Wall clock time and date at job start Sat Mar 6 2021 21:29:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42891 * 1 3 3 Si 1.86302 * 109.47043 * 2 1 4 4 C 1.50701 * 109.47196 * 240.00610 * 2 1 3 5 5 C 1.38243 * 119.97584 * 119.99552 * 4 2 1 6 6 C 1.38290 * 120.11268 * 180.02562 * 5 4 2 7 7 C 1.38125 * 120.05479 * 0.02562 * 6 5 4 8 8 C 1.38750 * 119.94454 * 359.97061 * 7 6 5 9 9 O 1.35897 * 120.05573 * 180.02562 * 8 7 6 10 10 C 1.42899 * 116.99924 * 0.02562 * 9 8 7 11 11 C 1.53003 * 109.47211 * 179.97438 * 10 9 8 12 12 C 1.50700 * 109.47398 * 180.02562 * 11 10 9 13 13 O 1.21281 * 119.99631 * 0.02562 * 12 11 10 14 14 N 1.34777 * 120.00058 * 179.97438 * 12 11 10 15 15 C 1.46497 * 119.99706 * 180.02562 * 14 12 11 16 16 C 1.53003 * 109.46906 * 182.13774 * 15 14 12 17 17 C 1.50703 * 112.84839 * 295.01273 * 16 15 14 18 18 C 1.38237 * 119.99760 * 293.89354 * 17 16 15 19 19 C 1.38237 * 119.99567 * 179.97438 * 18 17 16 20 20 C 1.38236 * 120.00267 * 0.07672 * 19 18 17 21 21 C 1.38233 * 119.99673 * 359.88172 * 20 19 18 22 22 C 1.38227 * 119.99934 * 113.87361 * 17 16 15 23 23 C 1.53784 * 113.61282 * 163.81584 * 16 15 14 24 24 C 1.53947 * 87.01916 * 270.77000 * 23 16 15 25 25 H 1.09004 * 113.54012 * 89.19145 * 24 23 16 26 26 F 1.39905 * 113.74343 * 220.05649 * 24 23 16 27 27 C 1.53775 * 113.61391 * 66.21067 * 16 15 14 28 28 C 1.38173 * 119.96889 * 300.25192 * 4 2 1 29 29 H 0.96697 * 114.00543 * 59.99981 * 1 2 3 30 30 H 1.08998 * 109.47827 * 120.00059 * 2 1 3 31 31 H 1.48498 * 110.00170 * 298.68829 * 3 2 1 32 32 H 1.48505 * 109.99564 * 60.00309 * 3 2 1 33 33 H 1.07998 * 119.94064 * 0.02562 * 5 4 2 34 34 H 1.08001 * 119.97099 * 179.97438 * 6 5 4 35 35 H 1.07995 * 120.02605 * 179.97438 * 7 6 5 36 36 H 1.09001 * 109.47246 * 60.00288 * 10 9 8 37 37 H 1.09003 * 109.47413 * 299.99913 * 10 9 8 38 38 H 1.09002 * 109.47161 * 59.99696 * 11 10 9 39 39 H 1.09003 * 109.46902 * 300.00276 * 11 10 9 40 40 H 0.96996 * 120.00031 * 0.02562 * 14 12 11 41 41 H 1.09004 * 109.47234 * 62.13995 * 15 14 12 42 42 H 1.08999 * 109.47549 * 302.13903 * 15 14 12 43 43 H 1.08006 * 120.00227 * 359.70768 * 18 17 16 44 44 H 1.07999 * 119.99360 * 179.97438 * 19 18 17 45 45 H 1.07995 * 119.99664 * 179.97438 * 20 19 18 46 46 H 1.08005 * 119.99801 * 180.11337 * 21 20 19 47 47 H 1.08004 * 119.99975 * 359.97438 * 22 17 16 48 48 H 1.09001 * 113.61502 * 25.34783 * 23 16 15 49 49 H 1.09003 * 113.60867 * 156.24857 * 23 16 15 50 50 H 1.09000 * 113.61266 * 203.74624 * 27 16 15 51 51 H 1.08999 * 113.61475 * 334.56501 * 27 16 15 52 52 H 1.07997 * 120.02890 * 359.97438 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 2.7259 -0.0378 -2.1402 6 6 3.1880 -0.6867 -3.2706 7 6 2.8560 -2.0088 -3.4937 8 6 2.0586 -2.6859 -2.5823 9 8 1.7310 -3.9868 -2.7993 10 6 2.2428 -4.5953 -3.9866 11 6 1.7724 -6.0495 -4.0580 12 6 2.3127 -6.6915 -5.3098 13 8 3.0061 -6.0492 -6.0698 14 7 2.0261 -7.9795 -5.5842 15 6 2.5518 -8.6036 -6.8008 16 6 2.0384 -10.0416 -6.8991 17 6 2.5543 -10.9241 -5.7917 18 6 3.9023 -11.2207 -5.7154 19 6 4.3755 -12.0297 -4.6994 20 6 3.5005 -12.5434 -3.7605 21 6 2.1527 -12.2461 -3.8363 22 6 1.6795 -11.4365 -4.8520 23 6 2.1935 -10.6567 -8.3000 24 6 0.8007 -10.0834 -8.6181 25 1 0.8282 -9.0704 -9.0195 26 9 -0.0043 -10.9446 -9.3715 27 6 0.5180 -10.1399 -7.1076 28 6 1.5928 -2.0316 -1.4513 29 1 -0.3934 0.4417 -0.7650 30 1 1.7924 -0.5138 0.8899 31 1 1.5876 2.4586 -1.2241 32 1 1.5614 2.4678 1.2086 33 1 2.9863 0.9960 -1.9676 34 1 3.8084 -0.1590 -3.9799 35 1 3.2168 -2.5149 -4.3769 36 1 3.3323 -4.5668 -3.9689 37 1 1.8792 -4.0523 -4.8590 38 1 0.6829 -6.0786 -4.0754 39 1 2.1364 -6.5923 -3.1856 40 1 1.4719 -8.4932 -4.9761 41 1 3.6413 -8.6085 -6.7652 42 1 2.2194 -8.0389 -7.6718 43 1 4.5851 -10.8238 -6.4522 44 1 5.4286 -12.2618 -4.6401 45 1 3.8703 -13.1758 -2.9670 46 1 1.4693 -12.6459 -3.1017 47 1 0.6264 -11.2042 -4.9112 48 1 2.9955 -10.2091 -8.8870 49 1 2.2270 -11.7462 -8.2971 50 1 0.0926 -11.0879 -6.7782 51 1 -0.0309 -9.2764 -6.7321 52 1 0.9689 -2.5554 -0.7423 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13458982_4549614.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:29:11 Heat of formation + Delta-G solvation = -72.551054 kcal Electronic energy + Delta-G solvation = -34355.033392 eV Core-core repulsion = 29587.578944 eV Total energy + Delta-G solvation = -4767.454448 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.173 amu Computer time = 1.26 seconds Orbital eigenvalues (eV) -48.59264 -41.72164 -41.31147 -40.45115 -39.17493 -38.75408 -37.39336 -35.39277 -33.37297 -32.48504 -32.03619 -31.85445 -30.91559 -28.68788 -27.16519 -26.96037 -25.51797 -24.54444 -23.67921 -23.22626 -22.52584 -22.08681 -21.41850 -19.94811 -19.34376 -18.46312 -18.16336 -17.75234 -17.53456 -17.51351 -17.12326 -17.01610 -16.77036 -16.55083 -16.31353 -16.13839 -16.01902 -15.59872 -15.52363 -15.44124 -15.03364 -14.81256 -14.71371 -14.47818 -14.40134 -14.28201 -14.13151 -13.96266 -13.64562 -13.52351 -13.36878 -13.22266 -12.93166 -12.86317 -12.51704 -12.44388 -12.39528 -12.20310 -12.00021 -11.82626 -11.79689 -11.58311 -11.34707 -11.27835 -11.11048 -10.68388 -10.19766 -9.94140 -9.83095 -9.65478 -9.28195 -4.90242 0.19032 0.38578 0.40041 0.48593 1.29645 1.49700 1.62303 1.66998 1.96542 2.42805 2.65382 2.81686 3.12455 3.24216 3.40199 3.42519 3.51548 3.56801 3.61169 3.64432 3.84114 3.85468 3.87897 3.96716 4.09000 4.10981 4.12247 4.19728 4.23118 4.27449 4.29211 4.38912 4.47762 4.55321 4.60111 4.62195 4.63607 4.65440 4.66079 4.70109 4.71480 4.75259 4.85333 4.94593 4.97652 5.09080 5.14098 5.25231 5.26085 5.29791 5.37352 5.43250 5.57549 5.63170 5.64161 5.69652 6.08920 6.31700 6.39836 6.46930 7.09278 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.548 6.548 2 C -0.087 4.087 3 Si 0.775 3.225 4 C -0.082 4.082 5 C -0.157 4.157 6 C -0.075 4.075 7 C -0.210 4.210 8 C 0.117 3.883 9 O -0.325 6.325 10 C 0.075 3.925 11 C -0.134 4.134 12 C 0.523 3.477 13 O -0.580 6.580 14 N -0.711 5.711 15 C 0.147 3.853 16 C -0.041 4.041 17 C -0.071 4.071 18 C -0.121 4.121 19 C -0.129 4.129 20 C -0.133 4.133 21 C -0.125 4.125 22 C -0.122 4.122 23 C -0.139 4.139 24 C 0.054 3.946 25 H 0.124 0.876 26 F -0.224 7.224 27 C -0.147 4.147 28 C -0.142 4.142 29 H 0.386 0.614 30 H 0.126 0.874 31 H -0.281 1.281 32 H -0.302 1.302 33 H 0.148 0.852 34 H 0.153 0.847 35 H 0.137 0.863 36 H 0.066 0.934 37 H 0.066 0.934 38 H 0.126 0.874 39 H 0.122 0.878 40 H 0.415 0.585 41 H 0.068 0.932 42 H 0.078 0.922 43 H 0.126 0.874 44 H 0.129 0.871 45 H 0.130 0.870 46 H 0.136 0.864 47 H 0.140 0.860 48 H 0.096 0.904 49 H 0.095 0.905 50 H 0.103 0.897 51 H 0.098 0.902 52 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.851 -1.702 0.736 2.620 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.356 6.356 2 C -0.195 4.195 3 Si 0.680 3.320 4 C -0.082 4.082 5 C -0.174 4.174 6 C -0.093 4.093 7 C -0.229 4.229 8 C 0.071 3.929 9 O -0.239 6.239 10 C -0.001 4.001 11 C -0.174 4.174 12 C 0.310 3.690 13 O -0.460 6.460 14 N -0.363 5.363 15 C 0.023 3.977 16 C -0.042 4.042 17 C -0.072 4.072 18 C -0.139 4.139 19 C -0.147 4.147 20 C -0.151 4.151 21 C -0.143 4.143 22 C -0.140 4.140 23 C -0.177 4.177 24 C 0.019 3.981 25 H 0.141 0.859 26 F -0.205 7.205 27 C -0.184 4.184 28 C -0.160 4.160 29 H 0.236 0.764 30 H 0.143 0.857 31 H -0.208 1.208 32 H -0.231 1.231 33 H 0.165 0.835 34 H 0.171 0.829 35 H 0.155 0.845 36 H 0.084 0.916 37 H 0.084 0.916 38 H 0.144 0.856 39 H 0.141 0.859 40 H 0.252 0.748 41 H 0.087 0.913 42 H 0.096 0.904 43 H 0.144 0.856 44 H 0.147 0.853 45 H 0.148 0.852 46 H 0.154 0.846 47 H 0.158 0.842 48 H 0.115 0.885 49 H 0.114 0.886 50 H 0.122 0.878 51 H 0.116 0.884 52 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges 2.083 -0.922 0.817 2.420 hybrid contribution -1.161 -0.776 -0.526 1.492 sum 0.922 -1.698 0.291 1.955 Atomic orbital electron populations 1.86567 1.18452 1.80465 1.50141 1.25344 0.83519 1.12238 0.98381 0.93908 0.90309 0.71365 0.76395 1.20170 0.97668 0.93508 0.96884 1.21174 1.00282 1.00859 0.95107 1.21250 0.97608 0.93401 0.97051 1.21554 1.03125 0.97092 1.01145 1.19142 0.95272 0.83493 0.94949 1.85953 1.71407 1.22835 1.43712 1.22434 0.98981 0.93087 0.85553 1.21437 1.04949 0.94063 0.96938 1.20514 0.79601 0.81896 0.87005 1.90744 1.40007 1.63729 1.51514 1.45740 1.53538 1.11543 1.25528 1.21114 0.98906 0.89976 0.87654 1.20575 0.96415 0.93195 0.93974 1.19468 0.93512 0.98276 0.95899 1.21136 0.95381 0.98647 0.98756 1.21384 1.00537 0.97718 0.95105 1.21452 0.94065 1.00144 0.99402 1.21431 0.95897 0.98206 0.98782 1.21296 1.00373 0.97888 0.94397 1.23657 0.97305 1.02292 0.94430 1.23401 0.90097 0.93751 0.90880 0.85878 1.92789 1.75795 1.72962 1.78949 1.23756 0.95079 1.05197 0.94388 1.20319 1.03734 0.94682 0.97300 0.76450 0.85671 1.20794 1.23077 0.83460 0.82937 0.84523 0.91602 0.91552 0.85571 0.85943 0.74847 0.91344 0.90394 0.85647 0.85275 0.85167 0.84625 0.84180 0.88530 0.88627 0.87815 0.88362 0.85480 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -2.01 12.76 -148.98 -1.90 -3.91 16 2 C -0.09 -0.04 2.82 71.24 0.20 0.16 16 3 Si 0.78 -1.41 29.79 68.60 2.04 0.63 16 4 C -0.08 -0.15 5.39 -19.88 -0.11 -0.26 16 5 C -0.16 0.06 8.67 22.28 0.19 0.25 16 6 C -0.08 0.00 10.04 22.26 0.22 0.22 16 7 C -0.21 -0.58 9.04 22.37 0.20 -0.38 16 8 C 0.12 0.60 6.69 22.51 0.15 0.75 16 9 O -0.32 -1.43 10.14 -92.39 -0.94 -2.37 16 10 C 0.07 0.07 4.03 71.98 0.29 0.36 16 11 C -0.13 0.55 6.07 29.85 0.18 0.73 16 12 C 0.52 -0.16 7.83 87.66 0.69 0.53 16 13 O -0.58 -4.71 15.98 -3.03 -0.05 -4.76 16 14 N -0.71 3.55 5.19 -463.06 -2.40 1.15 16 15 C 0.15 -0.62 4.84 86.38 0.42 -0.20 16 16 C -0.04 0.25 0.62 -52.40 -0.03 0.21 16 17 C -0.07 0.27 4.53 -19.87 -0.09 0.18 16 18 C -0.12 0.21 9.34 22.27 0.21 0.42 16 19 C -0.13 0.14 10.05 22.27 0.22 0.36 16 20 C -0.13 0.20 10.05 22.27 0.22 0.43 16 21 C -0.13 0.36 10.05 22.27 0.22 0.59 16 22 C -0.12 0.52 9.05 22.27 0.20 0.72 16 23 C -0.14 0.65 7.01 31.18 0.22 0.87 16 24 C 0.05 -0.19 5.32 31.18 0.17 -0.02 16 25 H 0.12 -0.76 7.61 -2.38 -0.02 -0.78 16 26 F -0.22 -0.86 17.42 44.97 0.78 -0.08 16 27 C -0.15 0.96 6.08 31.12 0.19 1.15 16 28 C -0.14 -0.69 9.55 22.37 0.21 -0.47 16 29 H 0.39 -0.75 8.70 -74.06 -0.64 -1.39 16 30 H 0.13 -0.13 7.96 -2.39 -0.02 -0.15 16 31 H -0.28 -0.49 7.11 99.48 0.71 0.21 16 32 H -0.30 -1.76 7.11 99.48 0.71 -1.05 16 33 H 0.15 -0.71 4.87 -2.91 -0.01 -0.73 16 34 H 0.15 -0.76 8.06 -2.91 -0.02 -0.78 16 35 H 0.14 0.16 6.30 -2.91 -0.02 0.14 16 36 H 0.07 0.14 7.62 -2.39 -0.02 0.12 16 37 H 0.07 0.13 7.62 -2.39 -0.02 0.11 16 38 H 0.13 -0.98 8.14 -2.39 -0.02 -1.00 16 39 H 0.12 -0.84 8.14 -2.39 -0.02 -0.86 16 40 H 0.41 -3.79 8.23 -92.71 -0.76 -4.55 16 41 H 0.07 -0.12 7.98 -2.38 -0.02 -0.14 16 42 H 0.08 -0.29 7.31 -2.39 -0.02 -0.31 16 43 H 0.13 -0.42 8.06 -2.91 -0.02 -0.44 16 44 H 0.13 -0.43 8.06 -2.91 -0.02 -0.45 16 45 H 0.13 -0.52 8.06 -2.91 -0.02 -0.55 16 46 H 0.14 -0.81 8.06 -2.91 -0.02 -0.83 16 47 H 0.14 -1.13 6.43 -2.91 -0.02 -1.15 16 48 H 0.10 -0.62 8.10 -2.39 -0.02 -0.63 16 49 H 0.10 -0.26 8.09 -2.39 -0.02 -0.28 16 50 H 0.10 -0.62 6.81 -2.39 -0.02 -0.63 16 51 H 0.10 -0.87 7.95 -2.39 -0.02 -0.89 16 52 H 0.13 0.68 8.06 -2.91 -0.02 0.65 16 Total: 0.00 -20.40 428.75 1.31 -19.09 By element: Atomic # 1 Polarization: -15.93 SS G_CDS: -0.41 Total: -16.34 kcal Atomic # 6 Polarization: 2.41 SS G_CDS: 4.18 Total: 6.59 kcal Atomic # 7 Polarization: 3.55 SS G_CDS: -2.40 Total: 1.15 kcal Atomic # 8 Polarization: -8.16 SS G_CDS: -2.89 Total: -11.04 kcal Atomic # 9 Polarization: -0.86 SS G_CDS: 0.78 Total: -0.08 kcal Atomic # 14 Polarization: -1.41 SS G_CDS: 2.04 Total: 0.63 kcal Total: -20.40 1.31 -19.09 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13458982_4549614.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -53.461 kcal (2) G-P(sol) polarization free energy of solvation -20.401 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -73.862 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.311 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.090 kcal (6) G-S(sol) free energy of system = (1) + (5) -72.551 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.26 seconds