Wall clock time and date at job start Sat Mar 6 2021 21:29:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86301 * 109.47401 * 2 1 4 4 C 1.50695 * 109.46736 * 119.99944 * 2 1 3 5 5 C 1.38273 * 119.94627 * 65.00033 * 4 2 1 6 6 C 1.38147 * 120.05621 * 179.97438 * 5 4 2 7 7 C 1.38730 * 119.94655 * 0.02562 * 6 5 4 8 8 O 1.35898 * 120.06093 * 180.02562 * 7 6 5 9 9 C 1.42897 * 117.00430 * 179.97438 * 8 7 6 10 10 C 1.50702 * 109.47144 * 179.97438 * 9 8 7 11 11 O 1.21281 * 119.99693 * 0.02562 * 10 9 8 12 12 N 1.34773 * 119.99671 * 180.02562 * 10 9 8 13 13 C 1.46501 * 119.99728 * 180.02562 * 12 10 9 14 14 C 1.52997 * 109.47227 * 180.75093 * 13 12 10 15 15 C 1.50703 * 112.90529 * 293.94103 * 14 13 12 16 16 C 1.38235 * 120.00233 * 124.50649 * 15 14 13 17 17 C 1.38229 * 119.99902 * 179.76555 * 16 15 14 18 18 C 1.38231 * 120.00427 * 0.50479 * 17 16 15 19 19 C 1.38234 * 119.99627 * 359.74710 * 18 17 16 20 20 C 1.38236 * 120.00385 * 359.97438 * 19 18 17 21 21 C 1.54055 * 113.61663 * 162.68497 * 14 13 12 22 22 C 1.53785 * 86.98198 * 270.88446 * 21 14 13 23 23 H 1.09001 * 113.61344 * 89.15958 * 22 21 14 24 24 F 1.39901 * 113.60908 * 219.97961 * 22 21 14 25 25 C 1.53774 * 113.61723 * 65.18969 * 14 13 12 26 26 C 1.38733 * 119.88449 * 0.27303 * 7 6 5 27 27 C 1.38142 * 119.94675 * 359.47293 * 26 7 6 28 28 H 0.96700 * 114.00134 * 300.00672 * 1 2 3 29 29 H 1.09001 * 109.46886 * 239.99913 * 2 1 3 30 30 H 1.48500 * 109.99726 * 178.68177 * 3 2 1 31 31 H 1.48502 * 109.99614 * 299.99696 * 3 2 1 32 32 H 1.07996 * 119.96856 * 359.97184 * 5 4 2 33 33 H 1.07996 * 120.02522 * 179.97438 * 6 5 4 34 34 H 1.08999 * 109.46965 * 59.99949 * 9 8 7 35 35 H 1.08997 * 109.47036 * 300.00462 * 9 8 7 36 36 H 0.96999 * 120.00457 * 359.97438 * 12 10 9 37 37 H 1.09002 * 109.47612 * 60.74799 * 13 12 10 38 38 H 1.09000 * 109.46897 * 300.74909 * 13 12 10 39 39 H 1.08000 * 119.99502 * 0.02562 * 16 15 14 40 40 H 1.08007 * 120.00032 * 180.22600 * 17 16 15 41 41 H 1.07998 * 120.00600 * 179.72919 * 18 17 16 42 42 H 1.07999 * 119.99897 * 179.97438 * 19 18 17 43 43 H 1.07992 * 120.00200 * 179.97438 * 20 19 18 44 44 H 1.08992 * 113.61707 * 156.37850 * 21 14 13 45 45 H 1.09003 * 113.68915 * 25.39478 * 21 14 13 46 46 H 1.09004 * 113.61479 * 334.57359 * 25 14 13 47 47 H 1.08996 * 113.62137 * 203.66575 * 25 14 13 48 48 H 1.08008 * 120.02938 * 179.72728 * 26 7 6 49 49 H 1.08006 * 119.97331 * 180.23474 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.6839 -2.0605 1.3973 6 6 2.1437 -2.7142 2.5241 7 6 2.8537 -2.0147 3.4891 8 8 3.3076 -2.6555 4.5983 9 6 4.0315 -1.8724 5.5494 10 6 4.4512 -2.7457 6.7037 11 8 4.1595 -3.9229 6.7108 12 7 5.1507 -2.2184 7.7280 13 6 5.5592 -3.0675 8.8498 14 6 6.3174 -2.2250 9.8774 15 6 7.6315 -1.7047 9.3545 16 6 7.8963 -0.3481 9.3775 17 6 9.1036 0.1286 8.9023 18 6 10.0421 -0.7502 8.3944 19 6 9.7752 -2.1062 8.3665 20 6 8.5702 -2.5836 8.8471 21 6 6.4243 -2.8902 11.2628 22 6 5.0906 -2.2051 11.6046 23 1 4.2150 -2.8000 11.3447 24 9 5.0376 -1.7012 12.9087 25 6 5.4514 -1.1464 10.5493 26 6 3.0952 -0.6588 3.3224 27 6 2.6379 -0.0109 2.1913 28 1 -0.3933 0.4418 0.7650 29 1 1.7923 -0.5139 -0.8900 30 1 3.5347 1.7701 0.0321 31 1 1.5616 2.4678 -1.2086 32 1 1.1307 -2.6045 0.6460 33 1 1.9499 -3.7686 2.6541 34 1 3.3954 -1.0669 5.9163 35 1 4.9158 -1.4488 5.0734 36 1 5.3843 -1.2770 7.7221 37 1 6.2065 -3.8650 8.4851 38 1 4.6755 -3.5020 9.3172 39 1 7.1615 0.3388 9.7706 40 1 9.3120 1.1881 8.9236 41 1 10.9836 -0.3773 8.0190 42 1 10.5082 -2.7928 7.9694 43 1 8.3616 -3.6430 8.8249 44 1 7.2647 -2.5304 11.8563 45 1 6.3612 -3.9780 11.2324 46 1 4.6034 -0.8273 9.9434 47 1 6.0263 -0.3106 10.9481 48 1 3.6439 -0.1110 4.0743 49 1 2.8289 1.0439 2.0592 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13458982_2989410.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:29:03 Heat of formation + Delta-G solvation = -62.900705 kcal Electronic energy + Delta-G solvation = -32720.669818 eV Core-core repulsion = 28109.171459 eV Total energy + Delta-G solvation = -4611.498358 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 372.157 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -48.57136 -41.78904 -41.33128 -40.32883 -39.04183 -38.67517 -37.11342 -35.43929 -32.44678 -32.07797 -31.84185 -31.74613 -30.32490 -27.92405 -27.04198 -26.16903 -25.01237 -23.94724 -23.23932 -22.50581 -22.36217 -21.64968 -19.98209 -19.49774 -18.61248 -18.28228 -18.04041 -17.48112 -17.43117 -17.08063 -16.76542 -16.55014 -16.38281 -16.05350 -15.90358 -15.75668 -15.62358 -15.51227 -15.43663 -14.96712 -14.64879 -14.56418 -14.47982 -14.32583 -14.29497 -13.75797 -13.68612 -13.61123 -13.53411 -13.41746 -13.28743 -12.50473 -12.47140 -12.24805 -12.17021 -12.08368 -12.04554 -11.75361 -11.73128 -11.33962 -11.26591 -11.05466 -10.39539 -10.24110 -10.04536 -9.82592 -9.64324 -9.23597 -4.98773 0.27362 0.30437 0.40172 0.49396 1.34573 1.42151 1.44915 1.65944 1.99844 2.54018 2.65410 2.81857 3.14895 3.24905 3.41922 3.48265 3.57337 3.61001 3.63311 3.75368 3.83479 3.87018 3.95285 4.03203 4.07720 4.10499 4.12976 4.20716 4.28556 4.30754 4.42284 4.47451 4.49763 4.60206 4.64500 4.65920 4.67120 4.70532 4.73513 4.87286 4.95989 4.97048 5.09517 5.14736 5.15319 5.24304 5.25224 5.28519 5.49841 5.58429 5.64406 5.65153 5.69106 6.09510 6.24390 6.42345 6.80697 7.07551 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.559 6.559 2 C -0.074 4.074 3 Si 0.782 3.218 4 C -0.162 4.162 5 C -0.062 4.062 6 C -0.167 4.167 7 C 0.121 3.879 8 O -0.319 6.319 9 C 0.036 3.964 10 C 0.515 3.485 11 O -0.571 6.571 12 N -0.704 5.704 13 C 0.147 3.853 14 C -0.040 4.040 15 C -0.071 4.071 16 C -0.120 4.120 17 C -0.124 4.124 18 C -0.132 4.132 19 C -0.131 4.131 20 C -0.122 4.122 21 C -0.140 4.140 22 C 0.054 3.946 23 H 0.122 0.878 24 F -0.224 7.224 25 C -0.146 4.146 26 C -0.200 4.200 27 C -0.074 4.074 28 H 0.395 0.605 29 H 0.102 0.898 30 H -0.283 1.283 31 H -0.304 1.304 32 H 0.132 0.868 33 H 0.126 0.874 34 H 0.130 0.870 35 H 0.122 0.878 36 H 0.418 0.582 37 H 0.067 0.933 38 H 0.077 0.923 39 H 0.145 0.855 40 H 0.138 0.862 41 H 0.130 0.870 42 H 0.126 0.874 43 H 0.121 0.879 44 H 0.096 0.904 45 H 0.093 0.907 46 H 0.102 0.898 47 H 0.109 0.891 48 H 0.166 0.834 49 H 0.156 0.844 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.211 7.436 2.766 8.236 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.367 6.367 2 C -0.183 4.183 3 Si 0.688 3.312 4 C -0.162 4.162 5 C -0.080 4.080 6 C -0.186 4.186 7 C 0.076 3.924 8 O -0.232 6.232 9 C -0.042 4.042 10 C 0.301 3.699 11 O -0.449 6.449 12 N -0.358 5.358 13 C 0.024 3.976 14 C -0.041 4.041 15 C -0.071 4.071 16 C -0.138 4.138 17 C -0.142 4.142 18 C -0.150 4.150 19 C -0.149 4.149 20 C -0.140 4.140 21 C -0.179 4.179 22 C 0.019 3.981 23 H 0.140 0.860 24 F -0.205 7.205 25 C -0.183 4.183 26 C -0.218 4.218 27 C -0.091 4.091 28 H 0.245 0.755 29 H 0.119 0.881 30 H -0.209 1.209 31 H -0.233 1.233 32 H 0.150 0.850 33 H 0.144 0.856 34 H 0.148 0.852 35 H 0.139 0.861 36 H 0.256 0.744 37 H 0.085 0.915 38 H 0.095 0.905 39 H 0.162 0.838 40 H 0.155 0.845 41 H 0.148 0.852 42 H 0.144 0.856 43 H 0.139 0.861 44 H 0.115 0.885 45 H 0.111 0.889 46 H 0.120 0.880 47 H 0.127 0.873 48 H 0.183 0.817 49 H 0.173 0.827 Dipole moment (debyes) X Y Z Total from point charges 2.547 6.667 1.917 7.390 hybrid contribution 0.477 -0.655 -0.206 0.836 sum 3.023 6.012 1.712 6.944 Atomic orbital electron populations 1.86470 1.17479 1.82230 1.50491 1.25190 0.85156 1.11048 0.96941 0.93804 0.77720 0.74846 0.84799 1.20361 1.02758 0.94876 0.98240 1.20914 0.96802 0.94156 0.96102 1.20616 1.02424 1.01034 0.94497 1.19201 0.94707 0.91948 0.86528 1.86125 1.69148 1.38367 1.29592 1.22736 0.99370 0.93736 0.88336 1.20461 0.77817 0.87920 0.83679 1.90776 1.56027 1.18668 1.79433 1.45535 1.55768 1.14393 1.20134 1.21120 0.98630 0.92366 0.85504 1.20590 0.92766 0.97240 0.93466 1.19444 0.94577 0.93686 0.99425 1.21350 0.97810 0.94816 0.99784 1.21439 0.93844 1.00678 0.98212 1.21449 1.00224 0.93616 0.99724 1.21364 0.97399 0.96232 0.99878 1.21116 0.93999 0.99955 0.98921 1.23693 0.97730 1.02074 0.94360 1.23372 1.00114 0.97425 0.77236 0.85997 1.92790 1.97802 1.88876 1.40997 1.23796 1.00574 0.97253 0.96708 1.21513 1.06197 0.92721 1.01381 1.21063 0.95483 1.00142 0.92420 0.75510 0.88090 1.20934 1.23250 0.85033 0.85617 0.85230 0.86085 0.74438 0.91464 0.90455 0.83783 0.84453 0.85202 0.85554 0.86075 0.88546 0.88867 0.87985 0.87289 0.81702 0.82737 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.20 12.83 -148.98 -1.91 -2.12 16 2 C -0.07 0.06 2.80 71.23 0.20 0.26 16 3 Si 0.78 -2.79 29.80 68.60 2.04 -0.75 16 4 C -0.16 0.03 5.35 -19.85 -0.11 -0.08 16 5 C -0.06 -0.17 9.68 22.26 0.22 0.05 16 6 C -0.17 -0.75 9.99 22.37 0.22 -0.53 16 7 C 0.12 0.32 6.69 22.51 0.15 0.47 16 8 O -0.32 -1.57 9.67 -73.37 -0.71 -2.28 16 9 C 0.04 -0.16 5.22 71.24 0.37 0.21 16 10 C 0.52 0.49 7.91 87.66 0.69 1.18 16 11 O -0.57 -7.14 16.50 16.00 0.26 -6.88 16 12 N -0.70 4.15 5.16 -463.06 -2.39 1.76 16 13 C 0.15 -0.64 4.77 86.38 0.41 -0.23 16 14 C -0.04 0.27 0.67 -52.31 -0.04 0.24 16 15 C -0.07 0.33 4.69 -19.86 -0.09 0.24 16 16 C -0.12 0.69 9.14 22.27 0.20 0.89 16 17 C -0.12 0.53 10.05 22.27 0.22 0.75 16 18 C -0.13 0.32 10.05 22.27 0.22 0.54 16 19 C -0.13 0.18 10.05 22.27 0.22 0.41 16 20 C -0.12 0.25 9.28 22.27 0.21 0.45 16 21 C -0.14 0.71 7.12 31.22 0.22 0.93 16 22 C 0.05 -0.24 5.31 31.12 0.17 -0.07 16 23 H 0.12 -0.81 7.61 -2.39 -0.02 -0.83 16 24 F -0.22 -0.64 17.41 44.97 0.78 0.14 16 25 C -0.15 1.21 6.25 31.12 0.19 1.40 16 26 C -0.20 0.70 9.04 22.37 0.20 0.90 16 27 C -0.07 0.27 8.66 22.25 0.19 0.46 16 28 H 0.39 -3.14 8.70 -74.06 -0.64 -3.78 16 29 H 0.10 0.10 7.96 -2.39 -0.02 0.08 16 30 H -0.28 -0.16 7.11 99.48 0.71 0.55 16 31 H -0.30 -1.42 7.11 99.48 0.71 -0.72 16 32 H 0.13 0.26 8.06 -2.91 -0.02 0.24 16 33 H 0.13 0.64 8.06 -2.91 -0.02 0.62 16 34 H 0.13 -1.50 7.65 -2.39 -0.02 -1.52 16 35 H 0.12 -1.21 7.67 -2.39 -0.02 -1.22 16 36 H 0.42 -4.92 8.22 -92.71 -0.76 -5.68 16 37 H 0.07 -0.09 7.27 -2.39 -0.02 -0.10 16 38 H 0.08 -0.27 7.31 -2.39 -0.02 -0.29 16 39 H 0.14 -1.42 5.96 -2.91 -0.02 -1.43 16 40 H 0.14 -1.04 8.06 -2.91 -0.02 -1.06 16 41 H 0.13 -0.62 8.06 -2.91 -0.02 -0.65 16 42 H 0.13 -0.40 8.06 -2.91 -0.02 -0.42 16 43 H 0.12 -0.33 7.46 -2.91 -0.02 -0.35 16 44 H 0.10 -0.31 8.10 -2.39 -0.02 -0.33 16 45 H 0.09 -0.56 8.10 -2.39 -0.02 -0.58 16 46 H 0.10 -1.14 7.90 -2.38 -0.02 -1.16 16 47 H 0.11 -0.92 6.23 -2.39 -0.01 -0.94 16 48 H 0.17 -1.81 6.30 -2.91 -0.02 -1.83 16 49 H 0.16 -1.44 4.90 -2.91 -0.01 -1.45 16 Total: 0.00 -26.30 405.94 1.81 -24.50 By element: Atomic # 1 Polarization: -22.50 SS G_CDS: -0.36 Total: -22.86 kcal Atomic # 6 Polarization: 4.40 SS G_CDS: 4.09 Total: 8.49 kcal Atomic # 7 Polarization: 4.15 SS G_CDS: -2.39 Total: 1.76 kcal Atomic # 8 Polarization: -8.92 SS G_CDS: -2.36 Total: -11.28 kcal Atomic # 9 Polarization: -0.64 SS G_CDS: 0.78 Total: 0.14 kcal Atomic # 14 Polarization: -2.79 SS G_CDS: 2.04 Total: -0.75 kcal Total: -26.30 1.81 -24.50 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13458982_2989410.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -38.404 kcal (2) G-P(sol) polarization free energy of solvation -26.303 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -64.707 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.806 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.497 kcal (6) G-S(sol) free energy of system = (1) + (5) -62.901 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds