Wall clock time and date at job start Sat Mar 6 2021 21:29:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42892 * 1 3 3 Si 1.86305 * 109.47159 * 2 1 4 4 C 1.50706 * 109.47193 * 240.00389 * 2 1 3 5 5 C 1.38243 * 119.94164 * 300.24804 * 4 2 1 6 6 C 1.38167 * 120.05335 * 180.21211 * 5 4 2 7 7 N 1.48008 * 120.02928 * 179.79883 * 6 5 4 8 8 O 1.21800 * 119.99663 * 359.71590 * 7 6 5 9 9 O 1.21799 * 120.00044 * 179.44802 * 7 6 5 10 10 C 1.38710 * 119.94440 * 359.51449 * 6 5 4 11 11 O 1.35899 * 120.05821 * 180.27804 * 10 6 5 12 12 C 1.42900 * 117.00088 * 180.02562 * 11 10 6 13 13 C 1.50706 * 109.46793 * 179.97438 * 12 11 10 14 14 O 1.21277 * 120.00051 * 359.97438 * 13 12 11 15 15 N 1.34781 * 119.99464 * 180.02562 * 13 12 11 16 16 C 1.46500 * 119.99721 * 180.02562 * 15 13 12 17 17 C 1.52994 * 109.47097 * 175.95668 * 16 15 13 18 18 C 1.50697 * 112.85460 * 65.11226 * 17 16 15 19 19 C 1.38239 * 119.99895 * 245.84456 * 18 17 16 20 20 C 1.38235 * 120.00047 * 179.73917 * 19 18 17 21 21 C 1.38238 * 119.99653 * 0.55532 * 20 19 18 22 22 C 1.38231 * 120.00034 * 359.69564 * 21 20 19 23 23 C 1.38230 * 120.00190 * 66.11236 * 18 17 16 24 24 C 1.53788 * 113.61307 * 293.91246 * 17 16 15 25 25 C 1.53786 * 87.08065 * 270.88576 * 24 17 16 26 26 H 1.09000 * 113.61042 * 89.11714 * 25 24 17 27 27 F 1.39897 * 113.61320 * 219.93330 * 25 24 17 28 28 C 1.53784 * 113.61282 * 196.31115 * 17 16 15 29 29 C 1.38756 * 119.88712 * 0.25608 * 10 6 5 30 30 C 1.38118 * 119.94712 * 359.97438 * 29 10 6 31 31 H 0.96703 * 114.00235 * 60.00187 * 1 2 3 32 32 H 1.09001 * 109.47801 * 120.00126 * 2 1 3 33 33 H 1.48497 * 109.99971 * 298.68477 * 3 2 1 34 34 H 1.48508 * 109.99423 * 59.99969 * 3 2 1 35 35 H 1.07995 * 119.97461 * 359.97438 * 5 4 2 36 36 H 1.08995 * 109.47001 * 299.99604 * 12 11 10 37 37 H 1.08993 * 109.47058 * 60.00132 * 12 11 10 38 38 H 0.96999 * 120.00004 * 359.97438 * 15 13 12 39 39 H 1.09005 * 109.47011 * 295.95439 * 16 15 13 40 40 H 1.08998 * 109.47497 * 55.94744 * 16 15 13 41 41 H 1.08005 * 119.99883 * 359.97438 * 19 18 17 42 42 H 1.08000 * 120.00242 * 180.27206 * 20 19 18 43 43 H 1.07999 * 119.99930 * 179.72389 * 21 20 19 44 44 H 1.07999 * 120.00011 * 180.02562 * 22 21 20 45 45 H 1.08000 * 119.99827 * 0.02562 * 23 18 17 46 46 H 1.08995 * 113.61198 * 25.43167 * 24 17 16 47 47 H 1.08999 * 113.61343 * 156.33836 * 24 17 16 48 48 H 1.09008 * 113.61084 * 203.66301 * 28 17 16 49 49 H 1.09000 * 113.61634 * 334.55968 * 28 17 16 50 50 H 1.08001 * 120.02737 * 180.02562 * 29 10 6 51 51 H 1.08001 * 119.97915 * 180.02562 * 30 29 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 1.5924 -2.0324 -1.4508 6 6 2.0553 -2.6871 -2.5760 7 7 1.6957 -4.1039 -2.8090 8 8 0.9957 -4.6945 -2.0060 9 8 2.0958 -4.6776 -3.8061 10 6 2.8524 -2.0140 -3.4900 11 8 3.3043 -2.6541 -4.6004 12 6 4.1208 -1.8988 -5.4975 13 6 4.5249 -2.7674 -6.6609 14 8 4.1509 -3.9197 -6.7160 15 7 5.3028 -2.2637 -7.6396 16 6 5.6952 -3.1078 -8.7708 17 6 6.4852 -2.2727 -9.7804 18 6 7.7992 -1.7799 -9.2314 19 6 8.0049 -0.4261 -9.0416 20 6 9.2083 0.0256 -8.5330 21 6 10.2102 -0.8756 -8.2250 22 6 10.0065 -2.2289 -8.4197 23 6 8.8010 -2.6810 -8.9229 24 6 5.6499 -1.1739 -10.4586 25 6 5.2867 -2.2189 -11.5268 26 1 4.3962 -2.7991 -11.2848 27 9 5.2637 -1.7055 -12.8279 28 6 6.6041 -2.9307 -11.1652 29 6 3.1872 -0.6857 -3.2690 30 6 2.7259 -0.0369 -2.1403 31 1 -0.3934 0.4417 -0.7651 32 1 1.7924 -0.5138 0.8899 33 1 1.5878 2.4586 -1.2242 34 1 1.5613 2.4678 1.2086 35 1 0.9684 -2.5549 -0.7409 36 1 3.5595 -1.0391 -5.8633 37 1 5.0129 -1.5546 -4.9745 38 1 5.6022 -1.3422 -7.5952 39 1 6.3166 -3.9289 -8.4132 40 1 4.8031 -3.5100 -9.2508 41 1 7.2239 0.2784 -9.2872 42 1 9.3673 1.0829 -8.3806 43 1 11.1520 -0.5224 -7.8318 44 1 10.7891 -2.9330 -8.1786 45 1 8.6420 -3.7383 -9.0756 46 1 4.7984 -0.8432 -9.8640 47 1 6.2464 -0.3463 -10.8424 48 1 7.4610 -2.5825 -11.7420 49 1 6.5224 -4.0174 -11.1408 50 1 3.8073 -0.1592 -3.9794 51 1 2.9858 0.9970 -1.9680 There are 76 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 76 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13458982_4549638.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:29:39 Heat of formation + Delta-G solvation = -59.487492 kcal Electronic energy + Delta-G solvation = -39697.438941 eV Core-core repulsion = 34255.072155 eV Total energy + Delta-G solvation = -5442.366786 eV No. of doubly occupied orbitals = 76 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 417.151 amu Computer time = 1.62 seconds Orbital eigenvalues (eV) -48.57544 -43.28892 -41.87037 -41.49027 -40.44908 -39.40583 -38.70081 -37.61846 -37.47040 -35.42648 -33.48851 -32.28594 -32.03402 -31.81967 -30.54733 -28.02451 -27.81446 -27.06789 -26.48814 -25.00019 -23.99638 -23.19500 -22.82460 -22.49242 -21.71404 -20.53517 -20.03440 -19.76910 -19.17044 -18.63572 -18.55286 -18.30744 -18.13233 -17.60110 -17.45016 -17.22389 -16.80114 -16.52286 -16.38320 -16.18634 -16.02643 -15.86324 -15.69984 -15.50817 -15.46104 -15.08530 -14.81837 -14.61650 -14.52526 -14.25235 -14.01639 -13.87039 -13.68773 -13.61179 -13.50387 -13.33054 -13.21796 -12.70038 -12.49476 -12.43298 -12.38389 -12.36025 -12.26979 -12.20493 -12.17521 -11.81376 -11.76751 -11.32428 -11.25383 -11.05624 -10.83583 -10.75287 -10.22627 -9.79819 -9.79298 -9.62404 -4.91450 -1.30836 -0.24055 0.16203 0.35880 0.43175 0.52308 1.18936 1.26925 1.45541 1.60911 2.02421 2.05314 2.27971 2.84554 3.11119 3.13956 3.19804 3.28239 3.35698 3.44218 3.44879 3.53508 3.62888 3.67947 3.71881 3.77039 3.87682 3.92767 4.00373 4.13969 4.15722 4.22262 4.29675 4.33008 4.39718 4.49799 4.56017 4.63047 4.64316 4.65717 4.68726 4.71867 4.73624 4.84425 4.87132 4.96706 5.07865 5.12110 5.17828 5.19282 5.26339 5.28339 5.61276 5.66828 5.68152 5.75306 6.12533 6.40001 6.42513 6.45210 7.11555 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.551 6.551 2 C -0.091 4.091 3 Si 0.789 3.211 4 C -0.147 4.147 5 C -0.004 4.004 6 C -0.104 4.104 7 N 0.034 4.966 8 O -0.204 6.204 9 O -0.172 6.172 10 C 0.194 3.806 11 O -0.291 6.291 12 C 0.024 3.976 13 C 0.510 3.490 14 O -0.563 6.563 15 N -0.703 5.703 16 C 0.148 3.852 17 C -0.039 4.039 18 C -0.072 4.072 19 C -0.118 4.118 20 C -0.122 4.122 21 C -0.132 4.132 22 C -0.131 4.131 23 C -0.123 4.123 24 C -0.142 4.142 25 C 0.052 3.948 26 H 0.120 0.880 27 F -0.224 7.224 28 C -0.142 4.142 29 C -0.189 4.189 30 C -0.004 4.004 31 H 0.389 0.611 32 H 0.127 0.873 33 H -0.260 1.260 34 H -0.310 1.310 35 H 0.150 0.850 36 H 0.145 0.855 37 H 0.143 0.857 38 H 0.419 0.581 39 H 0.065 0.935 40 H 0.075 0.925 41 H 0.146 0.854 42 H 0.140 0.860 43 H 0.130 0.870 44 H 0.125 0.875 45 H 0.120 0.880 46 H 0.102 0.898 47 H 0.108 0.892 48 H 0.097 0.903 49 H 0.091 0.909 50 H 0.206 0.794 51 H 0.189 0.811 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.747 13.915 -0.248 15.928 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.359 6.359 2 C -0.198 4.198 3 Si 0.692 3.308 4 C -0.149 4.149 5 C -0.023 4.023 6 C -0.190 4.190 7 N 0.544 4.456 8 O -0.411 6.411 9 O -0.387 6.387 10 C 0.144 3.856 11 O -0.201 6.201 12 C -0.053 4.053 13 C 0.296 3.704 14 O -0.440 6.440 15 N -0.358 5.358 16 C 0.025 3.975 17 C -0.039 4.039 18 C -0.072 4.072 19 C -0.136 4.136 20 C -0.140 4.140 21 C -0.150 4.150 22 C -0.149 4.149 23 C -0.141 4.141 24 C -0.180 4.180 25 C 0.016 3.984 26 H 0.138 0.862 27 F -0.205 7.205 28 C -0.180 4.180 29 C -0.207 4.207 30 C -0.021 4.021 31 H 0.239 0.761 32 H 0.145 0.855 33 H -0.186 1.186 34 H -0.238 1.238 35 H 0.168 0.832 36 H 0.162 0.838 37 H 0.160 0.840 38 H 0.257 0.743 39 H 0.084 0.916 40 H 0.093 0.907 41 H 0.164 0.836 42 H 0.158 0.842 43 H 0.148 0.852 44 H 0.143 0.857 45 H 0.138 0.862 46 H 0.120 0.880 47 H 0.126 0.874 48 H 0.115 0.885 49 H 0.110 0.890 50 H 0.223 0.777 51 H 0.205 0.795 Dipole moment (debyes) X Y Z Total from point charges 7.479 14.010 0.248 15.883 hybrid contribution -1.138 -1.092 -0.574 1.679 sum 6.341 12.918 -0.326 14.394 Atomic orbital electron populations 1.86632 1.18504 1.80457 1.50336 1.25518 0.83602 1.13087 0.97567 0.94182 0.89274 0.69924 0.77458 1.20380 1.02090 0.92610 0.99811 1.20838 0.94176 0.94773 0.92482 1.20862 1.13425 0.81501 1.03193 1.43902 0.98216 1.03993 0.99460 1.94506 1.36055 1.68299 1.42279 1.94675 1.56501 1.69459 1.18016 1.18966 0.89629 0.92053 0.84915 1.86469 1.63617 1.39753 1.30232 1.23111 0.98147 0.94541 0.89485 1.20427 0.78521 0.87652 0.83844 1.90859 1.55129 1.20040 1.77996 1.45488 1.51550 1.16805 1.21964 1.21086 0.98443 0.92483 0.85518 1.20530 0.92847 0.97225 0.93314 1.19444 0.94101 0.93826 0.99823 1.21313 0.98274 0.94738 0.99243 1.21443 0.93412 1.00610 0.98510 1.21456 1.00060 0.93445 1.00029 1.21359 0.97605 0.96469 0.99470 1.21116 0.93642 0.99920 0.99423 1.23754 1.00818 0.97056 0.96331 1.23432 1.00279 0.97403 0.77298 0.86236 1.92786 1.97873 1.88536 1.41305 1.23693 0.97872 1.01942 0.94466 1.21808 1.06111 0.90444 1.02355 1.21713 0.89376 1.01270 0.89769 0.76144 0.85547 1.18568 1.23839 0.83239 0.83768 0.83976 0.74322 0.91643 0.90722 0.83638 0.84226 0.85192 0.85659 0.86167 0.87957 0.87391 0.88491 0.89012 0.77706 0.79455 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.00 12.76 -148.98 -1.90 -0.90 16 2 C -0.09 0.62 2.82 71.24 0.20 0.82 16 3 Si 0.79 -8.34 29.78 68.60 2.04 -6.30 16 4 C -0.15 0.95 5.39 -19.85 -0.11 0.84 16 5 C 0.00 0.00 9.11 22.25 0.20 0.20 16 6 C -0.10 -0.66 6.87 36.47 0.25 -0.41 16 7 N 0.03 0.56 4.45 -46.24 -0.21 0.35 16 8 O -0.20 -3.75 18.45 18.89 0.35 -3.40 16 9 O -0.17 -3.62 17.24 25.61 0.44 -3.18 16 10 C 0.19 -0.07 6.67 22.51 0.15 0.08 16 11 O -0.29 -0.99 7.68 -63.39 -0.49 -1.47 16 12 C 0.02 -0.20 5.22 71.24 0.37 0.17 16 13 C 0.51 -0.27 7.91 87.66 0.69 0.42 16 14 O -0.56 -7.33 16.50 16.02 0.26 -7.06 16 15 N -0.70 5.27 5.19 -463.06 -2.40 2.87 16 16 C 0.15 -0.70 4.84 86.38 0.42 -0.29 16 17 C -0.04 0.29 0.63 -52.40 -0.03 0.26 16 18 C -0.07 0.43 4.51 -19.87 -0.09 0.34 16 19 C -0.12 0.94 9.05 22.27 0.20 1.14 16 20 C -0.12 0.80 10.05 22.27 0.22 1.02 16 21 C -0.13 0.54 10.05 22.27 0.22 0.77 16 22 C -0.13 0.35 10.05 22.27 0.22 0.57 16 23 C -0.12 0.38 9.34 22.27 0.21 0.58 16 24 C -0.14 1.26 6.10 31.12 0.19 1.45 16 25 C 0.05 -0.22 5.32 31.21 0.17 -0.05 16 26 H 0.12 -0.72 7.61 -2.39 -0.02 -0.74 16 27 F -0.22 -0.69 17.41 44.97 0.78 0.09 16 28 C -0.14 0.73 7.02 31.21 0.22 0.95 16 29 C -0.19 2.21 9.04 22.37 0.20 2.42 16 30 C 0.00 0.05 8.66 22.25 0.19 0.24 16 31 H 0.39 -3.19 8.70 -74.06 -0.64 -3.83 16 32 H 0.13 -0.92 7.96 -2.39 -0.02 -0.94 16 33 H -0.26 2.48 7.11 99.48 0.71 3.18 16 34 H -0.31 0.11 7.11 99.48 0.71 0.81 16 35 H 0.15 0.50 7.61 -2.91 -0.02 0.48 16 36 H 0.14 -2.50 7.66 -2.39 -0.02 -2.52 16 37 H 0.14 -2.37 7.66 -2.39 -0.02 -2.38 16 38 H 0.42 -6.00 8.23 -92.71 -0.76 -6.76 16 39 H 0.07 -0.09 7.97 -2.38 -0.02 -0.11 16 40 H 0.07 -0.22 7.31 -2.39 -0.02 -0.24 16 41 H 0.15 -1.84 6.41 -2.91 -0.02 -1.86 16 42 H 0.14 -1.42 8.06 -2.91 -0.02 -1.44 16 43 H 0.13 -0.84 8.06 -2.91 -0.02 -0.86 16 44 H 0.13 -0.52 8.06 -2.91 -0.02 -0.54 16 45 H 0.12 -0.42 8.06 -2.91 -0.02 -0.45 16 46 H 0.10 -1.23 7.95 -2.39 -0.02 -1.25 16 47 H 0.11 -0.97 6.79 -2.39 -0.02 -0.99 16 48 H 0.10 -0.33 8.09 -2.38 -0.02 -0.35 16 49 H 0.09 -0.53 8.10 -2.39 -0.02 -0.55 16 50 H 0.21 -4.47 6.30 -2.91 -0.02 -4.49 16 51 H 0.19 -3.77 4.87 -2.91 -0.01 -3.78 16 Total: 0.00 -39.74 433.78 2.65 -37.09 By element: Atomic # 1 Polarization: -29.27 SS G_CDS: -0.34 Total: -29.61 kcal Atomic # 6 Polarization: 7.41 SS G_CDS: 4.11 Total: 11.52 kcal Atomic # 7 Polarization: 5.83 SS G_CDS: -2.61 Total: 3.22 kcal Atomic # 8 Polarization: -14.68 SS G_CDS: -1.33 Total: -16.01 kcal Atomic # 9 Polarization: -0.69 SS G_CDS: 0.78 Total: 0.09 kcal Atomic # 14 Polarization: -8.34 SS G_CDS: 2.04 Total: -6.30 kcal Total: -39.74 2.65 -37.09 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13458982_4549638.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -22.393 kcal (2) G-P(sol) polarization free energy of solvation -39.740 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -62.133 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.646 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.094 kcal (6) G-S(sol) free energy of system = (1) + (5) -59.487 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.62 seconds