Wall clock time and date at job start Sat Mar 6 2021 21:29:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42907 * 1 3 3 Si 1.86303 * 109.47040 * 2 1 4 4 C 1.50707 * 109.47008 * 240.00284 * 2 1 3 5 5 C 1.38242 * 119.97030 * 120.02050 * 4 2 1 6 6 C 1.38289 * 120.10428 * 179.97438 * 5 4 2 7 7 C 1.38116 * 120.06040 * 359.76855 * 6 5 4 8 8 C 1.38752 * 119.94301 * 0.51018 * 7 6 5 9 9 O 1.35900 * 120.05722 * 179.74845 * 8 7 6 10 10 C 1.42908 * 117.00004 * 359.71685 * 9 8 7 11 11 C 1.50700 * 109.47000 * 180.02562 * 10 9 8 12 12 O 1.21280 * 120.00243 * 0.02562 * 11 10 9 13 13 N 1.34779 * 119.99682 * 180.02562 * 11 10 9 14 14 C 1.46494 * 119.99955 * 180.02562 * 13 11 10 15 15 C 1.52998 * 109.47329 * 184.95513 * 14 13 11 16 16 C 1.50697 * 112.85263 * 59.66166 * 15 14 13 17 17 C 1.38239 * 120.00136 * 257.14023 * 16 15 14 18 18 C 1.38227 * 120.00177 * 179.97438 * 17 16 15 19 19 C 1.38237 * 120.00282 * 0.02562 * 18 17 16 20 20 C 1.38237 * 119.99661 * 0.25761 * 19 18 17 21 21 C 1.38232 * 119.99952 * 77.11274 * 16 15 14 22 22 C 1.53784 * 113.68869 * 288.39338 * 15 14 13 23 23 C 1.53782 * 87.08387 * 270.87138 * 22 15 14 24 24 H 1.08996 * 113.61318 * 89.11104 * 23 22 15 25 25 F 1.39898 * 113.61488 * 220.01906 * 23 22 15 26 26 C 1.53783 * 113.61592 * 190.85825 * 15 14 13 27 27 C 1.38167 * 119.97147 * 299.99784 * 4 2 1 28 28 H 0.96695 * 113.99934 * 59.99968 * 1 2 3 29 29 H 1.08998 * 109.47077 * 120.00122 * 2 1 3 30 30 H 1.48497 * 109.99823 * 59.99973 * 3 2 1 31 31 H 1.48497 * 109.99648 * 181.32028 * 3 2 1 32 32 H 1.07994 * 119.94494 * 359.97438 * 5 4 2 33 33 H 1.08007 * 119.96864 * 180.02562 * 6 5 4 34 34 H 1.08003 * 120.03027 * 180.27815 * 7 6 5 35 35 H 1.09002 * 109.46542 * 60.00730 * 10 9 8 36 36 H 1.08998 * 109.47148 * 300.00595 * 10 9 8 37 37 H 0.96996 * 120.00182 * 359.97438 * 13 11 10 38 38 H 1.09000 * 109.47403 * 64.95499 * 14 13 11 39 39 H 1.09002 * 109.47160 * 304.95268 * 14 13 11 40 40 H 1.08002 * 119.99626 * 359.97438 * 17 16 15 41 41 H 1.08001 * 120.00475 * 180.02562 * 18 17 16 42 42 H 1.07993 * 120.00536 * 179.97438 * 19 18 17 43 43 H 1.07999 * 120.00096 * 179.72174 * 20 19 18 44 44 H 1.07997 * 120.00103 * 0.02562 * 21 16 15 45 45 H 1.09000 * 113.61385 * 25.42037 * 22 15 14 46 46 H 1.09000 * 113.61109 * 156.31964 * 22 15 14 47 47 H 1.08998 * 113.61365 * 203.74396 * 26 15 14 48 48 H 1.08992 * 113.61461 * 334.65451 * 26 15 14 49 49 H 1.08004 * 120.02538 * 0.04514 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2306 5 6 2.7265 -0.0380 -2.1399 6 6 3.1894 -0.6873 -3.2697 7 6 2.8622 -2.0110 -3.4899 8 6 2.0596 -2.6863 -2.5816 9 8 1.7320 -3.9873 -2.7985 10 6 2.2439 -4.5959 -3.9859 11 6 1.7796 -6.0279 -4.0566 12 8 1.0789 -6.4824 -3.1771 13 7 2.1430 -6.8035 -5.0972 14 6 1.6913 -8.1953 -5.1663 15 6 2.3389 -8.8826 -6.3700 16 6 3.8444 -8.8839 -6.3032 17 6 4.5712 -7.9949 -7.0730 18 6 5.9521 -7.9957 -7.0112 19 6 6.6064 -8.8858 -6.1802 20 6 5.8798 -9.7787 -5.4148 21 6 4.4986 -9.7735 -5.4717 22 6 1.7828 -8.4107 -7.7240 23 6 0.7286 -9.5222 -7.5894 24 1 -0.1740 -9.2068 -7.0660 25 9 0.4577 -10.1860 -8.7907 26 6 1.7354 -10.2601 -6.6912 27 6 1.5973 -2.0332 -1.4487 28 1 -0.3933 0.4417 -0.7650 29 1 1.7924 -0.5138 0.8900 30 1 1.5615 2.4679 1.2085 31 1 3.5346 1.7702 -0.0322 32 1 2.9865 0.9959 -1.9676 33 1 3.8108 -0.1601 -3.9785 34 1 3.2277 -2.5189 -4.3701 35 1 3.3334 -4.5673 -3.9680 36 1 1.8803 -4.0529 -4.8583 37 1 2.7031 -6.4399 -5.8008 38 1 0.6068 -8.2205 -5.2736 39 1 1.9782 -8.7162 -4.2528 40 1 4.0601 -7.2998 -7.7226 41 1 6.5200 -7.3010 -7.6123 42 1 7.6853 -8.8867 -6.1322 43 1 6.3911 -10.4771 -4.7689 44 1 3.9308 -10.4680 -4.8703 45 1 1.3630 -7.4052 -7.6970 46 1 2.4718 -8.5607 -8.5551 47 1 2.4114 -10.9157 -7.2401 48 1 1.2774 -10.7475 -5.8307 49 1 0.9758 -2.5578 -0.7381 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13458982_4860298.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:29:54 Heat of formation + Delta-G solvation = -67.679712 kcal Electronic energy + Delta-G solvation = -32811.737829 eV Core-core repulsion = 28200.032237 eV Total energy + Delta-G solvation = -4611.705592 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 372.157 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -48.59095 -41.87313 -41.39113 -40.32584 -39.08129 -38.75270 -37.22382 -35.45048 -32.50694 -32.22715 -32.02415 -31.78742 -30.10736 -27.95459 -27.27277 -26.74254 -25.08132 -23.70082 -23.40388 -22.73415 -22.55739 -21.56819 -20.16673 -19.35470 -18.67982 -18.31281 -17.78214 -17.56919 -17.48441 -17.30608 -17.00521 -16.71466 -16.60017 -16.19969 -16.11151 -15.79169 -15.70755 -15.57424 -15.37257 -15.02791 -14.87424 -14.60691 -14.50475 -14.44157 -14.17271 -13.97225 -13.82568 -13.71501 -13.61905 -13.36058 -12.98263 -12.68897 -12.59555 -12.56133 -12.35735 -12.19857 -11.98893 -11.95596 -11.67920 -11.50215 -11.44190 -10.97087 -10.50447 -10.29109 -9.98012 -9.94331 -9.80663 -9.29875 -5.04029 0.16992 0.25579 0.33539 0.37132 1.24065 1.39016 1.43798 1.62923 1.96594 2.45727 2.64100 2.67120 2.94150 3.05128 3.24081 3.32426 3.42006 3.46097 3.49811 3.61112 3.70243 3.72739 3.83587 3.84675 3.91701 3.94002 3.97941 4.02120 4.10986 4.15697 4.33720 4.34764 4.41171 4.45379 4.47731 4.51684 4.51954 4.54182 4.58132 4.63969 4.76380 4.92255 4.93891 4.96454 5.09349 5.14589 5.20472 5.31871 5.40713 5.41470 5.46972 5.49462 5.61315 5.92106 6.16915 6.32392 6.57610 7.01392 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.538 6.538 2 C -0.071 4.071 3 Si 0.694 3.306 4 C -0.079 4.079 5 C -0.154 4.154 6 C -0.072 4.072 7 C -0.206 4.206 8 C 0.129 3.871 9 O -0.288 6.288 10 C 0.041 3.959 11 C 0.517 3.483 12 O -0.510 6.510 13 N -0.723 5.723 14 C 0.148 3.852 15 C -0.056 4.056 16 C -0.068 4.068 17 C -0.120 4.120 18 C -0.116 4.116 19 C -0.120 4.120 20 C -0.114 4.114 21 C -0.109 4.109 22 C -0.152 4.152 23 C 0.065 3.935 24 H 0.112 0.888 25 F -0.203 7.203 26 C -0.141 4.141 27 C -0.121 4.121 28 H 0.380 0.620 29 H 0.116 0.884 30 H -0.255 1.255 31 H -0.258 1.258 32 H 0.129 0.871 33 H 0.131 0.869 34 H 0.129 0.871 35 H 0.094 0.906 36 H 0.095 0.905 37 H 0.402 0.598 38 H 0.077 0.923 39 H 0.081 0.919 40 H 0.122 0.878 41 H 0.124 0.876 42 H 0.122 0.878 43 H 0.123 0.877 44 H 0.122 0.878 45 H 0.085 0.915 46 H 0.103 0.897 47 H 0.104 0.896 48 H 0.088 0.912 49 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.479 2.495 -5.537 7.000 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.343 6.343 2 C -0.182 4.182 3 Si 0.596 3.404 4 C -0.080 4.080 5 C -0.172 4.172 6 C -0.091 4.091 7 C -0.225 4.225 8 C 0.084 3.916 9 O -0.200 6.200 10 C -0.038 4.038 11 C 0.301 3.699 12 O -0.384 6.384 13 N -0.378 5.378 14 C 0.025 3.975 15 C -0.056 4.056 16 C -0.068 4.068 17 C -0.138 4.138 18 C -0.134 4.134 19 C -0.138 4.138 20 C -0.132 4.132 21 C -0.127 4.127 22 C -0.189 4.189 23 C 0.029 3.971 24 H 0.130 0.870 25 F -0.184 7.184 26 C -0.179 4.179 27 C -0.139 4.139 28 H 0.227 0.773 29 H 0.133 0.867 30 H -0.180 1.180 31 H -0.183 1.183 32 H 0.147 0.853 33 H 0.149 0.851 34 H 0.147 0.853 35 H 0.112 0.888 36 H 0.113 0.887 37 H 0.237 0.763 38 H 0.096 0.904 39 H 0.100 0.900 40 H 0.140 0.860 41 H 0.142 0.858 42 H 0.141 0.859 43 H 0.142 0.858 44 H 0.140 0.860 45 H 0.103 0.897 46 H 0.122 0.878 47 H 0.122 0.878 48 H 0.107 0.893 49 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 3.391 2.291 -3.798 5.583 hybrid contribution 0.713 -0.560 -0.561 1.066 sum 4.104 1.730 -4.359 6.232 Atomic orbital electron populations 1.86524 1.16861 1.81710 1.49212 1.25138 0.85442 1.10260 0.97311 0.94640 0.80878 0.77742 0.87121 1.20164 0.97404 0.93807 0.96622 1.20948 1.00852 0.99897 0.95509 1.20906 0.97807 0.93637 0.96702 1.21291 1.03530 0.96637 1.01051 1.19039 0.94813 0.82983 0.94771 1.86174 1.70358 1.22585 1.40900 1.22441 1.00242 0.92168 0.88913 1.19992 0.80857 0.87016 0.82004 1.90799 1.35892 1.74171 1.37532 1.45670 1.54498 1.12394 1.25210 1.21147 0.98601 0.80638 0.97114 1.20775 0.91999 0.97871 0.95001 1.19384 0.93064 0.96817 0.97538 1.21011 0.94113 0.99073 0.99577 1.21174 0.94390 0.99018 0.98788 1.21240 1.00209 0.95756 0.96568 1.21210 0.94050 0.98821 0.99162 1.20994 0.94521 0.98717 0.98464 1.23775 0.98248 0.99670 0.97254 1.23092 0.98066 0.93369 0.82563 0.86988 1.92833 1.95528 1.82071 1.47957 1.23661 0.98005 0.95671 1.00546 1.20273 1.02818 0.93923 0.96931 0.77311 0.86672 1.17961 1.18280 0.85338 0.85082 0.85268 0.88787 0.88713 0.76298 0.90447 0.90026 0.85977 0.85847 0.85948 0.85850 0.85971 0.89658 0.87835 0.87781 0.89295 0.84583 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.45 12.77 -35.23 -0.45 -0.90 16 2 C -0.07 -0.02 2.82 36.01 0.10 0.08 16 3 Si 0.69 -0.71 29.79 -169.99 -5.06 -5.77 16 4 C -0.08 -0.06 5.39 -104.64 -0.56 -0.62 16 5 C -0.15 0.08 8.67 -39.56 -0.34 -0.26 16 6 C -0.07 0.07 10.04 -39.61 -0.40 -0.32 16 7 C -0.21 0.09 9.04 -39.44 -0.36 -0.26 16 8 C 0.13 0.25 6.69 -39.22 -0.26 -0.02 16 9 O -0.29 -0.86 9.67 -39.33 -0.38 -1.24 16 10 C 0.04 -0.04 5.22 36.01 0.19 0.15 16 11 C 0.52 0.58 7.91 -10.98 -0.09 0.49 16 12 O -0.51 -3.11 16.50 -14.35 -0.24 -3.34 16 13 N -0.72 1.45 5.31 -60.30 -0.32 1.13 16 14 C 0.15 -0.27 4.93 -4.05 -0.02 -0.29 16 15 C -0.06 0.16 0.63 -154.85 -0.10 0.06 16 16 C -0.07 0.13 4.42 -104.62 -0.46 -0.34 16 17 C -0.12 0.27 8.44 -39.58 -0.33 -0.06 16 18 C -0.12 0.19 10.05 -39.59 -0.40 -0.21 16 19 C -0.12 0.12 10.05 -39.58 -0.40 -0.28 16 20 C -0.11 0.09 10.05 -39.58 -0.40 -0.31 16 21 C -0.11 0.11 9.39 -39.58 -0.37 -0.26 16 22 C -0.15 0.48 6.08 -25.92 -0.16 0.32 16 23 C 0.07 -0.12 5.32 -25.91 -0.14 -0.26 16 24 H 0.11 -0.35 7.60 -51.93 -0.39 -0.74 16 25 F -0.20 -0.33 17.41 2.25 0.04 -0.29 16 26 C -0.14 0.35 6.77 -25.91 -0.18 0.17 16 27 C -0.12 -0.28 9.55 -39.44 -0.38 -0.66 16 28 H 0.38 -1.19 8.70 45.56 0.40 -0.80 16 29 H 0.12 0.09 7.96 -51.93 -0.41 -0.32 16 30 H -0.25 -0.58 7.11 56.52 0.40 -0.18 16 31 H -0.26 -0.30 7.11 56.52 0.40 0.10 16 32 H 0.13 -0.31 4.87 -52.49 -0.26 -0.56 16 33 H 0.13 -0.44 8.06 -52.48 -0.42 -0.86 16 34 H 0.13 -0.40 6.30 -52.48 -0.33 -0.73 16 35 H 0.09 -0.30 7.65 -51.93 -0.40 -0.69 16 36 H 0.10 -0.35 7.67 -51.93 -0.40 -0.75 16 37 H 0.40 -1.76 7.70 -40.82 -0.31 -2.07 16 38 H 0.08 -0.14 7.30 -51.93 -0.38 -0.52 16 39 H 0.08 -0.04 8.14 -51.93 -0.42 -0.46 16 40 H 0.12 -0.50 7.03 -52.49 -0.37 -0.87 16 41 H 0.12 -0.39 8.06 -52.49 -0.42 -0.81 16 42 H 0.12 -0.28 8.06 -52.49 -0.42 -0.70 16 43 H 0.12 -0.24 8.06 -52.49 -0.42 -0.66 16 44 H 0.12 -0.23 8.03 -52.49 -0.42 -0.65 16 45 H 0.08 -0.35 8.10 -51.93 -0.42 -0.77 16 46 H 0.10 -0.28 7.44 -51.93 -0.39 -0.67 16 47 H 0.10 -0.18 8.09 -51.93 -0.42 -0.60 16 48 H 0.09 -0.29 8.10 -51.93 -0.42 -0.71 16 49 H 0.14 0.42 8.06 -52.48 -0.42 -0.01 16 LS Contribution 408.04 15.07 6.15 6.15 Total: 0.00 -10.20 408.04 -11.97 -22.17 By element: Atomic # 1 Polarization: -8.38 SS G_CDS: -6.66 Total: -15.04 kcal Atomic # 6 Polarization: 2.18 SS G_CDS: -5.05 Total: -2.87 kcal Atomic # 7 Polarization: 1.45 SS G_CDS: -0.32 Total: 1.13 kcal Atomic # 8 Polarization: -4.42 SS G_CDS: -1.07 Total: -5.49 kcal Atomic # 9 Polarization: -0.33 SS G_CDS: 0.04 Total: -0.29 kcal Atomic # 14 Polarization: -0.71 SS G_CDS: -5.06 Total: -5.77 kcal Total LS contribution 6.15 Total: 6.15 kcal Total: -10.20 -11.97 -22.17 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13458982_4860298.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -45.508 kcal (2) G-P(sol) polarization free energy of solvation -10.205 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -55.712 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.968 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.172 kcal (6) G-S(sol) free energy of system = (1) + (5) -67.680 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds