Wall clock time and date at job start Sat Mar 6 2021 21:30:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50711 * 1 3 3 C 1.37936 * 120.07231 * 2 1 4 4 C 1.38374 * 120.14156 * 179.97438 * 3 2 1 5 5 C 1.50707 * 119.85387 * 180.02562 * 4 3 2 6 6 C 1.38340 * 120.29717 * 359.97438 * 4 3 2 7 7 C 1.50698 * 119.93046 * 180.02562 * 6 4 3 8 8 O 1.42898 * 109.47320 * 258.36526 * 7 6 4 9 9 Si 1.86302 * 109.47010 * 138.36182 * 7 6 4 10 10 C 1.37979 * 120.13940 * 359.78905 * 6 4 3 11 11 C 1.39556 * 119.85627 * 0.44261 * 10 6 4 12 12 C 1.47845 * 120.14671 * 179.81526 * 11 10 6 13 13 O 1.21551 * 120.00017 * 182.25535 * 12 11 10 14 14 N 1.34778 * 119.99708 * 2.24987 * 12 11 10 15 15 C 1.46504 * 119.99812 * 184.59449 * 14 12 11 16 16 C 1.52998 * 109.46872 * 175.03408 * 15 14 12 17 17 C 1.50697 * 112.84959 * 293.98949 * 16 15 14 18 18 C 1.38241 * 119.99851 * 121.98173 * 17 16 15 19 19 C 1.38231 * 119.99735 * 179.76803 * 18 17 16 20 20 C 1.38233 * 120.00374 * 0.50781 * 19 18 17 21 21 C 1.38240 * 120.00101 * 359.74732 * 20 19 18 22 22 C 1.38239 * 120.00135 * 302.25961 * 17 16 15 23 23 C 1.53786 * 113.61092 * 162.68998 * 16 15 14 24 24 C 1.53784 * 87.07769 * 270.88120 * 23 16 15 25 25 H 1.09000 * 113.69323 * 89.12975 * 24 23 16 26 26 F 1.39900 * 113.61245 * 220.02038 * 24 23 16 27 27 C 1.53775 * 87.08355 * 334.56673 * 24 23 16 28 28 H 1.08998 * 109.47218 * 262.45162 * 1 2 3 29 29 H 1.08999 * 109.46479 * 22.45110 * 1 2 3 30 30 H 1.09000 * 109.47121 * 142.44917 * 1 2 3 31 31 H 1.07998 * 119.92635 * 0.02562 * 3 2 1 32 32 H 1.08995 * 109.47278 * 89.99593 * 5 4 3 33 33 H 1.09000 * 109.46818 * 210.00389 * 5 4 3 34 34 H 1.09000 * 109.46625 * 329.99809 * 5 4 3 35 35 H 1.08995 * 109.47039 * 18.36744 * 7 6 4 36 36 H 0.96701 * 113.99785 * 299.99834 * 8 7 6 37 37 H 1.48501 * 109.99903 * 184.87966 * 9 7 6 38 38 H 1.48495 * 110.00202 * 306.20139 * 9 7 6 39 39 H 1.08006 * 120.07270 * 180.23329 * 10 6 4 40 40 H 0.96992 * 120.00360 * 4.88018 * 14 12 11 41 41 H 1.09001 * 109.46983 * 295.03640 * 15 14 12 42 42 H 1.09003 * 109.46906 * 55.03276 * 15 14 12 43 43 H 1.07994 * 119.99849 * 0.02562 * 18 17 16 44 44 H 1.07999 * 119.99769 * 180.23071 * 19 18 17 45 45 H 1.08000 * 120.00223 * 179.72872 * 20 19 18 46 46 H 1.07997 * 120.00678 * 179.97438 * 21 20 19 47 47 H 1.07998 * 120.00248 * 359.97438 * 22 17 16 48 48 H 1.09004 * 113.61574 * 25.42816 * 23 16 15 49 49 H 1.09005 * 113.61537 * 156.33400 * 23 16 15 50 50 H 1.09000 * 113.61760 * 270.88862 * 27 24 23 51 51 H 1.09000 * 113.61901 * 139.97481 * 27 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5071 0.0000 0.0000 3 6 2.1983 1.1937 0.0000 4 6 3.5820 1.1954 0.0005 5 6 4.3307 2.5033 0.0011 6 6 4.2814 0.0018 0.0016 7 6 5.7883 0.0132 0.0028 8 8 6.2678 -0.2554 -1.3163 9 14 6.4184 -1.2942 1.1709 10 6 3.6021 -1.1992 0.0065 11 6 2.2066 -1.2081 0.0011 12 6 1.4722 -2.4912 0.0022 13 8 0.2576 -2.4964 -0.0439 14 7 2.1496 -3.6553 0.0543 15 6 1.4292 -4.9270 -0.0460 16 6 2.4338 -6.0804 -0.0841 17 6 3.2839 -6.0752 -1.3284 18 6 4.6608 -6.0105 -1.2245 19 6 5.4408 -6.0105 -2.3657 20 6 4.8435 -6.0646 -3.6112 21 6 3.4663 -6.1240 -3.7153 22 6 2.6865 -6.1292 -2.5739 23 6 1.8110 -7.4503 0.2330 24 6 2.1193 -7.1603 1.7114 25 1 1.3185 -6.6340 2.2307 26 9 2.5826 -8.2762 2.4166 27 6 3.2430 -6.2357 1.2143 28 1 -0.3633 -0.1350 1.0187 29 1 -0.3632 0.9498 -0.3925 30 1 -0.3633 -0.8147 -0.6263 31 1 1.6583 2.1290 0.0004 32 1 4.5107 2.8185 1.0289 33 1 5.2837 2.3767 -0.5124 34 1 3.7389 3.2608 -0.5128 35 1 6.1440 0.9914 0.3264 36 1 5.9892 -1.1116 -1.6692 37 1 7.8979 -1.2155 1.2709 38 1 5.8082 -1.1133 2.5126 39 1 4.1492 -2.1305 0.0112 40 1 3.1134 -3.6511 0.1624 41 1 0.7751 -5.0432 0.8181 42 1 0.8318 -4.9352 -0.9577 43 1 5.1273 -5.9641 -0.2516 44 1 6.5167 -5.9638 -2.2844 45 1 5.4528 -6.0602 -4.5029 46 1 2.9996 -6.1659 -4.6883 47 1 1.6106 -6.1757 -2.6552 48 1 0.7451 -7.5071 0.0122 49 1 2.3739 -8.2905 -0.1738 50 1 4.1974 -6.7438 1.0758 51 1 3.3332 -5.3118 1.7856 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13458982_9599494.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:30:40 Heat of formation + Delta-G solvation = -33.217438 kcal Electronic energy + Delta-G solvation = -34554.334781 eV Core-core repulsion = 30107.268159 eV Total energy + Delta-G solvation = -4447.066622 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 370.173 amu Computer time = 1.12 seconds Orbital eigenvalues (eV) -48.52462 -41.86780 -41.16208 -39.85870 -38.68411 -37.62336 -35.58361 -34.50732 -33.23191 -31.94649 -31.74627 -29.67906 -28.96386 -27.78218 -26.98724 -25.62399 -24.94448 -23.60404 -23.15705 -22.45946 -22.15761 -21.13191 -19.86944 -18.91077 -18.34240 -17.60868 -17.52489 -17.22538 -16.64961 -16.52018 -16.32227 -16.17808 -16.09263 -15.88908 -15.51624 -15.41998 -15.33241 -14.91693 -14.83418 -14.69328 -14.40331 -14.34070 -14.20095 -14.12952 -13.93223 -13.59158 -13.49175 -13.41578 -13.26064 -13.08847 -12.92956 -12.64915 -12.53581 -12.40284 -12.35650 -12.23718 -12.09057 -11.80039 -11.65722 -11.27310 -11.18761 -10.66482 -10.49482 -10.18898 -9.85338 -9.72459 -9.54987 -9.53519 -5.10667 -0.25202 0.18006 0.50294 0.59472 1.27763 1.63293 1.78006 1.96170 2.03771 2.68005 2.91282 3.21226 3.30912 3.44342 3.48570 3.54855 3.63400 3.67159 3.72413 3.75338 3.81753 3.93267 4.11407 4.16864 4.20497 4.22351 4.28639 4.38390 4.42637 4.52676 4.55430 4.55964 4.65491 4.69108 4.70709 4.71709 4.74099 4.78143 4.79723 4.80159 4.90953 4.93612 5.03160 5.04883 5.09475 5.18651 5.21338 5.24875 5.34501 5.39667 5.47591 5.55092 5.68045 5.74113 5.75108 5.80971 6.19580 6.47422 6.74969 7.16881 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.123 4.123 2 C -0.028 4.028 3 C -0.138 4.138 4 C -0.043 4.043 5 C -0.129 4.129 6 C -0.139 4.139 7 C -0.073 4.073 8 O -0.550 6.550 9 Si 0.771 3.229 10 C -0.065 4.065 11 C -0.157 4.157 12 C 0.560 3.440 13 O -0.562 6.562 14 N -0.708 5.708 15 C 0.147 3.853 16 C -0.042 4.042 17 C -0.070 4.070 18 C -0.120 4.120 19 C -0.120 4.120 20 C -0.132 4.132 21 C -0.132 4.132 22 C -0.122 4.122 23 C -0.139 4.139 24 C 0.054 3.946 25 H 0.122 0.878 26 F -0.224 7.224 27 C -0.150 4.150 28 H 0.069 0.931 29 H 0.069 0.931 30 H 0.086 0.914 31 H 0.142 0.858 32 H 0.084 0.916 33 H 0.076 0.924 34 H 0.079 0.921 35 H 0.114 0.886 36 H 0.394 0.606 37 H -0.292 1.292 38 H -0.288 1.288 39 H 0.161 0.839 40 H 0.412 0.588 41 H 0.077 0.923 42 H 0.070 0.930 43 H 0.148 0.852 44 H 0.141 0.859 45 H 0.128 0.872 46 H 0.123 0.877 47 H 0.119 0.881 48 H 0.092 0.908 49 H 0.096 0.904 50 H 0.112 0.888 51 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.996 -0.902 -0.860 3.245 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C -0.029 4.029 3 C -0.156 4.156 4 C -0.043 4.043 5 C -0.185 4.185 6 C -0.140 4.140 7 C -0.182 4.182 8 O -0.358 6.358 9 Si 0.675 3.325 10 C -0.083 4.083 11 C -0.160 4.160 12 C 0.349 3.651 13 O -0.443 6.443 14 N -0.361 5.361 15 C 0.024 3.976 16 C -0.042 4.042 17 C -0.071 4.071 18 C -0.138 4.138 19 C -0.138 4.138 20 C -0.150 4.150 21 C -0.150 4.150 22 C -0.140 4.140 23 C -0.177 4.177 24 C 0.018 3.982 25 H 0.139 0.861 26 F -0.205 7.205 27 C -0.187 4.187 28 H 0.087 0.913 29 H 0.088 0.912 30 H 0.104 0.896 31 H 0.160 0.840 32 H 0.103 0.897 33 H 0.094 0.906 34 H 0.098 0.902 35 H 0.131 0.869 36 H 0.243 0.757 37 H -0.219 1.219 38 H -0.215 1.215 39 H 0.178 0.822 40 H 0.249 0.751 41 H 0.095 0.905 42 H 0.089 0.911 43 H 0.166 0.834 44 H 0.159 0.841 45 H 0.146 0.854 46 H 0.141 0.859 47 H 0.137 0.863 48 H 0.111 0.889 49 H 0.115 0.885 50 H 0.131 0.869 51 H 0.119 0.881 Dipole moment (debyes) X Y Z Total from point charges 2.843 -0.555 -0.084 2.897 hybrid contribution -0.064 0.581 -0.150 0.604 sum 2.778 0.026 -0.234 2.788 Atomic orbital electron populations 1.21098 0.90193 1.03455 1.03188 1.20225 0.96983 0.92067 0.93670 1.21158 0.93636 0.98091 1.02742 1.20244 0.93698 0.95964 0.94394 1.21039 1.00640 0.93389 1.03447 1.20188 0.96576 0.93100 1.04100 1.25237 0.91105 1.08989 0.92909 1.86516 1.75836 1.43661 1.29751 0.94197 0.77186 0.84761 0.76311 1.21242 0.92387 0.98347 0.96343 1.19692 0.93924 0.92807 1.09580 1.18323 0.86750 0.84212 0.75777 1.90721 1.14786 1.87524 1.51230 1.45661 1.11783 1.04694 1.73942 1.21142 0.93170 0.80506 1.02803 1.20567 0.95710 0.94867 0.93093 1.19431 0.93880 1.00789 0.92955 1.21383 0.92604 0.99954 0.99860 1.21438 1.01029 0.99121 0.92164 1.21431 0.94900 0.99940 0.98715 1.21333 0.94547 1.00259 0.98824 1.21079 1.00076 1.00471 0.92396 1.23626 1.03242 0.96482 0.94321 1.23368 0.98892 0.84532 0.91397 0.86087 1.92788 1.90378 1.55996 1.81357 1.23842 0.98793 1.01311 0.94780 0.91272 0.91184 0.89605 0.84014 0.89747 0.90552 0.90183 0.86874 0.75661 1.21873 1.21451 0.82180 0.75054 0.90510 0.91150 0.83418 0.84113 0.85373 0.85887 0.86305 0.88913 0.88525 0.86933 0.88130 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.56 8.84 71.24 0.63 0.07 16 2 C -0.03 -0.11 5.91 -19.60 -0.12 -0.23 16 3 C -0.14 -0.24 9.31 22.23 0.21 -0.03 16 4 C -0.04 -0.03 5.89 -19.81 -0.12 -0.14 16 5 C -0.13 0.30 9.20 71.24 0.66 0.95 16 6 C -0.14 0.17 4.84 -19.90 -0.10 0.08 16 7 C -0.07 0.21 2.32 71.24 0.17 0.37 16 8 O -0.55 1.32 12.88 -148.98 -1.92 -0.60 16 9 Si 0.77 -3.67 30.82 68.60 2.11 -1.56 16 10 C -0.07 0.21 8.15 22.53 0.18 0.39 16 11 C -0.16 -0.30 5.87 -20.09 -0.12 -0.42 16 12 C 0.56 1.66 7.74 86.79 0.67 2.33 16 13 O -0.56 -5.48 13.25 -3.88 -0.05 -5.53 16 14 N -0.71 2.80 5.12 -465.96 -2.39 0.41 16 15 C 0.15 -0.63 4.79 86.38 0.41 -0.21 16 16 C -0.04 0.29 0.66 -52.40 -0.03 0.25 16 17 C -0.07 0.36 4.74 -19.86 -0.09 0.27 16 18 C -0.12 0.84 9.12 22.27 0.20 1.04 16 19 C -0.12 0.68 10.05 22.27 0.22 0.90 16 20 C -0.13 0.42 10.05 22.27 0.22 0.65 16 21 C -0.13 0.23 10.05 22.27 0.22 0.45 16 22 C -0.12 0.28 9.28 22.27 0.21 0.49 16 23 C -0.14 0.74 7.10 31.12 0.22 0.96 16 24 C 0.05 -0.24 5.31 31.12 0.17 -0.07 16 25 H 0.12 -0.81 7.61 -2.39 -0.02 -0.82 16 26 F -0.22 -0.64 17.41 44.97 0.78 0.15 16 27 C -0.15 1.24 6.14 31.12 0.19 1.43 16 28 H 0.07 0.36 8.14 -2.39 -0.02 0.34 16 29 H 0.07 0.11 8.03 -2.39 -0.02 0.09 16 30 H 0.09 0.72 5.67 -2.39 -0.01 0.71 16 31 H 0.14 -0.18 8.05 -2.91 -0.02 -0.21 16 32 H 0.08 -0.33 8.14 -2.39 -0.02 -0.35 16 33 H 0.08 -0.14 6.45 -2.39 -0.02 -0.15 16 34 H 0.08 -0.28 8.08 -2.39 -0.02 -0.30 16 35 H 0.11 -0.22 5.88 -2.39 -0.01 -0.24 16 36 H 0.39 -4.11 8.70 -74.06 -0.64 -4.75 16 37 H -0.29 -0.69 7.11 99.48 0.71 0.02 16 38 H -0.29 -0.37 7.11 99.48 0.71 0.33 16 39 H 0.16 -1.77 4.80 -2.91 -0.01 -1.78 16 40 H 0.41 -3.78 6.14 -92.71 -0.57 -4.35 16 41 H 0.08 -0.30 7.31 -2.39 -0.02 -0.32 16 42 H 0.07 -0.11 7.41 -2.39 -0.02 -0.12 16 43 H 0.15 -1.72 6.05 -2.91 -0.02 -1.74 16 44 H 0.14 -1.32 8.06 -2.91 -0.02 -1.34 16 45 H 0.13 -0.68 8.06 -2.91 -0.02 -0.71 16 46 H 0.12 -0.38 8.06 -2.91 -0.02 -0.40 16 47 H 0.12 -0.34 7.60 -2.91 -0.02 -0.36 16 48 H 0.09 -0.59 8.10 -2.39 -0.02 -0.61 16 49 H 0.10 -0.35 8.10 -2.38 -0.02 -0.37 16 50 H 0.11 -1.01 6.36 -2.39 -0.02 -1.03 16 51 H 0.10 -1.09 7.74 -2.39 -0.02 -1.11 16 Total: 0.00 -19.53 407.59 2.36 -17.18 By element: Atomic # 1 Polarization: -19.37 SS G_CDS: -0.19 Total: -19.57 kcal Atomic # 6 Polarization: 5.52 SS G_CDS: 4.01 Total: 9.53 kcal Atomic # 7 Polarization: 2.80 SS G_CDS: -2.39 Total: 0.41 kcal Atomic # 8 Polarization: -4.17 SS G_CDS: -1.97 Total: -6.14 kcal Atomic # 9 Polarization: -0.64 SS G_CDS: 0.78 Total: 0.15 kcal Atomic # 14 Polarization: -3.67 SS G_CDS: 2.11 Total: -1.56 kcal Total: -19.53 2.36 -17.18 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13458982_9599494.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -16.042 kcal (2) G-P(sol) polarization free energy of solvation -19.533 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -35.576 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.358 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.175 kcal (6) G-S(sol) free energy of system = (1) + (5) -33.217 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.12 seconds