Wall clock time and date at job start Sat Mar 6 2021 21:30:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.33819 * 122.44649 * 2 1 4 4 C 1.50693 * 124.52427 * 359.94697 * 3 2 1 5 5 O 1.42895 * 109.47161 * 30.00075 * 4 3 2 6 6 Si 1.86301 * 109.46888 * 150.00061 * 4 3 2 7 7 S 1.70618 * 110.95041 * 179.70398 * 3 2 1 8 8 C 1.75838 * 91.56364 * 0.35461 * 7 3 2 9 9 C 1.46582 * 125.45725 * 179.90971 * 8 7 3 10 10 O 1.21703 * 119.99792 * 179.69293 * 9 8 7 11 11 N 1.34776 * 120.00339 * 359.69674 * 9 8 7 12 12 C 1.46495 * 120.00079 * 179.97438 * 11 9 8 13 13 C 1.53009 * 109.46987 * 182.99668 * 12 11 9 14 14 C 1.50703 * 112.90343 * 305.68791 * 13 12 11 15 15 C 1.38237 * 119.99358 * 102.17356 * 14 13 12 16 16 C 1.38237 * 119.99587 * 179.76292 * 15 14 13 17 17 C 1.38228 * 119.99935 * 0.48350 * 16 15 14 18 18 C 1.38237 * 120.00334 * 359.79095 * 17 16 15 19 19 C 1.38226 * 120.00391 * 282.44078 * 14 13 12 20 20 C 1.53780 * 113.61432 * 174.44162 * 13 12 11 21 21 C 1.53780 * 87.17157 * 270.84392 * 20 13 12 22 22 H 1.08997 * 113.62231 * 89.15925 * 21 20 13 23 23 F 1.39902 * 113.61101 * 220.06440 * 21 20 13 24 24 C 1.53775 * 113.61300 * 76.94417 * 13 12 11 25 25 C 1.36648 * 109.08142 * 359.64951 * 8 7 3 26 26 H 1.09007 * 109.47107 * 270.00067 * 1 2 3 27 27 H 1.09002 * 109.47276 * 29.99707 * 1 2 3 28 28 H 1.08998 * 109.47542 * 149.99648 * 1 2 3 29 29 H 1.09001 * 109.47239 * 269.99762 * 4 3 2 30 30 H 0.96692 * 114.00204 * 60.00367 * 5 4 3 31 31 H 1.48498 * 110.00125 * 58.68002 * 6 4 3 32 32 H 1.48504 * 110.00179 * 179.97438 * 6 4 3 33 33 H 0.97009 * 119.99592 * 359.97438 * 11 9 8 34 34 H 1.09003 * 109.46947 * 62.99621 * 12 11 9 35 35 H 1.09002 * 109.47617 * 302.99467 * 12 11 9 36 36 H 1.07998 * 120.00085 * 359.97438 * 15 14 13 37 37 H 1.08003 * 120.00156 * 180.25325 * 16 15 14 38 38 H 1.08006 * 120.00260 * 179.76429 * 17 16 15 39 39 H 1.07994 * 120.00263 * 179.97438 * 18 17 16 40 40 H 1.08000 * 120.00093 * 0.02562 * 19 14 13 41 41 H 1.09000 * 113.61251 * 25.42701 * 20 13 12 42 42 H 1.08997 * 113.61578 * 156.24946 * 20 13 12 43 43 H 1.09006 * 113.60828 * 203.66600 * 24 13 12 44 44 H 1.08998 * 113.61743 * 334.47818 * 24 13 12 45 45 H 1.07999 * 123.34867 * 180.27840 * 25 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2250 1.1293 0.0000 4 6 1.6355 2.5161 -0.0011 5 8 0.3748 2.4984 0.6715 6 14 2.7918 3.6831 0.8774 7 16 3.8969 0.7893 0.0082 8 6 3.5936 -0.9428 0.0008 9 6 4.6231 -1.9863 0.0013 10 8 4.3001 -3.1596 0.0014 11 7 5.9273 -1.6463 0.0016 12 6 6.9561 -2.6893 0.0026 13 6 8.3398 -2.0406 0.0782 14 6 8.5683 -1.0183 -1.0053 15 6 8.4750 0.3298 -0.7142 16 6 8.6894 1.2676 -1.7069 17 6 8.9872 0.8572 -2.9928 18 6 9.0750 -0.4911 -3.2852 19 6 8.8657 -1.4288 -2.2913 20 6 9.4880 -3.0535 0.2214 21 6 9.2956 -2.9411 1.7430 22 1 8.5718 -3.6498 2.1453 23 9 10.4969 -2.9237 2.4599 24 6 8.7099 -1.5410 1.4846 25 6 2.2446 -1.1601 0.0005 26 1 -0.3634 0.0000 1.0277 27 1 -0.3634 0.8900 -0.5138 28 1 -0.3634 -0.8899 -0.5139 29 1 1.4941 2.8500 -1.0291 30 1 0.4249 2.2105 1.5932 31 1 4.1165 3.6865 0.2064 32 1 2.2222 5.0545 0.8826 33 1 6.1847 -0.7110 0.0011 34 1 6.8793 -3.2761 -0.9128 35 1 6.8125 -3.3405 0.8648 36 1 8.2379 0.6504 0.2895 37 1 8.6205 2.3210 -1.4786 38 1 9.1510 1.5898 -3.7693 39 1 9.3073 -0.8118 -4.2899 40 1 8.9340 -2.4821 -2.5197 41 1 9.2518 -4.0403 -0.1767 42 1 10.4494 -2.6758 -0.1263 43 1 9.4590 -0.7491 1.4835 44 1 7.8458 -1.3053 2.1057 45 1 1.8019 -2.1452 0.0008 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13458982_6739946.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:30:30 Heat of formation + Delta-G solvation = -35.109309 kcal Electronic energy + Delta-G solvation = -30068.797783 eV Core-core repulsion = 25866.338989 eV Total energy + Delta-G solvation = -4202.458795 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.114 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -48.55133 -41.76385 -40.59558 -39.76215 -38.86620 -37.38221 -35.39625 -32.34996 -32.04309 -31.99889 -30.28272 -29.00844 -27.28896 -26.24078 -25.08340 -24.17710 -23.35618 -22.66312 -21.72885 -20.49456 -19.98625 -19.21568 -18.48100 -17.81462 -17.55792 -17.28089 -16.90489 -16.68337 -16.50245 -16.28583 -16.09601 -15.84089 -15.60356 -15.53101 -15.25114 -14.78523 -14.70524 -14.51318 -14.40727 -14.33684 -14.01239 -13.77289 -13.69583 -13.50649 -13.46890 -13.12024 -12.98713 -12.63923 -12.53939 -12.47384 -12.33407 -12.27535 -11.95553 -11.79577 -11.46064 -11.39899 -11.11107 -10.76325 -10.25947 -9.95597 -9.78271 -9.70472 -9.47394 -5.23445 -0.64730 0.25259 0.27836 0.36008 0.67700 1.04059 1.30433 1.41605 1.78622 1.93141 2.16405 2.69835 2.98364 3.08793 3.20015 3.28774 3.38131 3.47908 3.51998 3.72413 3.77018 3.94826 3.96875 4.05649 4.07929 4.13577 4.22130 4.38530 4.39258 4.44875 4.50252 4.52191 4.55097 4.55467 4.58228 4.68263 4.77908 4.78873 4.84784 4.95087 4.99154 5.01606 5.13684 5.21471 5.36577 5.43567 5.44203 5.49559 5.51753 5.94569 6.30221 6.34120 7.05570 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.096 4.096 2 C -0.090 4.090 3 C -0.236 4.236 4 C -0.027 4.027 5 O -0.529 6.529 6 Si 0.657 3.343 7 S 0.193 5.807 8 C -0.262 4.262 9 C 0.593 3.407 10 O -0.525 6.525 11 N -0.723 5.723 12 C 0.147 3.853 13 C -0.057 4.057 14 C -0.070 4.070 15 C -0.122 4.122 16 C -0.114 4.114 17 C -0.119 4.119 18 C -0.114 4.114 19 C -0.108 4.108 20 C -0.140 4.140 21 C 0.065 3.935 22 H 0.113 0.887 23 F -0.203 7.203 24 C -0.152 4.152 25 C -0.045 4.045 26 H 0.073 0.927 27 H 0.085 0.915 28 H 0.062 0.938 29 H 0.124 0.876 30 H 0.381 0.619 31 H -0.236 1.236 32 H -0.233 1.233 33 H 0.400 0.600 34 H 0.079 0.921 35 H 0.082 0.918 36 H 0.123 0.877 37 H 0.124 0.876 38 H 0.123 0.877 39 H 0.124 0.876 40 H 0.123 0.877 41 H 0.088 0.912 42 H 0.104 0.896 43 H 0.103 0.897 44 H 0.085 0.915 45 H 0.156 0.844 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.473 2.892 1.081 3.124 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.154 4.154 2 C -0.103 4.103 3 C -0.355 4.355 4 C -0.140 4.140 5 O -0.335 6.335 6 Si 0.557 3.443 7 S 0.461 5.539 8 C -0.382 4.382 9 C 0.379 3.621 10 O -0.402 6.402 11 N -0.376 5.376 12 C 0.024 3.976 13 C -0.058 4.058 14 C -0.070 4.070 15 C -0.140 4.140 16 C -0.132 4.132 17 C -0.137 4.137 18 C -0.132 4.132 19 C -0.126 4.126 20 C -0.178 4.178 21 C 0.029 3.971 22 H 0.130 0.870 23 F -0.184 7.184 24 C -0.190 4.190 25 C -0.079 4.079 26 H 0.091 0.909 27 H 0.103 0.897 28 H 0.081 0.919 29 H 0.141 0.859 30 H 0.229 0.771 31 H -0.161 1.161 32 H -0.157 1.157 33 H 0.235 0.765 34 H 0.097 0.903 35 H 0.100 0.900 36 H 0.141 0.859 37 H 0.142 0.858 38 H 0.141 0.859 39 H 0.142 0.858 40 H 0.141 0.859 41 H 0.107 0.893 42 H 0.122 0.878 43 H 0.121 0.879 44 H 0.104 0.896 45 H 0.173 0.827 Dipole moment (debyes) X Y Z Total from point charges 1.919 3.880 0.470 4.354 hybrid contribution -1.216 -0.674 -0.624 1.524 sum 0.703 3.207 -0.154 3.286 Atomic orbital electron populations 1.20648 0.88488 1.03399 1.02893 1.18721 0.98475 0.90454 1.02659 1.24474 0.98363 1.00962 1.11750 1.24461 0.92218 0.95295 1.02037 1.86530 1.27639 1.90061 1.29253 0.94838 0.78267 0.80814 0.90417 1.83060 1.03329 0.98402 1.69136 1.24539 0.97972 0.96977 1.18746 1.16910 0.81444 0.87458 0.76277 1.90865 1.81599 1.18105 1.49654 1.45766 1.05236 1.10458 1.76120 1.21169 0.83450 0.89499 1.03503 1.20785 0.94807 0.96013 0.94170 1.19396 1.00465 0.93293 0.93828 1.21050 1.01112 0.92306 0.99554 1.21176 0.99262 0.99648 0.93158 1.21237 0.99525 0.96090 0.96861 1.21204 0.99446 0.93187 0.99383 1.20984 0.99477 0.99862 0.92285 1.23653 0.98970 1.00005 0.95167 1.23116 0.83765 0.99082 0.91109 0.86955 1.92831 1.47974 1.97492 1.80091 1.23809 1.02377 0.97640 0.95134 1.20744 0.90862 1.00194 0.96050 0.90875 0.89674 0.91910 0.85878 0.77095 1.16084 1.15666 0.76514 0.90258 0.90024 0.85927 0.85816 0.85931 0.85830 0.85928 0.89304 0.87790 0.87865 0.89587 0.82672 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 0.09 8.67 36.01 0.31 0.40 16 2 C -0.09 -0.02 5.75 -106.45 -0.61 -0.63 16 3 C -0.24 0.12 5.54 -35.86 -0.20 -0.08 16 4 C -0.03 0.04 2.76 36.00 0.10 0.14 16 5 O -0.53 0.85 9.85 -35.23 -0.35 0.51 16 6 Si 0.66 -1.41 31.31 -169.99 -5.32 -6.73 16 7 S 0.19 -0.12 19.78 -107.50 -2.13 -2.25 16 8 C -0.26 -0.39 6.45 -36.79 -0.24 -0.63 16 9 C 0.59 1.61 7.78 -12.90 -0.10 1.51 16 10 O -0.52 -3.17 16.84 5.19 0.09 -3.09 16 11 N -0.72 -0.07 5.35 -61.65 -0.33 -0.40 16 12 C 0.15 -0.13 4.96 -4.04 -0.02 -0.15 16 13 C -0.06 0.12 0.73 -154.85 -0.11 0.00 16 14 C -0.07 0.07 4.23 -104.63 -0.44 -0.37 16 15 C -0.12 0.15 8.10 -39.58 -0.32 -0.17 16 16 C -0.11 0.10 10.05 -39.59 -0.40 -0.30 16 17 C -0.12 0.06 10.05 -39.59 -0.40 -0.34 16 18 C -0.11 0.05 10.05 -39.58 -0.40 -0.35 16 19 C -0.11 0.06 9.38 -39.59 -0.37 -0.31 16 20 C -0.14 0.29 6.74 -25.92 -0.17 0.11 16 21 C 0.07 -0.08 5.33 -25.83 -0.14 -0.22 16 22 H 0.11 -0.30 7.62 -51.93 -0.40 -0.69 16 23 F -0.20 -0.40 17.41 2.25 0.04 -0.36 16 24 C -0.15 0.33 6.10 -25.83 -0.16 0.17 16 25 C -0.05 -0.06 9.80 -40.44 -0.40 -0.46 16 26 H 0.07 -0.15 8.14 -51.93 -0.42 -0.57 16 27 H 0.08 -0.02 6.41 -51.93 -0.33 -0.35 16 28 H 0.06 -0.06 8.13 -51.93 -0.42 -0.48 16 29 H 0.12 -0.14 7.96 -51.93 -0.41 -0.56 16 30 H 0.38 -1.88 8.66 45.56 0.39 -1.49 16 31 H -0.24 0.14 7.09 56.52 0.40 0.54 16 32 H -0.23 -0.16 7.11 56.52 0.40 0.25 16 33 H 0.40 -0.47 6.23 -40.82 -0.25 -0.72 16 34 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 35 H 0.08 -0.08 7.32 -51.93 -0.38 -0.46 16 36 H 0.12 -0.34 7.06 -52.49 -0.37 -0.71 16 37 H 0.12 -0.29 8.06 -52.48 -0.42 -0.71 16 38 H 0.12 -0.23 8.06 -52.48 -0.42 -0.65 16 39 H 0.12 -0.21 8.06 -52.49 -0.42 -0.63 16 40 H 0.12 -0.20 8.02 -52.49 -0.42 -0.62 16 41 H 0.09 -0.27 8.10 -51.93 -0.42 -0.69 16 42 H 0.10 -0.15 8.09 -51.93 -0.42 -0.57 16 43 H 0.10 -0.19 7.48 -51.93 -0.39 -0.58 16 44 H 0.09 -0.24 8.10 -51.93 -0.42 -0.66 16 45 H 0.16 0.20 8.06 -52.49 -0.42 -0.23 16 LS Contribution 384.91 15.07 5.80 5.80 Total: 0.00 -6.97 384.91 -12.24 -19.21 By element: Atomic # 1 Polarization: -5.04 SS G_CDS: -5.98 Total: -11.02 kcal Atomic # 6 Polarization: 2.40 SS G_CDS: -4.06 Total: -1.66 kcal Atomic # 7 Polarization: -0.07 SS G_CDS: -0.33 Total: -0.40 kcal Atomic # 8 Polarization: -2.32 SS G_CDS: -0.26 Total: -2.58 kcal Atomic # 9 Polarization: -0.40 SS G_CDS: 0.04 Total: -0.36 kcal Atomic # 14 Polarization: -1.41 SS G_CDS: -5.32 Total: -6.73 kcal Atomic # 16 Polarization: -0.12 SS G_CDS: -2.13 Total: -2.25 kcal Total LS contribution 5.80 Total: 5.80 kcal Total: -6.97 -12.24 -19.21 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13458982_6739946.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -15.898 kcal (2) G-P(sol) polarization free energy of solvation -6.969 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -22.868 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.242 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.211 kcal (6) G-S(sol) free energy of system = (1) + (5) -35.109 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds