Wall clock time and date at job start Sat Mar 6 2021 21:30:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86300 * 109.47421 * 2 1 4 4 C 1.50701 * 109.46881 * 119.99779 * 2 1 3 5 5 C 1.38243 * 119.94234 * 64.99879 * 4 2 1 6 6 C 1.38237 * 120.05051 * 180.02562 * 5 4 2 7 7 Br 1.89098 * 120.03829 * 179.97438 * 6 5 4 8 8 C 1.38794 * 119.92391 * 0.02562 * 6 5 4 9 9 O 1.35915 * 120.05662 * 180.02562 * 8 6 5 10 10 C 1.42900 * 117.00026 * 179.97438 * 9 8 6 11 11 C 1.50703 * 109.47226 * 179.97438 * 10 9 8 12 12 O 1.21278 * 119.99978 * 359.97438 * 11 10 9 13 13 N 1.34781 * 119.99836 * 180.02562 * 11 10 9 14 14 C 1.46499 * 119.99732 * 180.02562 * 13 11 10 15 15 C 1.52999 * 109.46748 * 175.95544 * 14 13 11 16 16 C 1.50698 * 112.85411 * 65.11508 * 15 14 13 17 17 C 1.38243 * 119.99529 * 245.84342 * 16 15 14 18 18 C 1.38230 * 119.99431 * 179.74016 * 17 16 15 19 19 C 1.38236 * 120.00273 * 0.55041 * 18 17 16 20 20 C 1.38232 * 119.99985 * 359.70065 * 19 18 17 21 21 C 1.38226 * 120.00282 * 66.11011 * 16 15 14 22 22 C 1.53782 * 113.61512 * 293.90900 * 15 14 13 23 23 C 1.53786 * 87.08373 * 270.88919 * 22 15 14 24 24 H 1.09004 * 113.61365 * 89.19872 * 23 22 15 25 25 F 1.39896 * 113.61201 * 220.01455 * 23 22 15 26 26 C 1.53790 * 113.60947 * 196.30701 * 15 14 13 27 27 C 1.38717 * 119.88266 * 0.27296 * 8 6 5 28 28 C 1.38145 * 119.95220 * 359.47589 * 27 8 6 29 29 H 0.96704 * 113.99729 * 300.00183 * 1 2 3 30 30 H 1.09000 * 109.47385 * 239.99553 * 2 1 3 31 31 H 1.48503 * 109.99972 * 178.67888 * 3 2 1 32 32 H 1.48502 * 109.99676 * 299.99697 * 3 2 1 33 33 H 1.08008 * 119.97783 * 0.02562 * 5 4 2 34 34 H 1.08999 * 109.47266 * 59.99805 * 10 9 8 35 35 H 1.09004 * 109.47158 * 300.00032 * 10 9 8 36 36 H 0.96996 * 119.99997 * 359.97438 * 13 11 10 37 37 H 1.08999 * 109.46766 * 295.95243 * 14 13 11 38 38 H 1.08994 * 109.47405 * 55.94852 * 14 13 11 39 39 H 1.07997 * 119.99537 * 359.97438 * 17 16 15 40 40 H 1.08011 * 119.99797 * 180.27212 * 18 17 16 41 41 H 1.08002 * 119.99649 * 179.72011 * 19 18 17 42 42 H 1.08004 * 119.99840 * 179.97438 * 20 19 18 43 43 H 1.07997 * 120.00154 * 0.02562 * 21 16 15 44 44 H 1.09004 * 113.60847 * 25.44006 * 22 15 14 45 45 H 1.08998 * 113.61526 * 156.25505 * 22 15 14 46 46 H 1.09005 * 113.61327 * 203.66440 * 26 15 14 47 47 H 1.08995 * 113.61762 * 334.56732 * 26 15 14 48 48 H 1.08006 * 120.02035 * 179.72188 * 27 8 6 49 49 H 1.08003 * 119.96344 * 180.25403 * 28 27 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.6839 -2.0602 1.3973 6 6 2.1432 -2.7140 2.5254 7 35 1.8040 -4.5602 2.7535 8 6 2.8526 -2.0134 3.4910 9 8 3.3058 -2.6536 4.6010 10 6 4.0288 -1.8698 5.5522 11 6 4.4479 -2.7423 6.7073 12 8 4.1558 -3.9193 6.7153 13 7 5.1465 -2.2142 7.7319 14 6 5.5544 -3.0626 8.8544 15 6 6.4132 -2.2477 9.8236 16 6 5.6498 -1.1280 10.4827 17 6 5.9846 0.1867 10.2171 18 6 5.2808 1.2139 10.8175 19 6 4.2498 0.9263 11.6922 20 6 3.9184 -0.3884 11.9618 21 6 4.6185 -1.4155 11.3570 22 6 7.7624 -1.8081 9.2309 23 6 8.3359 -3.1354 9.7547 24 1 8.2509 -3.9582 9.0448 25 9 9.6201 -3.0159 10.2966 26 6 7.2152 -3.1114 10.8115 27 6 3.0937 -0.6577 3.3236 28 6 2.6370 -0.0104 2.1918 29 1 -0.3933 0.4418 0.7651 30 1 1.7924 -0.5139 -0.8899 31 1 3.5347 1.7702 0.0322 32 1 1.5616 2.4678 -1.2086 33 1 1.1314 -2.6046 0.6456 34 1 3.3922 -1.0642 5.9181 35 1 4.9135 -1.4462 5.0766 36 1 5.3798 -1.2728 7.7256 37 1 4.6687 -3.4287 9.3736 38 1 6.1315 -3.9080 8.4801 39 1 6.7935 0.4112 9.5377 40 1 5.5395 2.2411 10.6067 41 1 3.7029 1.7289 12.1648 42 1 3.1131 -0.6130 12.6455 43 1 4.3601 -2.4426 11.5681 44 1 7.7579 -1.7333 8.1434 45 1 8.1854 -0.9273 9.7139 46 1 7.4895 -2.5871 11.7270 47 1 6.7693 -4.0881 10.9993 48 1 3.6417 -0.1094 4.0757 49 1 2.8282 1.0442 2.0594 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13458982_6201210.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:30:12 Heat of formation + Delta-G solvation = -57.677853 kcal Electronic energy + Delta-G solvation = -35043.542952 eV Core-core repulsion = 30092.453071 eV Total energy + Delta-G solvation = -4951.089881 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 450.067 amu Computer time = 1.16 seconds Orbital eigenvalues (eV) -48.57906 -41.81949 -41.42618 -40.36042 -39.12421 -38.67618 -37.20733 -35.41712 -33.60961 -32.08490 -31.92146 -31.82309 -30.73456 -30.10157 -27.95448 -27.05828 -26.27480 -24.98629 -23.90765 -23.19469 -22.51206 -22.39057 -21.65339 -20.00042 -19.57985 -18.59344 -18.29291 -18.06320 -17.53602 -17.44678 -17.15798 -16.88397 -16.52875 -16.37965 -16.15980 -15.88931 -15.79758 -15.67890 -15.51948 -15.45904 -15.04935 -14.73983 -14.61609 -14.51602 -14.41784 -14.25490 -13.89486 -13.79385 -13.67530 -13.61415 -13.50118 -13.33163 -12.50313 -12.43007 -12.34801 -12.19019 -12.17715 -12.12753 -11.90734 -11.84081 -11.77089 -11.32795 -11.25700 -11.23344 -11.03358 -10.42131 -10.22500 -9.97602 -9.79792 -9.62682 -9.32400 -4.97673 -0.05455 0.11806 0.42881 0.51946 0.63993 1.33989 1.38830 1.45893 1.67361 2.02610 2.39693 2.46421 2.84429 3.13758 3.23793 3.41513 3.48184 3.49651 3.59098 3.62542 3.67790 3.76011 3.84165 3.87545 4.02997 4.07422 4.11942 4.13616 4.15331 4.21925 4.32414 4.33118 4.49377 4.51014 4.61938 4.64570 4.65500 4.68270 4.71409 4.73240 4.84644 4.86795 4.96191 5.00212 5.11780 5.17453 5.23669 5.25896 5.27917 5.48360 5.60887 5.66333 5.67721 6.05688 6.12223 6.41052 6.79844 7.10340 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.558 6.558 2 C -0.076 4.076 3 Si 0.788 3.212 4 C -0.153 4.153 5 C -0.036 4.036 6 C -0.145 4.145 7 Br -0.055 7.055 8 C 0.149 3.851 9 O -0.305 6.305 10 C 0.032 3.968 11 C 0.514 3.486 12 O -0.566 6.566 13 N -0.705 5.705 14 C 0.149 3.851 15 C -0.039 4.039 16 C -0.072 4.072 17 C -0.119 4.119 18 C -0.123 4.123 19 C -0.132 4.132 20 C -0.131 4.131 21 C -0.122 4.122 22 C -0.144 4.144 23 C 0.053 3.947 24 H 0.121 0.879 25 F -0.224 7.224 26 C -0.140 4.140 27 C -0.189 4.189 28 C -0.052 4.052 29 H 0.396 0.604 30 H 0.104 0.896 31 H -0.276 1.276 32 H -0.305 1.305 33 H 0.134 0.866 34 H 0.131 0.869 35 H 0.132 0.868 36 H 0.418 0.582 37 H 0.066 0.934 38 H 0.075 0.925 39 H 0.144 0.856 40 H 0.139 0.861 41 H 0.130 0.870 42 H 0.127 0.873 43 H 0.122 0.878 44 H 0.100 0.900 45 H 0.107 0.893 46 H 0.096 0.904 47 H 0.093 0.907 48 H 0.181 0.819 49 H 0.168 0.832 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.554 10.341 3.381 10.990 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.366 6.366 2 C -0.185 4.185 3 Si 0.693 3.307 4 C -0.155 4.155 5 C -0.056 4.056 6 C -0.225 4.225 7 Br 0.030 6.970 8 C 0.101 3.899 9 O -0.217 6.217 10 C -0.046 4.046 11 C 0.300 3.700 12 O -0.444 6.444 13 N -0.359 5.359 14 C 0.025 3.975 15 C -0.040 4.040 16 C -0.072 4.072 17 C -0.137 4.137 18 C -0.141 4.141 19 C -0.150 4.150 20 C -0.149 4.149 21 C -0.140 4.140 22 C -0.181 4.181 23 C 0.017 3.983 24 H 0.139 0.861 25 F -0.205 7.205 26 C -0.179 4.179 27 C -0.208 4.208 28 C -0.070 4.070 29 H 0.246 0.754 30 H 0.121 0.879 31 H -0.202 1.202 32 H -0.234 1.234 33 H 0.152 0.848 34 H 0.148 0.852 35 H 0.150 0.850 36 H 0.255 0.745 37 H 0.085 0.915 38 H 0.094 0.906 39 H 0.162 0.838 40 H 0.157 0.843 41 H 0.148 0.852 42 H 0.145 0.855 43 H 0.140 0.860 44 H 0.119 0.881 45 H 0.125 0.875 46 H 0.115 0.885 47 H 0.111 0.889 48 H 0.198 0.802 49 H 0.185 0.815 Dipole moment (debyes) X Y Z Total from point charges 1.797 8.851 2.606 9.400 hybrid contribution 0.117 -0.329 -0.067 0.356 sum 1.914 8.521 2.540 9.095 Atomic orbital electron populations 1.86492 1.17375 1.82238 1.50511 1.25281 0.85274 1.11380 0.96575 0.93811 0.77837 0.74016 0.85017 1.20372 1.02641 0.93702 0.98743 1.20878 0.95814 0.94521 0.94401 1.21279 1.09839 0.91912 0.99499 1.96760 1.94945 1.07580 1.97707 1.18802 0.93256 0.91772 0.86057 1.86247 1.68670 1.37871 1.28908 1.22851 0.99700 0.93711 0.88306 1.20437 0.77891 0.87962 0.83727 1.90800 1.55486 1.18647 1.79495 1.45521 1.56140 1.14332 1.19922 1.21091 0.98135 0.92478 0.85767 1.20540 0.93054 0.94649 0.95723 1.19448 0.96304 0.93730 0.97731 1.21309 1.00263 0.91477 1.00634 1.21440 0.95625 1.00269 0.96721 1.21457 0.98107 0.96870 0.98563 1.21368 1.00150 0.93227 1.00107 1.21117 0.96021 0.99633 0.97269 1.23756 0.93447 0.97655 1.03257 1.23432 0.76838 1.00957 0.97099 0.86148 1.92786 1.42779 1.97265 1.87670 1.23688 0.94830 1.01569 0.97772 1.21580 1.05988 0.91509 1.01709 1.21254 0.93542 1.00640 0.91556 0.75407 0.87893 1.20247 1.23354 0.84766 0.85180 0.85039 0.74460 0.91538 0.90645 0.83800 0.84326 0.85167 0.85539 0.86021 0.88112 0.87478 0.88500 0.88880 0.80198 0.81536 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 0.58 12.83 -148.98 -1.91 -1.33 16 2 C -0.08 0.20 2.80 71.24 0.20 0.40 16 3 Si 0.79 -4.70 29.80 68.60 2.04 -2.66 16 4 C -0.15 0.33 5.35 -19.85 -0.11 0.22 16 5 C -0.04 -0.10 9.42 22.27 0.21 0.11 16 6 C -0.15 -0.77 6.24 22.40 0.14 -0.63 16 7 Br -0.06 -0.52 33.16 -20.37 -0.68 -1.19 16 8 C 0.15 0.23 6.68 22.52 0.15 0.38 16 9 O -0.30 -1.14 9.01 -73.55 -0.66 -1.81 16 10 C 0.03 -0.19 5.22 71.24 0.37 0.18 16 11 C 0.51 0.05 7.91 87.66 0.69 0.75 16 12 O -0.57 -6.83 16.50 16.01 0.26 -6.57 16 13 N -0.70 4.60 5.19 -463.07 -2.40 2.20 16 14 C 0.15 -0.68 4.84 86.38 0.42 -0.26 16 15 C -0.04 0.28 0.63 -52.40 -0.03 0.24 16 16 C -0.07 0.39 4.51 -19.87 -0.09 0.30 16 17 C -0.12 0.82 9.05 22.27 0.20 1.02 16 18 C -0.12 0.68 10.05 22.27 0.22 0.90 16 19 C -0.13 0.46 10.05 22.27 0.22 0.68 16 20 C -0.13 0.30 10.05 22.27 0.22 0.52 16 21 C -0.12 0.34 9.34 22.27 0.21 0.55 16 22 C -0.14 1.17 6.10 31.12 0.19 1.36 16 23 C 0.05 -0.21 5.32 31.21 0.17 -0.04 16 24 H 0.12 -0.73 7.61 -2.38 -0.02 -0.74 16 25 F -0.22 -0.75 17.41 44.97 0.78 0.04 16 26 C -0.14 0.71 7.01 31.22 0.22 0.93 16 27 C -0.19 1.22 9.04 22.36 0.20 1.42 16 28 C -0.05 0.36 8.66 22.26 0.19 0.55 16 29 H 0.40 -3.75 8.70 -74.05 -0.64 -4.40 16 30 H 0.10 -0.07 7.96 -2.39 -0.02 -0.09 16 31 H -0.28 0.69 7.11 99.48 0.71 1.40 16 32 H -0.31 -0.88 7.11 99.48 0.71 -0.17 16 33 H 0.13 0.45 8.06 -2.91 -0.02 0.43 16 34 H 0.13 -1.67 7.65 -2.39 -0.02 -1.69 16 35 H 0.13 -1.75 7.68 -2.38 -0.02 -1.77 16 36 H 0.42 -5.27 8.23 -92.71 -0.76 -6.03 16 37 H 0.07 -0.10 7.97 -2.39 -0.02 -0.12 16 38 H 0.08 -0.23 7.31 -2.39 -0.02 -0.25 16 39 H 0.14 -1.62 6.41 -2.91 -0.02 -1.64 16 40 H 0.14 -1.25 8.06 -2.91 -0.02 -1.27 16 41 H 0.13 -0.76 8.06 -2.91 -0.02 -0.79 16 42 H 0.13 -0.50 8.06 -2.91 -0.02 -0.53 16 43 H 0.12 -0.43 8.06 -2.91 -0.02 -0.46 16 44 H 0.10 -1.10 7.95 -2.38 -0.02 -1.12 16 45 H 0.11 -0.87 6.79 -2.39 -0.02 -0.88 16 46 H 0.10 -0.32 8.09 -2.38 -0.02 -0.34 16 47 H 0.09 -0.56 8.10 -2.39 -0.02 -0.58 16 48 H 0.18 -2.68 6.30 -2.91 -0.02 -2.70 16 49 H 0.17 -2.21 4.90 -2.91 -0.01 -2.23 16 Total: 0.00 -28.81 428.31 1.10 -27.72 By element: Atomic # 1 Polarization: -25.62 SS G_CDS: -0.35 Total: -25.97 kcal Atomic # 6 Polarization: 5.57 SS G_CDS: 4.00 Total: 9.58 kcal Atomic # 7 Polarization: 4.60 SS G_CDS: -2.40 Total: 2.20 kcal Atomic # 8 Polarization: -7.39 SS G_CDS: -2.31 Total: -9.70 kcal Atomic # 9 Polarization: -0.75 SS G_CDS: 0.78 Total: 0.04 kcal Atomic # 14 Polarization: -4.70 SS G_CDS: 2.04 Total: -2.66 kcal Atomic # 35 Polarization: -0.52 SS G_CDS: -0.68 Total: -1.19 kcal Total: -28.81 1.10 -27.72 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13458982_6201210.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -29.963 kcal (2) G-P(sol) polarization free energy of solvation -28.811 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -58.774 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.096 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.715 kcal (6) G-S(sol) free energy of system = (1) + (5) -57.678 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.16 seconds