Wall clock time and date at job start Sat Mar 6 2021 21:30:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.33819 * 122.44649 * 2 1 4 4 C 1.50693 * 124.52427 * 359.94697 * 3 2 1 5 5 O 1.42895 * 109.47161 * 30.00075 * 4 3 2 6 6 Si 1.86301 * 109.46888 * 150.00061 * 4 3 2 7 7 S 1.70618 * 110.95041 * 179.70398 * 3 2 1 8 8 C 1.75838 * 91.56364 * 0.35461 * 7 3 2 9 9 C 1.46582 * 125.45725 * 179.90971 * 8 7 3 10 10 O 1.21703 * 119.99792 * 179.69293 * 9 8 7 11 11 N 1.34776 * 120.00339 * 359.69674 * 9 8 7 12 12 C 1.46495 * 120.00079 * 179.97438 * 11 9 8 13 13 C 1.53009 * 109.46987 * 182.99668 * 12 11 9 14 14 C 1.50703 * 112.90343 * 305.68791 * 13 12 11 15 15 C 1.38237 * 119.99358 * 102.17356 * 14 13 12 16 16 C 1.38237 * 119.99587 * 179.76292 * 15 14 13 17 17 C 1.38228 * 119.99935 * 0.48350 * 16 15 14 18 18 C 1.38237 * 120.00334 * 359.79095 * 17 16 15 19 19 C 1.38226 * 120.00391 * 282.44078 * 14 13 12 20 20 C 1.53780 * 113.61432 * 174.44162 * 13 12 11 21 21 C 1.53780 * 87.17157 * 270.84392 * 20 13 12 22 22 H 1.08997 * 113.62231 * 89.15925 * 21 20 13 23 23 F 1.39902 * 113.61101 * 220.06440 * 21 20 13 24 24 C 1.53775 * 113.61300 * 76.94417 * 13 12 11 25 25 C 1.36648 * 109.08142 * 359.64951 * 8 7 3 26 26 H 1.09007 * 109.47107 * 270.00067 * 1 2 3 27 27 H 1.09002 * 109.47276 * 29.99707 * 1 2 3 28 28 H 1.08998 * 109.47542 * 149.99648 * 1 2 3 29 29 H 1.09001 * 109.47239 * 269.99762 * 4 3 2 30 30 H 0.96692 * 114.00204 * 60.00367 * 5 4 3 31 31 H 1.48498 * 110.00125 * 58.68002 * 6 4 3 32 32 H 1.48504 * 110.00179 * 179.97438 * 6 4 3 33 33 H 0.97009 * 119.99592 * 359.97438 * 11 9 8 34 34 H 1.09003 * 109.46947 * 62.99621 * 12 11 9 35 35 H 1.09002 * 109.47617 * 302.99467 * 12 11 9 36 36 H 1.07998 * 120.00085 * 359.97438 * 15 14 13 37 37 H 1.08003 * 120.00156 * 180.25325 * 16 15 14 38 38 H 1.08006 * 120.00260 * 179.76429 * 17 16 15 39 39 H 1.07994 * 120.00263 * 179.97438 * 18 17 16 40 40 H 1.08000 * 120.00093 * 0.02562 * 19 14 13 41 41 H 1.09000 * 113.61251 * 25.42701 * 20 13 12 42 42 H 1.08997 * 113.61578 * 156.24946 * 20 13 12 43 43 H 1.09006 * 113.60828 * 203.66600 * 24 13 12 44 44 H 1.08998 * 113.61743 * 334.47818 * 24 13 12 45 45 H 1.07999 * 123.34867 * 180.27840 * 25 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2250 1.1293 0.0000 4 6 1.6355 2.5161 -0.0011 5 8 0.3748 2.4984 0.6715 6 14 2.7918 3.6831 0.8774 7 16 3.8969 0.7893 0.0082 8 6 3.5936 -0.9428 0.0008 9 6 4.6231 -1.9863 0.0013 10 8 4.3001 -3.1596 0.0014 11 7 5.9273 -1.6463 0.0016 12 6 6.9561 -2.6893 0.0026 13 6 8.3398 -2.0406 0.0782 14 6 8.5683 -1.0183 -1.0053 15 6 8.4750 0.3298 -0.7142 16 6 8.6894 1.2676 -1.7069 17 6 8.9872 0.8572 -2.9928 18 6 9.0750 -0.4911 -3.2852 19 6 8.8657 -1.4288 -2.2913 20 6 9.4880 -3.0535 0.2214 21 6 9.2956 -2.9411 1.7430 22 1 8.5718 -3.6498 2.1453 23 9 10.4969 -2.9237 2.4599 24 6 8.7099 -1.5410 1.4846 25 6 2.2446 -1.1601 0.0005 26 1 -0.3634 0.0000 1.0277 27 1 -0.3634 0.8900 -0.5138 28 1 -0.3634 -0.8899 -0.5139 29 1 1.4941 2.8500 -1.0291 30 1 0.4249 2.2105 1.5932 31 1 4.1165 3.6865 0.2064 32 1 2.2222 5.0545 0.8826 33 1 6.1847 -0.7110 0.0011 34 1 6.8793 -3.2761 -0.9128 35 1 6.8125 -3.3405 0.8648 36 1 8.2379 0.6504 0.2895 37 1 8.6205 2.3210 -1.4786 38 1 9.1510 1.5898 -3.7693 39 1 9.3073 -0.8118 -4.2899 40 1 8.9340 -2.4821 -2.5197 41 1 9.2518 -4.0403 -0.1767 42 1 10.4494 -2.6758 -0.1263 43 1 9.4590 -0.7491 1.4835 44 1 7.8458 -1.3053 2.1057 45 1 1.8019 -2.1452 0.0008 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13458982_6739946.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:30:29 Heat of formation + Delta-G solvation = -28.766936 kcal Electronic energy + Delta-G solvation = -30068.522757 eV Core-core repulsion = 25866.338989 eV Total energy + Delta-G solvation = -4202.183769 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.114 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -48.57924 -41.72137 -40.65063 -39.76645 -38.77306 -37.30152 -35.51147 -32.33743 -31.95922 -31.88676 -30.21773 -28.99134 -27.14447 -26.19958 -25.00681 -24.16664 -23.24800 -22.56277 -21.82455 -20.45565 -19.93629 -19.19588 -18.41288 -17.74950 -17.46867 -17.29561 -16.92730 -16.62572 -16.47386 -16.24983 -16.10818 -15.80350 -15.54264 -15.49130 -15.25313 -14.74765 -14.67397 -14.50345 -14.33141 -14.29023 -13.95870 -13.70667 -13.59978 -13.47049 -13.36219 -13.10133 -12.95822 -12.55334 -12.44912 -12.41990 -12.26113 -12.21421 -11.85094 -11.77390 -11.39042 -11.31623 -11.23299 -10.67967 -10.34622 -9.86092 -9.70380 -9.68501 -9.44287 -5.07778 -0.69374 0.25020 0.37068 0.45456 0.67984 1.09956 1.31240 1.53560 1.88803 1.89029 2.03529 2.79139 3.11033 3.20590 3.36169 3.41614 3.48989 3.57386 3.61289 3.73363 3.86739 4.08399 4.08936 4.10074 4.18730 4.25398 4.27217 4.43965 4.46123 4.54656 4.59354 4.63374 4.65416 4.66903 4.70731 4.81752 4.84282 4.90934 4.91503 5.01869 5.06513 5.11302 5.17770 5.26323 5.38566 5.48238 5.54620 5.59665 5.61296 6.06039 6.23870 6.66788 6.93215 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.092 4.092 2 C -0.099 4.099 3 C -0.233 4.233 4 C -0.031 4.031 5 O -0.539 6.539 6 Si 0.727 3.273 7 S 0.228 5.772 8 C -0.284 4.284 9 C 0.591 3.409 10 O -0.567 6.567 11 N -0.712 5.712 12 C 0.146 3.854 13 C -0.045 4.045 14 C -0.074 4.074 15 C -0.127 4.127 16 C -0.123 4.123 17 C -0.132 4.132 18 C -0.128 4.128 19 C -0.120 4.120 20 C -0.137 4.137 21 C 0.056 3.944 22 H 0.126 0.874 23 F -0.223 7.223 24 C -0.146 4.146 25 C -0.053 4.053 26 H 0.086 0.914 27 H 0.080 0.920 28 H 0.060 0.940 29 H 0.122 0.878 30 H 0.396 0.604 31 H -0.253 1.253 32 H -0.272 1.272 33 H 0.407 0.593 34 H 0.073 0.927 35 H 0.085 0.915 36 H 0.139 0.861 37 H 0.138 0.862 38 H 0.132 0.868 39 H 0.131 0.869 40 H 0.128 0.872 41 H 0.098 0.902 42 H 0.098 0.902 43 H 0.103 0.897 44 H 0.095 0.905 45 H 0.149 0.851 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.462 3.818 1.569 4.154 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.151 4.151 2 C -0.111 4.111 3 C -0.353 4.353 4 C -0.143 4.143 5 O -0.347 6.347 6 Si 0.629 3.371 7 S 0.497 5.503 8 C -0.404 4.404 9 C 0.378 3.622 10 O -0.448 6.448 11 N -0.363 5.363 12 C 0.023 3.977 13 C -0.046 4.046 14 C -0.075 4.075 15 C -0.145 4.145 16 C -0.141 4.141 17 C -0.150 4.150 18 C -0.146 4.146 19 C -0.138 4.138 20 C -0.175 4.175 21 C 0.020 3.980 22 H 0.144 0.856 23 F -0.204 7.204 24 C -0.184 4.184 25 C -0.087 4.087 26 H 0.104 0.896 27 H 0.098 0.902 28 H 0.079 0.921 29 H 0.139 0.861 30 H 0.246 0.754 31 H -0.179 1.179 32 H -0.198 1.198 33 H 0.243 0.757 34 H 0.091 0.909 35 H 0.103 0.897 36 H 0.156 0.844 37 H 0.156 0.844 38 H 0.150 0.850 39 H 0.149 0.851 40 H 0.146 0.854 41 H 0.117 0.883 42 H 0.117 0.883 43 H 0.121 0.879 44 H 0.114 0.886 45 H 0.166 0.834 Dipole moment (debyes) X Y Z Total from point charges 1.928 4.811 0.967 5.272 hybrid contribution -1.222 -0.891 -0.804 1.713 sum 0.706 3.920 0.163 3.987 Atomic orbital electron populations 1.20634 0.87795 1.02994 1.03629 1.18779 0.99015 0.90198 1.03105 1.24679 0.98587 1.01288 1.10705 1.24592 0.92638 0.94781 1.02320 1.86506 1.27479 1.90093 1.30577 0.94023 0.76060 0.77854 0.89139 1.82874 1.02875 0.96303 1.68279 1.24541 0.97815 0.98150 1.19898 1.17121 0.82241 0.87145 0.75716 1.90835 1.82290 1.19734 1.51905 1.45712 1.04684 1.11077 1.74851 1.21223 0.83710 0.89410 1.03366 1.20611 0.94030 0.95790 0.94143 1.19501 1.00443 0.93683 0.93833 1.21279 1.00747 0.92168 1.00311 1.21425 0.99034 1.00544 0.93097 1.21462 0.99671 0.96322 0.97505 1.21404 0.99765 0.93498 0.99929 1.21161 0.99748 1.00282 0.92645 1.23627 0.98611 1.00519 0.94714 1.23385 0.83221 1.00081 0.91279 0.85636 1.92789 1.49332 1.97624 1.80622 1.23788 1.02588 0.97155 0.94867 1.20823 0.91152 1.00441 0.96294 0.89592 0.90172 0.92129 0.86112 0.75361 1.17858 1.19802 0.75675 0.90919 0.89681 0.84360 0.84440 0.85012 0.85114 0.85395 0.88328 0.88339 0.87899 0.88626 0.83381 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 0.18 8.67 71.24 0.62 0.80 16 2 C -0.10 -0.03 5.75 -21.05 -0.12 -0.15 16 3 C -0.23 0.38 5.54 24.68 0.14 0.52 16 4 C -0.03 0.11 2.76 71.23 0.20 0.31 16 5 O -0.54 2.22 9.85 -148.98 -1.47 0.75 16 6 Si 0.73 -3.71 31.31 68.60 2.15 -1.56 16 7 S 0.23 -0.45 19.78 -56.49 -1.12 -1.56 16 8 C -0.28 -0.97 6.45 24.08 0.16 -0.81 16 9 C 0.59 3.67 7.78 86.42 0.67 4.34 16 10 O -0.57 -7.72 16.84 -4.36 -0.07 -7.79 16 11 N -0.71 -0.22 5.35 -467.16 -2.50 -2.72 16 12 C 0.15 -0.22 4.96 86.38 0.43 0.21 16 13 C -0.05 0.19 0.73 -52.40 -0.04 0.15 16 14 C -0.07 0.17 4.23 -19.87 -0.08 0.08 16 15 C -0.13 0.39 8.10 22.27 0.18 0.57 16 16 C -0.12 0.28 10.05 22.27 0.22 0.50 16 17 C -0.13 0.14 10.05 22.27 0.22 0.36 16 18 C -0.13 0.06 10.05 22.27 0.22 0.28 16 19 C -0.12 0.10 9.38 22.27 0.21 0.31 16 20 C -0.14 0.56 6.74 31.12 0.21 0.77 16 21 C 0.06 -0.15 5.33 31.18 0.17 0.01 16 22 H 0.13 -0.71 7.62 -2.39 -0.02 -0.73 16 23 F -0.22 -0.94 17.41 44.97 0.78 -0.15 16 24 C -0.15 0.71 6.10 31.18 0.19 0.90 16 25 C -0.05 -0.18 9.80 21.72 0.21 0.03 16 26 H 0.09 -0.41 8.14 -2.38 -0.02 -0.43 16 27 H 0.08 -0.06 6.41 -2.39 -0.02 -0.07 16 28 H 0.06 -0.09 8.13 -2.39 -0.02 -0.11 16 29 H 0.12 -0.36 7.96 -2.39 -0.02 -0.38 16 30 H 0.40 -4.42 8.66 -74.06 -0.64 -5.06 16 31 H -0.25 0.59 7.09 99.48 0.71 1.29 16 32 H -0.27 -0.41 7.11 99.48 0.71 0.30 16 33 H 0.41 -1.13 6.23 -92.70 -0.58 -1.71 16 34 H 0.07 0.02 8.14 -2.39 -0.02 0.00 16 35 H 0.09 -0.16 7.32 -2.39 -0.02 -0.17 16 36 H 0.14 -0.95 7.06 -2.91 -0.02 -0.97 16 37 H 0.14 -0.78 8.06 -2.91 -0.02 -0.80 16 38 H 0.13 -0.50 8.06 -2.91 -0.02 -0.52 16 39 H 0.13 -0.38 8.06 -2.91 -0.02 -0.40 16 40 H 0.13 -0.35 8.02 -2.91 -0.02 -0.37 16 41 H 0.10 -0.60 8.10 -2.39 -0.02 -0.62 16 42 H 0.10 -0.25 8.09 -2.39 -0.02 -0.27 16 43 H 0.10 -0.45 7.48 -2.38 -0.02 -0.47 16 44 H 0.10 -0.64 8.10 -2.39 -0.02 -0.65 16 45 H 0.15 0.62 8.06 -2.91 -0.02 0.60 16 Total: 0.00 -16.82 384.91 1.43 -15.39 By element: Atomic # 1 Polarization: -11.42 SS G_CDS: -0.15 Total: -11.56 kcal Atomic # 6 Polarization: 5.40 SS G_CDS: 3.80 Total: 9.20 kcal Atomic # 7 Polarization: -0.22 SS G_CDS: -2.50 Total: -2.72 kcal Atomic # 8 Polarization: -5.50 SS G_CDS: -1.54 Total: -7.04 kcal Atomic # 9 Polarization: -0.94 SS G_CDS: 0.78 Total: -0.15 kcal Atomic # 14 Polarization: -3.71 SS G_CDS: 2.15 Total: -1.56 kcal Atomic # 16 Polarization: -0.45 SS G_CDS: -1.12 Total: -1.56 kcal Total: -16.82 1.43 -15.39 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13458982_6739946.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -13.373 kcal (2) G-P(sol) polarization free energy of solvation -16.823 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -30.196 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.429 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.394 kcal (6) G-S(sol) free energy of system = (1) + (5) -28.767 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds