Wall clock time and date at job start Sat Mar 6 2021 21:30:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42911 * 1 3 3 Si 1.86295 * 109.47055 * 2 1 4 4 C 1.50700 * 109.46975 * 240.00019 * 2 1 3 5 5 C 1.35451 * 125.56408 * 120.02288 * 4 2 1 6 6 C 1.39833 * 107.86421 * 179.75153 * 5 4 2 7 7 C 1.37864 * 107.08803 * 0.36654 * 6 5 4 8 8 C 1.46679 * 126.23623 * 179.89933 * 7 6 5 9 9 O 1.21693 * 119.99962 * 359.69340 * 8 7 6 10 10 N 1.34781 * 120.00153 * 179.68943 * 8 7 6 11 11 C 1.46500 * 119.99960 * 180.02562 * 10 8 7 12 12 C 1.52991 * 109.46980 * 175.10622 * 11 10 8 13 13 C 1.50705 * 112.85037 * 294.00655 * 12 11 10 14 14 C 1.38234 * 119.99888 * 113.51736 * 13 12 11 15 15 C 1.38235 * 120.00183 * 179.76953 * 14 13 12 16 16 C 1.38236 * 119.99611 * 0.49884 * 15 14 13 17 17 C 1.38238 * 119.99940 * 359.75076 * 16 15 14 18 18 C 1.38230 * 120.00287 * 359.97438 * 17 16 15 19 19 C 1.53780 * 113.61450 * 162.70195 * 12 11 10 20 20 C 1.53782 * 87.08073 * 270.88204 * 19 12 11 21 21 H 1.08998 * 113.61194 * 89.11376 * 20 19 12 22 22 F 1.39900 * 113.68979 * 220.00300 * 20 19 12 23 23 C 1.53781 * 87.08107 * 334.56490 * 20 19 12 24 24 N 1.35538 * 125.56442 * 300.00508 * 4 2 1 25 25 H 0.96702 * 113.99261 * 59.99622 * 1 2 3 26 26 H 1.08997 * 109.46918 * 120.00437 * 2 1 3 27 27 H 1.48497 * 110.00511 * 298.68077 * 3 2 1 28 28 H 1.48503 * 109.99798 * 60.00375 * 3 2 1 29 29 H 1.08002 * 126.06535 * 359.97438 * 5 4 2 30 30 H 1.08002 * 126.45642 * 180.22851 * 6 5 4 31 31 H 0.96997 * 119.99773 * 359.97438 * 10 8 7 32 32 H 1.08992 * 109.47144 * 295.10668 * 11 10 8 33 33 H 1.09005 * 109.46765 * 55.10541 * 11 10 8 34 34 H 1.08003 * 119.99827 * 359.97438 * 14 13 12 35 35 H 1.07995 * 120.00639 * 180.22767 * 15 14 13 36 36 H 1.08003 * 119.99883 * 179.73119 * 16 15 14 37 37 H 1.08007 * 119.99630 * 179.97438 * 17 16 15 38 38 H 1.08000 * 120.00266 * 179.97438 * 18 17 16 39 39 H 1.09003 * 113.61702 * 25.43561 * 19 12 11 40 40 H 1.09005 * 113.61852 * 156.33882 * 19 12 11 41 41 H 1.09000 * 113.61690 * 270.88250 * 23 20 19 42 42 H 1.09003 * 113.61225 * 139.97690 * 23 20 19 43 43 H 0.96999 * 125.67887 * 0.02562 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 2.7138 -0.1637 -2.1916 6 6 2.9619 -1.1476 -3.1537 7 6 2.3026 -2.2878 -2.7466 8 6 2.2799 -3.5744 -3.4506 9 8 2.8788 -3.7033 -4.5021 10 7 1.5958 -4.6139 -2.9329 11 6 1.5736 -5.8991 -3.6359 12 6 0.8367 -6.9339 -2.7834 13 6 1.5621 -7.2615 -1.5037 14 6 1.0082 -6.9119 -0.2863 15 6 1.6713 -7.2167 0.8877 16 6 2.8931 -7.8618 0.8440 17 6 3.4493 -8.2068 -0.3736 18 6 2.7836 -7.9071 -1.5474 19 6 0.3860 -8.1742 -3.5730 20 6 -0.9169 -7.4136 -3.8714 21 1 -0.8712 -6.8075 -4.7761 22 9 -2.0619 -8.2152 -3.8117 23 6 -0.6547 -6.6171 -2.5823 24 7 1.6743 -2.0008 -1.5559 25 1 -0.3932 0.4418 -0.7651 26 1 1.7924 -0.5139 0.8899 27 1 1.5880 2.4586 -1.2242 28 1 1.5616 2.4678 1.2086 29 1 3.0835 0.8509 -2.2095 30 1 3.5561 -1.0348 -4.0485 31 1 1.1189 -4.5114 -2.0946 32 1 1.0602 -5.7824 -4.5902 33 1 2.5957 -6.2347 -3.8118 34 1 0.0559 -6.4037 -0.2524 35 1 1.2369 -6.9468 1.8389 36 1 3.4132 -8.0960 1.7611 37 1 4.4041 -8.7105 -0.4077 38 1 3.2184 -8.1763 -2.4987 39 1 0.9896 -8.3708 -4.4591 40 1 0.2428 -9.0588 -2.9524 41 1 -1.0823 -7.0759 -1.6909 42 1 -0.8912 -5.5565 -2.6687 43 1 1.1370 -2.6190 -1.0363 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13458982_6580494.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:30:22 Heat of formation + Delta-G solvation = -15.758397 kcal Electronic energy + Delta-G solvation = -28275.362304 eV Core-core repulsion = 24202.928230 eV Total energy + Delta-G solvation = -4072.434074 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.137 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -48.62182 -42.55514 -41.57547 -40.08345 -38.79532 -37.82352 -35.52445 -32.32454 -32.03233 -31.89452 -31.47536 -28.89353 -27.22410 -26.53832 -25.03654 -23.34850 -23.04499 -22.54751 -21.52444 -21.24075 -20.35318 -19.48049 -18.47776 -18.13583 -17.53811 -17.08195 -16.78836 -16.58425 -16.30652 -16.23685 -16.06183 -15.61353 -15.53254 -15.27968 -15.09805 -14.83432 -14.70059 -14.35737 -14.32083 -14.21455 -13.97324 -13.69402 -13.67659 -13.54397 -13.41378 -12.57662 -12.47197 -12.34354 -12.24289 -11.91271 -11.83788 -11.44586 -11.38377 -11.29464 -10.84452 -10.35165 -10.07572 -9.87111 -9.69121 -9.28455 -4.82781 0.28796 0.36545 0.44719 1.22625 1.55361 1.70252 1.85965 1.94667 2.20762 2.26400 2.77591 3.08252 3.18932 3.34402 3.37200 3.49463 3.55374 3.59734 3.79387 3.82993 4.06545 4.08350 4.15890 4.25218 4.26305 4.32888 4.43424 4.50628 4.56538 4.59000 4.61464 4.64642 4.67803 4.80038 4.90596 4.95932 5.05167 5.09962 5.11202 5.17307 5.22351 5.53520 5.57294 5.59060 5.60364 5.79197 6.05228 6.23419 6.39806 6.41296 6.98328 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.548 6.548 2 C -0.063 4.063 3 Si 0.793 3.207 4 C 0.032 3.968 5 C -0.204 4.204 6 C -0.116 4.116 7 C -0.065 4.065 8 C 0.590 3.410 9 O -0.568 6.568 10 N -0.712 5.712 11 C 0.147 3.853 12 C -0.042 4.042 13 C -0.071 4.071 14 C -0.124 4.124 15 C -0.125 4.125 16 C -0.132 4.132 17 C -0.129 4.129 18 C -0.122 4.122 19 C -0.137 4.137 20 C 0.056 3.944 21 H 0.125 0.875 22 F -0.223 7.223 23 C -0.148 4.148 24 N -0.513 5.513 25 H 0.389 0.611 26 H 0.134 0.866 27 H -0.282 1.282 28 H -0.299 1.299 29 H 0.168 0.832 30 H 0.146 0.854 31 H 0.406 0.594 32 H 0.080 0.920 33 H 0.072 0.928 34 H 0.139 0.861 35 H 0.137 0.863 36 H 0.132 0.868 37 H 0.130 0.870 38 H 0.126 0.874 39 H 0.098 0.902 40 H 0.097 0.903 41 H 0.105 0.895 42 H 0.095 0.905 43 H 0.426 0.574 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.699 0.924 4.065 4.227 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.356 6.356 2 C -0.171 4.171 3 Si 0.696 3.304 4 C -0.087 4.087 5 C -0.228 4.228 6 C -0.143 4.143 7 C -0.178 4.178 8 C 0.379 3.621 9 O -0.447 6.447 10 N -0.363 5.363 11 C 0.024 3.976 12 C -0.042 4.042 13 C -0.072 4.072 14 C -0.142 4.142 15 C -0.143 4.143 16 C -0.150 4.150 17 C -0.147 4.147 18 C -0.140 4.140 19 C -0.175 4.175 20 C 0.020 3.980 21 H 0.142 0.858 22 F -0.204 7.204 23 C -0.186 4.186 24 N -0.110 5.110 25 H 0.239 0.761 26 H 0.152 0.848 27 H -0.208 1.208 28 H -0.226 1.226 29 H 0.185 0.815 30 H 0.164 0.836 31 H 0.242 0.758 32 H 0.099 0.901 33 H 0.090 0.910 34 H 0.157 0.843 35 H 0.154 0.846 36 H 0.150 0.850 37 H 0.148 0.852 38 H 0.144 0.856 39 H 0.116 0.884 40 H 0.115 0.885 41 H 0.123 0.877 42 H 0.113 0.887 43 H 0.265 0.735 Dipole moment (debyes) X Y Z Total from point charges 0.864 1.134 3.913 4.164 hybrid contribution -1.461 -0.757 -0.001 1.645 sum -0.597 0.377 3.912 3.975 Atomic orbital electron populations 1.86579 1.18082 1.80486 1.50457 1.25071 0.83615 1.12136 0.96313 0.93299 0.90259 0.70164 0.76643 1.21267 1.02954 0.84964 0.99512 1.20938 1.05137 1.01237 0.95524 1.21486 1.00736 0.91400 1.00672 1.20299 1.09062 0.96302 0.92161 1.17182 0.78362 0.82636 0.83966 1.90853 1.46102 1.83713 1.24036 1.45625 1.52782 1.11102 1.26813 1.21171 1.01069 0.80921 0.94432 1.20577 0.93964 0.96233 0.93471 1.19473 0.94944 0.99096 0.93641 1.21280 1.00634 1.00681 0.91601 1.21426 0.95287 0.98515 0.99050 1.21461 0.96351 0.98758 0.98435 1.21398 1.00524 1.00032 0.92718 1.21151 0.95002 0.99004 0.98848 1.23623 0.95622 0.96946 1.01336 1.23351 0.81249 0.92451 1.00916 0.85786 1.92790 1.53893 1.75959 1.97761 1.23774 0.93824 1.02432 0.98539 1.41884 1.39759 1.11301 1.18039 0.76091 0.84788 1.20841 1.22635 0.81464 0.83585 0.75804 0.90148 0.90971 0.84302 0.84552 0.85031 0.85184 0.85621 0.88386 0.88469 0.87653 0.88687 0.73473 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.53 12.88 -148.98 -1.92 -0.39 16 2 C -0.06 0.33 3.08 71.24 0.22 0.55 16 3 Si 0.79 -4.29 30.54 68.60 2.10 -2.19 16 4 C 0.03 -0.09 6.47 41.34 0.27 0.17 16 5 C -0.20 0.23 9.32 22.01 0.21 0.44 16 6 C -0.12 -0.39 10.65 22.57 0.24 -0.15 16 7 C -0.06 -0.16 7.06 40.35 0.28 0.12 16 8 C 0.59 2.92 7.79 86.45 0.67 3.59 16 9 O -0.57 -7.47 16.88 -4.33 -0.07 -7.55 16 10 N -0.71 1.42 5.17 -467.09 -2.42 -1.00 16 11 C 0.15 -0.37 4.85 86.38 0.42 0.05 16 12 C -0.04 0.21 0.63 -52.40 -0.03 0.18 16 13 C -0.07 0.20 4.67 -19.86 -0.09 0.10 16 14 C -0.12 0.45 9.05 22.27 0.20 0.66 16 15 C -0.12 0.31 10.05 22.27 0.22 0.54 16 16 C -0.13 0.14 10.05 22.27 0.22 0.37 16 17 C -0.13 0.04 10.05 22.27 0.22 0.27 16 18 C -0.12 0.09 9.33 22.27 0.21 0.30 16 19 C -0.14 0.58 7.00 31.12 0.22 0.80 16 20 C 0.06 -0.17 5.31 31.12 0.17 -0.01 16 21 H 0.12 -0.72 7.61 -2.39 -0.02 -0.73 16 22 F -0.22 -0.90 17.41 44.97 0.78 -0.12 16 23 C -0.15 0.88 5.97 31.12 0.19 1.06 16 24 N -0.51 1.53 5.99 -171.93 -1.03 0.50 16 25 H 0.39 -2.84 8.70 -74.06 -0.64 -3.49 16 26 H 0.13 -1.05 7.96 -2.39 -0.02 -1.07 16 27 H -0.28 0.20 7.11 99.48 0.71 0.90 16 28 H -0.30 -0.60 7.11 99.48 0.71 0.10 16 29 H 0.17 -0.90 6.17 -2.91 -0.02 -0.91 16 30 H 0.15 0.57 8.06 -2.91 -0.02 0.55 16 31 H 0.41 -2.66 7.21 -92.71 -0.67 -3.33 16 32 H 0.08 -0.21 7.31 -2.39 -0.02 -0.23 16 33 H 0.07 0.02 7.95 -2.38 -0.02 0.00 16 34 H 0.14 -1.06 6.44 -2.91 -0.02 -1.08 16 35 H 0.14 -0.79 8.06 -2.91 -0.02 -0.81 16 36 H 0.13 -0.49 8.06 -2.91 -0.02 -0.52 16 37 H 0.13 -0.34 8.06 -2.91 -0.02 -0.36 16 38 H 0.13 -0.28 8.06 -2.91 -0.02 -0.30 16 39 H 0.10 -0.58 8.10 -2.39 -0.02 -0.60 16 40 H 0.10 -0.24 8.10 -2.38 -0.02 -0.26 16 41 H 0.11 -0.59 6.83 -2.39 -0.02 -0.61 16 42 H 0.09 -0.77 7.75 -2.39 -0.02 -0.79 16 43 H 0.43 -3.24 8.19 -92.71 -0.76 -4.00 16 Total: 0.00 -19.55 363.02 0.31 -19.24 By element: Atomic # 1 Polarization: -16.57 SS G_CDS: -0.96 Total: -17.53 kcal Atomic # 6 Polarization: 5.21 SS G_CDS: 3.83 Total: 9.04 kcal Atomic # 7 Polarization: 2.95 SS G_CDS: -3.45 Total: -0.50 kcal Atomic # 8 Polarization: -5.94 SS G_CDS: -1.99 Total: -7.94 kcal Atomic # 9 Polarization: -0.90 SS G_CDS: 0.78 Total: -0.12 kcal Atomic # 14 Polarization: -4.29 SS G_CDS: 2.10 Total: -2.19 kcal Total: -19.55 0.31 -19.24 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13458982_6580494.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 3.483 kcal (2) G-P(sol) polarization free energy of solvation -19.555 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -16.072 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.314 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.241 kcal (6) G-S(sol) free energy of system = (1) + (5) -15.758 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds