Wall clock time and date at job start Sat Mar 6 2021 21:29:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35981 * 117.00149 * 2 1 4 4 C 1.38677 * 120.00061 * 180.02562 * 3 2 1 5 5 C 1.38151 * 120.00018 * 180.02562 * 4 3 2 6 6 C 1.50700 * 120.00342 * 179.97438 * 5 4 3 7 7 O 1.42901 * 109.46873 * 105.02267 * 6 5 4 8 8 Si 1.86300 * 109.47015 * 345.02977 * 6 5 4 9 9 C 1.38681 * 120.00153 * 0.02562 * 5 4 3 10 10 O 1.35974 * 120.00353 * 179.97438 * 9 5 4 11 11 C 1.42898 * 117.00141 * 179.97438 * 10 9 5 12 12 C 1.50704 * 109.47242 * 180.02562 * 11 10 9 13 13 O 1.21276 * 119.99917 * 0.02562 * 12 11 10 14 14 N 1.34776 * 120.00278 * 179.97438 * 12 11 10 15 15 C 1.46497 * 120.00400 * 179.97438 * 14 12 11 16 16 C 1.52995 * 109.47023 * 179.03380 * 15 14 12 17 17 C 1.50694 * 112.84961 * 66.14588 * 16 15 14 18 18 C 1.38237 * 119.99770 * 245.82951 * 17 16 15 19 19 C 1.38233 * 120.00035 * 179.74442 * 18 17 16 20 20 C 1.38231 * 120.00196 * 0.55080 * 19 18 17 21 21 C 1.38235 * 119.99722 * 359.70014 * 20 19 18 22 22 C 1.38237 * 120.00355 * 0.02562 * 21 20 19 23 23 C 1.53777 * 113.61848 * 294.94101 * 16 15 14 24 24 C 1.53782 * 87.08451 * 270.88872 * 23 16 15 25 25 H 1.09003 * 113.61594 * 89.19659 * 24 23 16 26 26 F 1.39896 * 113.61561 * 220.01914 * 24 23 16 27 27 C 1.53782 * 87.07998 * 334.56743 * 24 23 16 28 28 C 1.38719 * 119.99430 * 0.27260 * 9 5 4 29 29 C 1.38114 * 120.00443 * 359.45007 * 28 9 5 30 30 H 1.09000 * 109.46655 * 180.02562 * 1 2 3 31 31 H 1.08999 * 109.46898 * 299.99822 * 1 2 3 32 32 H 1.08990 * 109.47261 * 59.99926 * 1 2 3 33 33 H 1.07993 * 120.00090 * 0.04418 * 4 3 2 34 34 H 1.08998 * 109.47621 * 225.02276 * 6 5 4 35 35 H 0.96702 * 114.00112 * 60.00454 * 7 6 5 36 36 H 1.48495 * 110.00133 * 178.67572 * 8 6 5 37 37 H 1.48501 * 109.99882 * 299.99641 * 8 6 5 38 38 H 1.08995 * 109.47349 * 60.00126 * 11 10 9 39 39 H 1.09000 * 109.47162 * 299.99716 * 11 10 9 40 40 H 0.97008 * 119.99756 * 0.02562 * 14 12 11 41 41 H 1.08996 * 109.46947 * 299.03819 * 15 14 12 42 42 H 1.09002 * 109.46789 * 59.03417 * 15 14 12 43 43 H 1.08005 * 119.99730 * 359.97438 * 18 17 16 44 44 H 1.08004 * 120.00286 * 180.26966 * 19 18 17 45 45 H 1.08003 * 120.00320 * 179.72622 * 20 19 18 46 46 H 1.08001 * 120.00091 * 180.02562 * 21 20 19 47 47 H 1.07995 * 120.00816 * 179.97438 * 22 21 20 48 48 H 1.09007 * 113.61001 * 25.43582 * 23 16 15 49 49 H 1.08998 * 113.61748 * 156.25680 * 23 16 15 50 50 H 1.09009 * 113.61304 * 270.88452 * 27 24 23 51 51 H 1.09001 * 113.61630 * 139.98715 * 27 24 23 52 52 H 1.08006 * 119.99590 * 179.70709 * 28 9 5 53 53 H 1.07993 * 120.00259 * 180.25475 * 29 28 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2116 0.0000 4 6 3.4313 1.2841 -0.0005 5 6 4.0585 2.5151 0.0000 6 6 5.5634 2.5940 0.0000 7 8 6.0207 2.9683 -1.3011 8 14 6.2724 0.9318 0.4530 9 6 3.3032 3.6782 0.0016 10 8 3.9205 4.8897 0.0027 11 6 3.0806 6.0458 0.0037 12 6 3.9348 7.2874 0.0042 13 8 5.1438 7.1916 0.0031 14 7 3.3552 8.5042 0.0046 15 6 4.1856 9.7111 0.0056 16 6 3.2864 10.9487 -0.0183 17 6 2.4701 11.1033 1.2389 18 6 1.0932 10.9922 1.1870 19 6 0.3447 11.1287 2.3411 20 6 0.9721 11.3878 3.5452 21 6 2.3486 11.5041 3.5963 22 6 3.0976 11.3619 2.4432 23 6 2.4619 11.0863 -1.3090 24 6 3.6492 11.8720 -1.8905 25 1 4.3882 11.2427 -2.3865 26 9 3.2675 12.9739 -2.6632 27 6 4.0179 12.2334 -0.4420 28 6 1.9180 3.6055 0.0084 29 6 1.2909 2.3750 0.0021 30 1 -0.3632 -1.0277 0.0005 31 1 -0.3633 0.5138 0.8900 32 1 -0.3633 0.5138 -0.8899 33 1 4.0194 0.3784 -0.0017 34 1 5.8883 3.3381 0.7272 35 1 5.6901 3.8255 -1.6027 36 1 7.7560 0.9878 0.4254 37 1 5.8043 0.5311 1.8041 38 1 2.4514 6.0370 0.8937 39 1 2.4513 6.0386 -0.8862 40 1 2.3882 8.5808 0.0051 41 1 4.8021 9.7272 0.9043 42 1 4.8274 9.7112 -0.8754 43 1 0.6025 10.7949 0.2452 44 1 -0.7308 11.0376 2.3013 45 1 0.3870 11.4989 4.4462 46 1 2.8390 11.7061 4.5371 47 1 4.1730 11.4532 2.4829 48 1 2.2777 10.1373 -1.8127 49 1 1.5583 11.6839 -1.1884 50 1 3.5404 13.1458 -0.0845 51 1 5.0899 12.2106 -0.2456 52 1 1.3298 4.5113 0.0144 53 1 0.2124 2.3184 0.0032 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13458982_4974302.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:29:57 Heat of formation + Delta-G solvation = -100.338138 kcal Electronic energy + Delta-G solvation = -37838.009922 eV Core-core repulsion = 32750.668344 eV Total energy + Delta-G solvation = -5087.341578 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 402.172 amu Computer time = 1.24 seconds Orbital eigenvalues (eV) -48.59572 -41.91138 -41.58081 -40.60585 -39.77082 -38.78796 -38.11188 -36.93781 -35.45613 -32.82747 -32.10741 -31.87021 -31.22194 -30.04964 -28.14984 -27.71211 -27.05022 -26.59577 -25.03376 -23.66987 -23.22928 -22.53129 -22.41705 -21.68124 -20.02499 -19.54754 -18.81660 -18.62205 -18.26586 -18.01929 -17.54078 -17.48140 -17.41994 -16.86892 -16.63216 -16.55362 -16.16697 -16.08830 -15.78558 -15.69402 -15.54849 -15.48382 -15.42845 -15.18547 -14.72777 -14.51369 -14.44750 -14.30290 -14.15265 -14.07824 -13.69321 -13.57515 -13.53531 -13.45608 -13.34195 -13.04429 -12.53686 -12.51760 -12.45125 -12.30778 -12.21624 -12.03498 -11.80810 -11.45199 -11.36627 -11.31824 -11.28155 -11.23979 -11.04144 -10.26779 -10.10204 -9.84599 -9.67184 -8.82742 -4.93906 0.06004 0.32843 0.38325 0.47109 1.33116 1.38948 1.41621 1.57755 1.91025 2.34409 2.51194 2.54682 2.79892 3.11479 3.21241 3.39680 3.45613 3.52330 3.58809 3.60390 3.73609 3.85072 3.85340 3.93499 4.04038 4.08532 4.09627 4.10726 4.12642 4.18588 4.20864 4.27278 4.27766 4.44804 4.45296 4.45595 4.57991 4.62437 4.64698 4.67407 4.69856 4.70357 4.79744 4.84381 4.93145 4.96934 5.07488 5.11775 5.12617 5.20326 5.21515 5.25617 5.41233 5.56023 5.61615 5.62749 6.07323 6.11078 6.35823 6.44571 6.52100 7.04734 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.333 6.333 3 C 0.091 3.909 4 C -0.119 4.119 5 C -0.118 4.118 6 C -0.081 4.081 7 O -0.545 6.545 8 Si 0.810 3.190 9 C 0.090 3.910 10 O -0.315 6.315 11 C 0.037 3.963 12 C 0.515 3.485 13 O -0.568 6.568 14 N -0.705 5.705 15 C 0.149 3.851 16 C -0.040 4.040 17 C -0.072 4.072 18 C -0.119 4.119 19 C -0.124 4.124 20 C -0.133 4.133 21 C -0.131 4.131 22 C -0.123 4.123 23 C -0.144 4.144 24 C 0.054 3.946 25 H 0.123 0.877 26 F -0.224 7.224 27 C -0.141 4.141 28 C -0.160 4.160 29 C -0.161 4.161 30 H 0.114 0.886 31 H 0.066 0.934 32 H 0.068 0.932 33 H 0.152 0.848 34 H 0.062 0.938 35 H 0.372 0.628 36 H -0.294 1.294 37 H -0.265 1.265 38 H 0.119 0.881 39 H 0.128 0.872 40 H 0.417 0.583 41 H 0.065 0.935 42 H 0.078 0.922 43 H 0.145 0.855 44 H 0.139 0.861 45 H 0.130 0.870 46 H 0.127 0.873 47 H 0.122 0.878 48 H 0.101 0.899 49 H 0.106 0.894 50 H 0.096 0.904 51 H 0.093 0.907 52 H 0.167 0.833 53 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.402 0.746 0.307 10.433 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.247 6.247 3 C 0.046 3.954 4 C -0.137 4.137 5 C -0.119 4.119 6 C -0.188 4.188 7 O -0.351 6.351 8 Si 0.711 3.289 9 C 0.045 3.955 10 O -0.229 6.229 11 C -0.041 4.041 12 C 0.302 3.698 13 O -0.446 6.446 14 N -0.359 5.359 15 C 0.025 3.975 16 C -0.040 4.040 17 C -0.072 4.072 18 C -0.137 4.137 19 C -0.142 4.142 20 C -0.151 4.151 21 C -0.149 4.149 22 C -0.141 4.141 23 C -0.182 4.182 24 C 0.018 3.982 25 H 0.140 0.860 26 F -0.205 7.205 27 C -0.179 4.179 28 C -0.178 4.178 29 C -0.180 4.180 30 H 0.132 0.868 31 H 0.084 0.916 32 H 0.086 0.914 33 H 0.169 0.831 34 H 0.079 0.921 35 H 0.220 0.780 36 H -0.222 1.222 37 H -0.190 1.190 38 H 0.136 0.864 39 H 0.145 0.855 40 H 0.255 0.745 41 H 0.084 0.916 42 H 0.096 0.904 43 H 0.162 0.838 44 H 0.156 0.844 45 H 0.148 0.852 46 H 0.145 0.855 47 H 0.140 0.860 48 H 0.120 0.880 49 H 0.125 0.875 50 H 0.115 0.885 51 H 0.112 0.888 52 H 0.184 0.816 53 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges -8.479 -0.430 0.881 8.536 hybrid contribution -0.775 2.306 0.623 2.511 sum -9.255 1.876 1.504 9.562 Atomic orbital electron populations 1.23353 0.76386 1.05608 1.02362 1.86088 1.23385 1.26310 1.88924 1.18977 0.91934 0.85360 0.99165 1.20183 0.92435 0.96790 1.04256 1.19451 0.96009 0.90990 1.05493 1.25501 0.92829 1.12456 0.88029 1.86662 1.74205 1.42218 1.31993 0.92226 0.76260 0.79053 0.81314 1.18788 0.91716 0.84234 1.00781 1.86079 1.35465 1.11888 1.89448 1.22696 0.92663 0.81975 1.06719 1.20430 0.88283 0.85226 0.75910 1.90780 1.16514 1.87311 1.49959 1.45540 1.11381 1.04086 1.74921 1.21102 0.92194 0.81366 1.02797 1.20543 0.96132 0.94670 0.92700 1.19469 0.93822 1.00554 0.93347 1.21316 0.92878 1.00181 0.99340 1.21444 1.00978 0.99199 0.92540 1.21458 0.94891 0.99753 0.98986 1.21373 0.94650 1.00097 0.98794 1.21129 1.00299 1.00130 0.92549 1.23764 0.97859 1.02433 0.94122 1.23368 0.99353 0.85502 0.89930 0.85961 1.92789 1.92640 1.57000 1.78039 1.23644 1.02625 0.97446 0.94168 1.21368 0.92065 1.00005 1.04351 1.21418 1.01592 0.90925 1.04059 0.86760 0.91574 0.91378 0.83082 0.92066 0.77967 1.22162 1.19032 0.86375 0.85471 0.74538 0.91643 0.90415 0.83755 0.84364 0.85181 0.85520 0.85972 0.88020 0.87517 0.88535 0.88845 0.81592 0.82131 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.10 9.81 113.37 1.11 1.01 16 2 O -0.33 -0.62 10.50 -93.34 -0.98 -1.60 16 3 C 0.09 0.21 6.69 22.49 0.15 0.36 16 4 C -0.12 -0.50 8.59 22.35 0.19 -0.30 16 5 C -0.12 -0.68 5.28 -19.78 -0.10 -0.78 16 6 C -0.08 -0.64 2.33 71.24 0.17 -0.47 16 7 O -0.54 -5.19 12.65 -148.98 -1.89 -7.07 16 8 Si 0.81 4.25 30.17 68.60 2.07 6.32 16 9 C 0.09 0.27 6.62 22.49 0.15 0.42 16 10 O -0.32 -1.24 8.56 -74.22 -0.64 -1.88 16 11 C 0.04 -0.18 5.22 71.24 0.37 0.20 16 12 C 0.52 0.30 7.91 87.66 0.69 0.99 16 13 O -0.57 -6.68 16.50 16.02 0.26 -6.41 16 14 N -0.71 4.16 5.16 -463.08 -2.39 1.77 16 15 C 0.15 -0.63 4.85 86.38 0.42 -0.21 16 16 C -0.04 0.27 0.63 -52.40 -0.03 0.23 16 17 C -0.07 0.32 4.61 -19.87 -0.09 0.23 16 18 C -0.12 0.70 9.05 22.27 0.20 0.91 16 19 C -0.12 0.54 10.05 22.27 0.22 0.76 16 20 C -0.13 0.31 10.05 22.27 0.22 0.53 16 21 C -0.13 0.16 10.05 22.27 0.22 0.38 16 22 C -0.12 0.22 9.33 22.27 0.21 0.43 16 23 C -0.14 1.15 6.03 31.12 0.19 1.34 16 24 C 0.05 -0.22 5.32 31.12 0.17 -0.05 16 25 H 0.12 -0.78 7.62 -2.39 -0.02 -0.80 16 26 F -0.22 -0.73 17.41 44.97 0.78 0.05 16 27 C -0.14 0.68 7.00 31.12 0.22 0.90 16 28 C -0.16 0.44 9.03 22.36 0.20 0.64 16 29 C -0.16 0.35 9.03 22.36 0.20 0.56 16 30 H 0.11 -0.99 8.14 -2.39 -0.02 -1.01 16 31 H 0.07 -0.55 7.66 -2.39 -0.02 -0.56 16 32 H 0.07 -0.57 7.66 -2.39 -0.02 -0.59 16 33 H 0.15 0.22 5.13 -2.91 -0.01 0.21 16 34 H 0.06 0.64 7.82 -2.39 -0.02 0.62 16 35 H 0.37 2.56 8.60 -74.06 -0.64 1.92 16 36 H -0.29 -3.40 7.11 99.48 0.71 -2.69 16 37 H -0.26 -1.92 7.11 99.48 0.71 -1.21 16 38 H 0.12 -1.17 7.65 -2.39 -0.02 -1.19 16 39 H 0.13 -1.46 7.67 -2.39 -0.02 -1.48 16 40 H 0.42 -4.88 8.21 -92.70 -0.76 -5.64 16 41 H 0.07 -0.05 7.95 -2.39 -0.02 -0.07 16 42 H 0.08 -0.26 7.31 -2.39 -0.02 -0.28 16 43 H 0.14 -1.50 6.41 -2.91 -0.02 -1.52 16 44 H 0.14 -1.08 8.06 -2.91 -0.02 -1.11 16 45 H 0.13 -0.62 8.06 -2.91 -0.02 -0.64 16 46 H 0.13 -0.38 8.06 -2.91 -0.02 -0.40 16 47 H 0.12 -0.33 8.06 -2.91 -0.02 -0.36 16 48 H 0.10 -1.12 7.89 -2.38 -0.02 -1.14 16 49 H 0.11 -0.83 6.79 -2.39 -0.02 -0.85 16 50 H 0.10 -0.29 8.10 -2.38 -0.02 -0.31 16 51 H 0.09 -0.55 8.10 -2.39 -0.02 -0.57 16 52 H 0.17 -1.71 6.29 -2.91 -0.02 -1.73 16 53 H 0.16 -1.28 6.29 -2.91 -0.02 -1.30 16 Total: 0.00 -25.38 436.13 1.92 -23.46 By element: Atomic # 1 Polarization: -22.32 SS G_CDS: -0.39 Total: -22.70 kcal Atomic # 6 Polarization: 2.98 SS G_CDS: 5.08 Total: 8.06 kcal Atomic # 7 Polarization: 4.16 SS G_CDS: -2.39 Total: 1.77 kcal Atomic # 8 Polarization: -13.73 SS G_CDS: -3.24 Total: -16.96 kcal Atomic # 9 Polarization: -0.73 SS G_CDS: 0.78 Total: 0.05 kcal Atomic # 14 Polarization: 4.25 SS G_CDS: 2.07 Total: 6.32 kcal Total: -25.38 1.92 -23.46 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13458982_4974302.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -76.877 kcal (2) G-P(sol) polarization free energy of solvation -25.381 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -102.258 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.920 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.461 kcal (6) G-S(sol) free energy of system = (1) + (5) -100.338 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.24 seconds