992 * 120.00200 * 179.97438 * 20 19 18 44 44 H 1.08992 * 113.61707 * 156.37850 * 21 14 13 45 45 H 1.09003 * 113.68915 * 25.39478 * 21 14 13 46 46 H 1.09004 * 113.61479 * 334.57359 * 25 14 13 47 47 H 1.08996 * 113.62137 * 203.66575 * 25 14 13 48 48 H 1.08008 * 120.02938 * 179.72728 * 26 7 6 49 49 H 1.08006 * 119.97331 * 180.23474 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.6839 -2.0605 1.3973 6 6 2.1437 -2.7142 2.5241 7 6 2.8537 -2.0147 3.4891 8 8 3.3076 -2.6555 4.5983 9 6 4.0315 -1.8724 5.5494 10 6 4.4512 -2.7457 6.7037 11 8 4.1595 -3.9229 6.7108 12 7 5.1507 -2.2184 7.7280 13 6 5.5592 -3.0675 8.8498 14 6 6.3174 -2.2250 9.8774 15 6 7.6315 -1.7047 9.3545 16 6 7.8963 -0.3481 9.3775 17 6 9.1036 0.1286 8.9023 18 6 10.0421 -0.7502 8.3944 19 6 9.7752 -2.1062 8.3665 20 6 8.5702 -2.5836 8.8471 21 6 6.4243 -2.8902 11.2628 22 6 5.0906 -2.2051 11.6046 23 1 4.2150 -2.8000 11.3447 24 9 5.0376 -1.7012 12.9087 25 6 5.4514 -1.1464 10.5493 26 6 3.0952 -0.6588 3.3224 27 6 2.6379 -0.0109 2.1913 28 1 -0.3933 0.4418 0.7650 29 1 1.7923 -0.5139 -0.8900 30 1 3.5347 1.7701 0.0321 31 1 1.5616 2.4678 -1.2086 32 1 1.1307 -2.6045 0.6460 33 1 1.9499 -3.7686 2.6541 34 1 3.3954 -1.0669 5.9163 35 1 4.9158 -1.4488 5.0734 36 1 5.3843 -1.2770 7.7221 37 1 6.2065 -3.8650 8.4851 38 1 4.6755 -3.5020 9.3172 39 1 7.1615 0.3388 9.7706 40 1 9.3120 1.1881 8.9236 41 1 10.9836 -0.3773 8.0190 42 1 10.5082 -2.7928 7.9694 43 1 8.3616 -3.6430 8.8249 44 1 7.2647 -2.5304 11.8563 45 1 6.3612 -3.9780 11.2324 46 1 4.6034 -0.8273 9.9434 47 1 6.0263 -0.3106 10.9481 48 1 3.6439 -0.1110 4.0743 49 1 2.8289 1.0439 2.0592 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13458982_2989410.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:29:04 Heat of formation + Delta-G solvation = -65.722268 kcal Electronic energy + Delta-G solvation = -32720.792170 eV Core-core repulsion = 28109.171459 eV Total energy + Delta-G solvation = -4611.620711 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 372.157 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -48.59805 -41.88938 -41.40481 -40.34172 -39.11194 -38.77178 -37.13827 -35.45374 -32.49936 -32.22538 -32.01032 -31.79380 -30.40463 -28.07062 -27.24646 -26.21405 -25.16367 -23.99269 -23.40326 -22.65294 -22.40392 -21.68078 -20.14996 -19.55117 -18.74010 -18.35845 -18.10544 -17.59673 -17.52995 -17.11046 -16.82081 -16.69568 -16.44108 -16.13489 -15.94134 -15.80787 -15.71319 -15.60889 -15.53871 -15.03389 -14.74124 -14.64896 -14.55178 -14.45660 -14.27474 -13.81357 -13.77774 -13.73601 -13.59946 -13.56436 -13.34540 -12.66114 -12.64527 -12.34575 -12.24606 -12.14231 -12.07113 -11.90621 -11.78209 -11.50376 -11.46200 -10.99172 -10.43191 -10.30001 -10.07759 -9.97818 -9.79669 -9.25179 -5.07566 0.24947 0.25976 0.26752 0.34262 1.27591 1.34217 1.41918 1.60098 1.95232 2.43528 2.62980 2.67034 2.94867 3.05980 3.21816 3.31673 3.42500 3.46216 3.48761 3.65181 3.69243 3.70369 3.82407 3.83663 3.84692 3.90460 3.94798 4.01681 4.09730 4.23187 4.31896 4.40017 4.42461 4.43713 4.46250 4.48179 4.50763 4.54606 4.61673 4.63695 4.77516 4.91935 4.92181 4.97087 5.09057 5.10997 5.14261 5.21630 5.42263 5.47750 5.48097 5.49842 5.64548 5.92357 6.15283 6.30110 6.57199 6.99823 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.063 4.063 3 Si 0.684 3.316 4 C -0.157 4.157 5 C -0.051 4.051 6 C -0.145 4.145 7 C 0.134 3.866 8 O -0.288 6.288 9 C 0.040 3.960 10 C 0.517 3.483 11 O -0.511 6.511 12 N -0.723 5.723 13 C 0.147 3.853 14 C -0.055 4.055 15 C -0.071 4.071 16 C -0.119 4.119 17 C -0.116 4.116 18 C -0.119 4.119 19 C -0.115 4.115 20 C -0.109 4.109 21 C -0.139 4.139 22 C 0.065 3.935 23 H 0.112 0.888 24 F -0.204 7.204 25 C -0.155 4.155 26 C -0.206 4.206 27 C -0.074 4.074 28 H 0.379 0.621 29 H 0.113 0.887 30 H -0.258 1.258 31 H -0.255 1.255 32 H 0.134 0.866 33 H 0.136 0.864 34 H 0.096 0.904 35 H 0.095 0.905 36 H 0.403 0.597 37 H 0.080 0.920 38 H 0.079 0.921 39 H 0.126 0.874 40 H 0.123 0.877 41 H 0.122 0.878 42 H 0.123 0.877 43 H 0.122 0.878 44 H 0.103 0.897 45 H 0.089 0.911 46 H 0.086 0.914 47 H 0.105 0.895 48 H 0.132 0.868 49 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.006 4.992 2.204 5.814 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.346 6.346 2 C -0.174 4.174 3 Si 0.586 3.414 4 C -0.158 4.158 5 C -0.069 4.069 6 C -0.164 4.164 7 C 0.089 3.911 8 O -0.200 6.200 9 C -0.038 4.038 10 C 0.301 3.699 11 O -0.385 6.385 12 N -0.377 5.377 13 C 0.024 3.976 14 C -0.055 4.055 15 C -0.071 4.071 16 C -0.137 4.137 17 C -0.134 4.134 18 C -0.137 4.137 19 C -0.133 4.133 20 C -0.127 4.127 21 C -0.177 4.177 22 C 0.029 3.971 23 H 0.130 0.870 24 F -0.184 7.184 25 C -0.193 4.193 26 C -0.225 4.225 27 C -0.092 4.092 28 H 0.226 0.774 29 H 0.130 0.870 30 H -0.183 1.183 31 H -0.180 1.180 32 H 0.152 0.848 33 H 0.154 0.846 34 H 0.114 0.886 35 H 0.113 0.887 36 H 0.238 0.762 37 H 0.098 0.902 38 H 0.097 0.903 39 H 0.144 0.856 40 H 0.141 0.859 41 H 0.140 0.860 42 H 0.141 0.859 43 H 0.140 0.860 44 H 0.122 0.878 45 H 0.107 0.893 46 H 0.104 0.896 47 H 0.124 0.876 48 H 0.150 0.850 49 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges 2.335 4.199 1.314 4.981 hybrid contribution 0.515 0.123 -0.020 0.530 sum 2.850 4.322 1.294 5.336 Atomic orbital electron populations 1.86509 1.17161 1.81693 1.49235 1.24978 0.85192 1.09869 0.97395 0.94881 0.80958 0.78196 0.87328 1.20254 1.02534 0.95191 0.97794 1.20867 0.96345 0.93470 0.96200 1.20538 1.01211 1.01090 0.93552 1.19068 0.94339 0.90983 0.86732 1.86170 1.68464 1.36582 1.28795 1.22451 0.97903 0.94007 0.89478 1.19990 0.78454 0.88462 0.82946 1.90799 1.53455 1.16119 1.78109 1.45671 1.57189 1.13776 1.21087 1.21159 0.98829 0.92314 0.85294 1.20796 0.93220 0.97326 0.94206 1.19372 0.94499 0.93536 0.99655 1.21122 0.97559 0.94724 1.00312 1.21188 0.93790 0.99946 0.98494 1.21245 0.99540 0.93558 0.99390 1.21200 0.97027 0.95762 0.99354 1.20986 0.93639 0.99629 0.98414 1.23698 0.98149 1.01691 0.94176 1.23098 0.99514 0.96495 0.77976 0.87030 1.92834 1.97701 1.88532 1.39342 1.23813 1.00271 0.97742 0.97438 1.21173 1.06906 0.93648 1.00781 1.20764 0.96438 0.98988 0.92990 0.77402 0.87006 1.18321 1.17976 0.84789 0.84625 0.88636 0.88734 0.76188 0.90229 0.90295 0.85632 0.85855 0.85962 0.85886 0.86045 0.87827 0.89285 0.89581 0.87642 0.85047 0.85293 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.11 12.83 -35.23 -0.45 -0.56 16 2 C -0.06 0.02 2.80 36.00 0.10 0.12 16 3 Si 0.68 -0.89 29.80 -169.99 -5.07 -5.95 16 4 C -0.16 -0.01 5.35 -104.60 -0.56 -0.57 16 5 C -0.05 -0.04 9.68 -39.60 -0.38 -0.42 16 6 C -0.15 -0.22 9.99 -39.43 -0.39 -0.61 16 7 C 0.13 0.18 6.69 -39.22 -0.26 -0.08 16 8 O -0.29 -0.68 9.67 -39.33 -0.38 -1.06 16 9 C 0.04 -0.06 5.22 36.01 0.19 0.13 16 10 C 0.52 0.30 7.91 -10.99 -0.09 0.21 16 11 O -0.51 -2.82 16.50 -14.35 -0.24 -3.06 16 12 N -0.72 1.79 5.16 -60.29 -0.31 1.48 16 13 C 0.15 -0.32 4.77 -4.04 -0.02 -0.34 16 14 C -0.05 0.17 0.67 -154.71 -0.10 0.07 16 15 C -0.07 0.14 4.69 -104.62 -0.49 -0.35 16 16 C -0.12 0.26 9.14 -39.59 -0.36 -0.10 16 17 C -0.12 0.18 10.05 -39.59 -0.40 -0.21 16 18 C -0.12 0.13 10.05 -39.59 -0.40 -0.27 16 19 C -0.12 0.10 10.05 -39.58 -0.40 -0.29 16 20 C -0.11 0.13 9.28 -39.58 -0.37 -0.24 16 21 C -0.14 0.36 7.12 -25.77 -0.18 0.17 16 22 C 0.07 -0.13 5.31 -25.92 -0.14 -0.27 16 23 H 0.11 -0.35 7.61 -51.93 -0.40 -0.75 16 24 F -0.20 -0.29 17.41 2.25 0.04 -0.25 16 25 C -0.16 0.53 6.25 -25.92 -0.16 0.37 16 26 C -0.21 0.15 9.04 -39.43 -0.36 -0.21 16 27 C -0.07 0.07 8.66 -39.61 -0.34 -0.28 16 28 H 0.38 -1.39 8.70 45.56 0.40 -0.99 16 29 H 0.11 0.02 7.96 -51.93 -0.41 -0.40 16 30 H -0.26 -0.26 7.11 56.52 0.40 0.14 16 31 H -0.25 -0.54 7.11 56.52 0.40 -0.13 16 32 H 0.13 0.00 8.06 -52.49 -0.42 -0.42 16 33 H 0.14 0.15 8.06 -52.49 -0.42 -0.27 16 34 H 0.10 -0.40 7.65 -51.93 -0.40 -0.80 16 35 H 0.09 -0.34 7.67 -51.93 -0.40 -0.74 16 36 H 0.40 -1.93 8.22 -40.82 -0.34 -2.26 16 37 H 0.08 -0.09 7.27 -51.93 -0.38 -0.47 16 38 H 0.08 -0.15 7.31 -51.93 -0.38 -0.53 16 39 H 0.13 -0.47 5.96 -52.49 -0.31 -0.78 16 40 H 0.12 -0.37 8.06 -52.48 -0.42 -0.79 16 41 H 0.12 -0.28 8.06 -52.49 -0.42 -0.71 16 42 H 0.12 -0.25 8.06 -52.49 -0.42 -0.67 16 43 H 0.12 -0.23 7.46 -52.49 -0.39 -0.62 16 44 H 0.10 -0.18 8.10 -51.93 -0.42 -0.60 16 45 H 0.09 -0.29 8.10 -51.93 -0.42 -0.71 16 46 H 0.09 -0.38 7.90 -51.93 -0.41 -0.79 16 47 H 0.11 -0.35 6.23 -51.93 -0.32 -0.67 16 48 H 0.13 -0.46 6.30 -52.48 -0.33 -0.79 16 49 H 0.13 -0.40 4.90 -52.48 -0.26 -0.66 16 LS Contribution 405.94 15.07 6.12 6.12 Total: 0.00 -9.99 405.94 -11.89 -21.87 By element: Atomic # 1 Polarization: -8.93 SS G_CDS: -6.48 Total: -15.41 kcal Atomic # 6 Polarization: 1.94 SS G_CDS: -5.12 Total: -3.17 kcal Atomic # 7 Polarization: 1.79 SS G_CDS: -0.31 Total: 1.48 kcal Atomic # 8 Polarization: -3.61 SS G_CDS: -1.07 Total: -4.68 kcal Atomic # 9 Polarization: -0.29 SS G_CDS: 0.04 Total: -0.25 kcal Atomic # 14 Polarization: -0.89 SS G_CDS: -5.07 Total: -5.95 kcal Total LS contribution 6.12 Total: 6.12 kcal Total: -9.99 -11.89 -21.87 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13458982_2989410.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -43.849 kcal (2) G-P(sol) polarization free energy of solvation -9.988 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -53.837 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.886 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.873 kcal (6) G-S(sol) free energy of system = (1) + (5) -65.722 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.98 seconds