Wall clock time and date at job start Sat Mar 6 2021 21:30:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86295 * 109.47160 * 2 1 4 4 C 1.50700 * 109.46936 * 240.00287 * 2 1 3 5 5 C 1.32780 * 124.71025 * 300.31267 * 4 2 1 6 6 C 1.44424 * 113.07981 * 180.14627 * 5 4 2 7 7 C 1.47195 * 123.45721 * 179.81158 * 6 5 4 8 8 O 1.21636 * 120.00033 * 359.72822 * 7 6 5 9 9 N 1.34780 * 119.99798 * 179.73212 * 7 6 5 10 10 C 1.46500 * 119.99631 * 179.97438 * 9 7 6 11 11 C 1.53006 * 109.46766 * 184.19371 * 10 9 7 12 12 C 1.50705 * 112.84912 * 294.89159 * 11 10 9 13 13 C 1.38227 * 120.00153 * 113.63704 * 12 11 10 14 14 C 1.38235 * 120.00378 * 179.78797 * 13 12 11 15 15 C 1.38239 * 119.99399 * 0.45595 * 14 13 12 16 16 C 1.38238 * 120.00196 * 359.77916 * 15 14 13 17 17 C 1.38233 * 119.99523 * 293.90944 * 12 11 10 18 18 C 1.53777 * 113.61118 * 163.69377 * 11 10 9 19 19 C 1.54052 * 86.98540 * 270.83736 * 18 11 10 20 20 H 1.09004 * 113.68522 * 89.13203 * 19 18 11 21 21 F 1.39902 * 113.61963 * 220.02030 * 19 18 11 22 22 C 1.53778 * 87.07750 * 334.56957 * 19 18 11 23 23 C 1.36005 * 113.07924 * 359.54046 * 6 5 4 24 24 S 1.70439 * 110.81984 * 0.24713 * 23 6 5 25 25 H 0.96703 * 114.00104 * 60.00090 * 1 2 3 26 26 H 1.09001 * 109.46898 * 120.00276 * 2 1 3 27 27 H 1.48504 * 110.00380 * 298.68155 * 3 2 1 28 28 H 1.48500 * 110.00069 * 60.00195 * 3 2 1 29 29 H 1.07997 * 123.45751 * 359.93232 * 5 4 2 30 30 H 0.97001 * 120.00044 * 359.97438 * 9 7 6 31 31 H 1.09002 * 109.47028 * 64.19757 * 10 9 7 32 32 H 1.08996 * 109.47075 * 304.19518 * 10 9 7 33 33 H 1.08009 * 119.99958 * 359.97438 * 13 12 11 34 34 H 1.07993 * 120.00293 * 180.25624 * 14 13 12 35 35 H 1.08003 * 119.99776 * 179.79207 * 15 14 13 36 36 H 1.08002 * 119.99936 * 179.97438 * 16 15 14 37 37 H 1.08002 * 120.00374 * 359.97438 * 17 12 11 38 38 H 1.09002 * 113.61506 * 25.43331 * 18 11 10 39 39 H 1.09000 * 113.61371 * 156.33759 * 18 11 10 40 40 H 1.08997 * 113.61685 * 270.88049 * 22 19 18 41 41 H 1.09003 * 113.61415 * 139.97024 * 22 19 18 42 42 H 1.07998 * 124.59203 * 180.24466 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 1.6639 -1.9746 -1.5358 6 6 2.2767 -2.4002 -2.7724 7 6 2.1334 -3.7574 -3.3240 8 8 1.4748 -4.5892 -2.7293 9 7 2.7321 -4.0782 -4.4882 10 6 2.5900 -5.4291 -5.0369 11 6 3.4451 -5.5594 -6.2990 12 6 2.9741 -4.6685 -7.4196 13 6 3.7681 -3.6226 -7.8512 14 6 3.3381 -2.8080 -8.8820 15 6 2.1098 -3.0338 -9.4748 16 6 1.3137 -4.0769 -9.0399 17 6 1.7457 -4.8940 -8.0119 18 6 3.6888 -7.0152 -6.7303 19 6 4.9346 -6.9895 -5.8245 20 1 4.7340 -7.2876 -4.7954 21 9 6.0411 -7.6457 -6.3743 22 6 4.9566 -5.4658 -6.0313 23 6 2.9948 -1.4166 -3.3777 24 16 2.9440 0.0208 -2.4633 25 1 -0.3933 0.4417 -0.7651 26 1 1.7923 -0.5139 0.8900 27 1 1.5879 2.4586 -1.2242 28 1 1.5615 2.4678 1.2085 29 1 1.0538 -2.6194 -0.9207 30 1 3.2570 -3.4147 -4.9626 31 1 1.5446 -5.6120 -5.2859 32 1 2.9203 -6.1583 -4.2972 33 1 4.7258 -3.4435 -7.3851 34 1 3.9602 -1.9934 -9.2220 35 1 1.7723 -2.3954 -10.2779 36 1 0.3539 -4.2530 -9.5027 37 1 1.1236 -5.7088 -7.6720 38 1 2.9159 -7.7058 -6.3927 39 1 3.9214 -7.1237 -7.7896 40 1 5.5351 -5.1514 -6.8999 41 1 5.2064 -4.9063 -5.1298 42 1 3.5255 -1.5308 -4.3114 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_13458982_6894386.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:30:33 Heat of formation + Delta-G solvation = -30.800809 kcal Electronic energy + Delta-G solvation = -27725.238897 eV Core-core repulsion = 23678.504551 eV Total energy + Delta-G solvation = -4046.734345 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 348.098 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -48.55821 -41.78421 -40.58624 -39.04870 -38.71242 -37.16352 -35.36750 -32.27565 -31.99519 -31.86072 -28.79902 -27.29023 -27.00687 -25.72440 -24.63512 -23.36142 -22.64574 -22.00861 -20.71089 -19.94619 -19.03037 -18.48355 -18.09095 -17.78934 -17.50227 -16.79679 -16.68046 -16.46730 -16.18521 -16.02694 -15.85059 -15.57646 -15.56631 -15.20028 -14.74941 -14.56808 -14.45272 -14.37752 -14.06329 -13.81338 -13.70013 -13.63301 -13.57256 -13.33721 -12.72086 -12.60454 -12.56872 -12.41896 -12.33094 -11.92755 -11.85828 -11.45438 -11.41124 -10.97903 -10.78488 -10.21604 -10.02842 -9.95487 -9.77583 -9.53892 -5.15734 -0.40077 0.27916 0.30220 0.36151 0.65072 0.87270 1.15268 1.48212 1.83441 1.99491 2.34092 2.69527 2.98260 3.09810 3.21117 3.27849 3.39288 3.47490 3.52616 3.74533 3.80482 3.91046 3.94893 3.97567 4.06573 4.13070 4.24739 4.37657 4.42872 4.46180 4.48974 4.51262 4.54010 4.59826 4.66916 4.69064 4.81432 4.94752 4.99055 5.00828 5.12832 5.17858 5.28989 5.44115 5.50270 5.51776 5.94639 6.26496 6.38546 7.16213 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.522 6.522 2 C -0.032 4.032 3 Si 0.650 3.350 4 C -0.242 4.242 5 C -0.053 4.053 6 C -0.155 4.155 7 C 0.579 3.421 8 O -0.531 6.531 9 N -0.722 5.722 10 C 0.147 3.853 11 C -0.056 4.056 12 C -0.069 4.069 13 C -0.120 4.120 14 C -0.116 4.116 15 C -0.120 4.120 16 C -0.115 4.115 17 C -0.109 4.109 18 C -0.139 4.139 19 C 0.065 3.935 20 H 0.112 0.888 21 F -0.204 7.204 22 C -0.154 4.154 23 C -0.206 4.206 24 S 0.199 5.801 25 H 0.378 0.622 26 H 0.128 0.872 27 H -0.239 1.239 28 H -0.234 1.234 29 H 0.157 0.843 30 H 0.400 0.600 31 H 0.077 0.923 32 H 0.080 0.920 33 H 0.124 0.876 34 H 0.123 0.877 35 H 0.122 0.878 36 H 0.123 0.877 37 H 0.122 0.878 38 H 0.088 0.912 39 H 0.103 0.897 40 H 0.104 0.896 41 H 0.085 0.915 42 H 0.170 0.830 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.015 3.717 -2.632 5.462 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.329 6.329 2 C -0.145 4.145 3 Si 0.548 3.452 4 C -0.358 4.358 5 C -0.082 4.082 6 C -0.173 4.173 7 C 0.364 3.636 8 O -0.408 6.408 9 N -0.374 5.374 10 C 0.023 3.977 11 C -0.056 4.056 12 C -0.069 4.069 13 C -0.138 4.138 14 C -0.134 4.134 15 C -0.138 4.138 16 C -0.133 4.133 17 C -0.127 4.127 18 C -0.177 4.177 19 C 0.029 3.971 20 H 0.130 0.870 21 F -0.184 7.184 22 C -0.191 4.191 23 C -0.344 4.344 24 S 0.465 5.535 25 H 0.226 0.774 26 H 0.146 0.854 27 H -0.163 1.163 28 H -0.157 1.157 29 H 0.174 0.826 30 H 0.235 0.765 31 H 0.096 0.904 32 H 0.098 0.902 33 H 0.142 0.858 34 H 0.141 0.859 35 H 0.140 0.860 36 H 0.141 0.859 37 H 0.140 0.860 38 H 0.107 0.893 39 H 0.121 0.879 40 H 0.122 0.878 41 H 0.104 0.896 42 H 0.187 0.813 Dipole moment (debyes) X Y Z Total from point charges 3.060 5.061 -1.852 6.197 hybrid contribution -1.292 -1.375 -0.914 2.096 sum 1.768 3.686 -2.766 4.936 Atomic orbital electron populations 1.86647 1.17130 1.79848 1.49228 1.24408 0.83888 1.09999 0.96173 0.95334 0.91657 0.75029 0.83140 1.24754 1.08603 0.99151 1.03333 1.21045 0.98149 0.94393 0.94660 1.20226 1.04467 0.94636 0.97987 1.17587 0.79019 0.86672 0.80282 1.90834 1.39976 1.50347 1.59665 1.45703 1.53951 1.14142 1.23616 1.21147 0.99916 0.83986 0.92618 1.20771 0.95140 0.96074 0.93628 1.19398 0.94918 0.96010 0.96589 1.21072 0.99742 0.95229 0.97791 1.21178 0.96418 0.99503 0.96305 1.21239 0.94682 0.97879 0.99970 1.21202 0.99902 0.95267 0.96920 1.20983 0.95587 0.99677 0.96407 1.23689 0.97685 0.94639 1.01712 1.23142 0.83546 0.92163 0.98207 0.87002 1.92830 1.55523 1.82762 1.87312 1.23783 0.95122 0.96233 1.04003 1.25787 1.04548 0.98949 1.05156 1.83109 1.46583 1.11190 1.12569 0.77416 0.85411 1.16290 1.15676 0.82570 0.76503 0.90446 0.90210 0.85844 0.85865 0.85961 0.85867 0.85997 0.89296 0.87851 0.87803 0.89629 0.81299 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.44 12.84 -35.23 -0.45 -0.89 16 2 C -0.03 0.02 2.95 36.01 0.11 0.13 16 3 Si 0.65 -1.08 30.91 -169.99 -5.25 -6.33 16 4 C -0.24 0.08 5.69 -36.18 -0.21 -0.13 16 5 C -0.05 -0.08 9.91 -39.02 -0.39 -0.46 16 6 C -0.15 -0.15 5.98 -104.63 -0.63 -0.77 16 7 C 0.58 1.36 7.79 -12.62 -0.10 1.26 16 8 O -0.53 -3.30 16.80 5.25 0.09 -3.22 16 9 N -0.72 0.50 5.16 -61.45 -0.32 0.19 16 10 C 0.15 -0.16 4.84 -4.04 -0.02 -0.18 16 11 C -0.06 0.13 0.63 -154.84 -0.10 0.03 16 12 C -0.07 0.09 4.51 -104.63 -0.47 -0.38 16 13 C -0.12 0.20 9.05 -39.59 -0.36 -0.16 16 14 C -0.12 0.14 10.05 -39.58 -0.40 -0.26 16 15 C -0.12 0.08 10.05 -39.58 -0.40 -0.31 16 16 C -0.11 0.06 10.05 -39.58 -0.40 -0.34 16 17 C -0.11 0.07 9.34 -39.58 -0.37 -0.30 16 18 C -0.14 0.28 7.01 -25.78 -0.18 0.10 16 19 C 0.07 -0.08 5.32 -25.78 -0.14 -0.22 16 20 H 0.11 -0.27 7.61 -51.93 -0.40 -0.66 16 21 F -0.20 -0.41 17.41 2.25 0.04 -0.37 16 22 C -0.15 0.38 6.09 -25.92 -0.16 0.22 16 23 C -0.21 0.32 10.38 29.93 0.31 0.64 16 24 S 0.20 -0.39 20.18 -107.50 -2.17 -2.56 16 25 H 0.38 -0.77 8.70 45.56 0.40 -0.38 16 26 H 0.13 -0.19 7.96 -51.93 -0.41 -0.60 16 27 H -0.24 0.03 7.11 56.52 0.40 0.44 16 28 H -0.23 -0.29 7.11 56.52 0.40 0.11 16 29 H 0.16 0.38 8.06 -52.49 -0.42 -0.04 16 30 H 0.40 -1.06 6.72 -40.82 -0.27 -1.33 16 31 H 0.08 -0.01 7.97 -51.93 -0.41 -0.43 16 32 H 0.08 -0.07 7.31 -51.93 -0.38 -0.45 16 33 H 0.12 -0.41 6.44 -52.48 -0.34 -0.75 16 34 H 0.12 -0.34 8.06 -52.49 -0.42 -0.76 16 35 H 0.12 -0.25 8.06 -52.48 -0.42 -0.67 16 36 H 0.12 -0.21 8.06 -52.49 -0.42 -0.63 16 37 H 0.12 -0.19 8.06 -52.49 -0.42 -0.61 16 38 H 0.09 -0.25 8.10 -51.93 -0.42 -0.67 16 39 H 0.10 -0.14 8.09 -51.93 -0.42 -0.56 16 40 H 0.10 -0.24 6.83 -51.93 -0.35 -0.60 16 41 H 0.09 -0.27 7.95 -51.93 -0.41 -0.68 16 42 H 0.17 -0.71 7.01 -52.49 -0.37 -1.08 16 LS Contribution 368.12 15.07 5.55 5.55 Total: 0.00 -7.60 368.12 -11.51 -19.11 By element: Atomic # 1 Polarization: -5.24 SS G_CDS: -5.11 Total: -10.35 kcal Atomic # 6 Polarization: 2.76 SS G_CDS: -3.88 Total: -1.13 kcal Atomic # 7 Polarization: 0.50 SS G_CDS: -0.32 Total: 0.19 kcal Atomic # 8 Polarization: -3.74 SS G_CDS: -0.36 Total: -4.11 kcal Atomic # 9 Polarization: -0.41 SS G_CDS: 0.04 Total: -0.37 kcal Atomic # 14 Polarization: -1.08 SS G_CDS: -5.25 Total: -6.33 kcal Atomic # 16 Polarization: -0.39 SS G_CDS: -2.17 Total: -2.56 kcal Total LS contribution 5.55 Total: 5.55 kcal Total: -7.60 -11.51 -19.11 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13458982_6894386.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -11.692 kcal (2) G-P(sol) polarization free energy of solvation -7.600 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -19.292 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.509 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.109 kcal (6) G-S(sol) free energy of system = (1) + (5) -30.801 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds