Wall clock time and date at job start Sat Mar 6 2021 21:30:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86297 * 109.46873 * 2 1 4 4 C 1.50704 * 109.46788 * 240.00400 * 2 1 3 5 5 C 1.34234 * 126.50095 * 105.02414 * 4 2 1 6 6 N 1.36837 * 109.93943 * 179.71124 * 5 4 2 7 7 C 1.46500 * 125.06150 * 180.23996 * 6 5 4 8 8 C 1.50691 * 109.47488 * 265.02466 * 7 6 5 9 9 O 1.21286 * 120.00119 * 0.02562 * 8 7 6 10 10 N 1.34775 * 120.00273 * 180.02562 * 8 7 6 11 11 C 1.46505 * 120.00194 * 179.97438 * 10 8 7 12 12 C 1.53000 * 109.46997 * 175.10477 * 11 10 8 13 13 C 1.50701 * 112.85123 * 294.00844 * 12 11 10 14 14 C 1.38231 * 119.99535 * 113.51496 * 13 12 11 15 15 C 1.38242 * 119.99695 * 179.78886 * 14 13 12 16 16 C 1.38232 * 120.00003 * 0.46068 * 15 14 13 17 17 C 1.38233 * 119.99907 * 359.76966 * 16 15 14 18 18 C 1.38234 * 120.00150 * 293.78529 * 13 12 11 19 19 C 1.53785 * 113.61161 * 162.69999 * 12 11 10 20 20 C 1.53779 * 87.08321 * 270.88896 * 19 12 11 21 21 H 1.08997 * 113.68938 * 89.12808 * 20 19 12 22 22 F 1.39897 * 113.61101 * 220.02053 * 20 19 12 23 23 C 1.53780 * 113.61037 * 65.20908 * 12 11 10 24 24 C 1.37691 * 109.87261 * 0.26208 * 6 5 4 25 25 C 1.39081 * 133.51381 * 180.02562 * 24 6 5 26 26 C 1.37786 * 119.78036 * 179.97438 * 25 24 6 27 27 C 1.38796 * 120.66454 * 0.02731 * 26 25 24 28 28 C 1.36661 * 120.52804 * 359.97438 * 27 26 25 29 29 C 1.39592 * 119.76418 * 359.97438 * 28 27 26 30 30 H 0.96700 * 113.99510 * 299.99458 * 1 2 3 31 31 H 1.08997 * 109.47658 * 120.00504 * 2 1 3 32 32 H 1.48508 * 109.99789 * 178.68344 * 3 2 1 33 33 H 1.48501 * 110.00321 * 299.99965 * 3 2 1 34 34 H 1.08003 * 125.02958 * 359.96972 * 5 4 2 35 35 H 1.09001 * 109.46939 * 25.03063 * 7 6 5 36 36 H 1.09003 * 109.46237 * 145.02360 * 7 6 5 37 37 H 0.96992 * 119.99925 * 359.97438 * 10 8 7 38 38 H 1.08996 * 109.46932 * 295.11036 * 11 10 8 39 39 H 1.09003 * 109.46602 * 55.11175 * 11 10 8 40 40 H 1.08001 * 120.00399 * 359.97438 * 14 13 12 41 41 H 1.08001 * 120.00032 * 180.25430 * 15 14 13 42 42 H 1.07997 * 120.00213 * 179.79383 * 16 15 14 43 43 H 1.08001 * 120.00209 * 180.02562 * 17 16 15 44 44 H 1.08001 * 120.00060 * 359.97438 * 18 13 12 45 45 H 1.09003 * 113.61064 * 25.44009 * 19 12 11 46 46 H 1.09002 * 113.61162 * 156.33511 * 19 12 11 47 47 H 1.09000 * 113.61049 * 203.66100 * 23 12 11 48 48 H 1.08996 * 113.61475 * 334.56004 * 23 12 11 49 49 H 1.07994 * 120.11132 * 359.94402 * 25 24 6 50 50 H 1.07999 * 119.67214 * 180.02562 * 26 25 24 51 51 H 1.07995 * 119.73213 * 179.97438 * 27 26 25 52 52 H 1.08003 * 120.11816 * 180.02562 * 28 27 26 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2306 5 6 2.4611 -0.1376 -2.3228 6 7 2.8088 -1.0993 -3.2320 7 6 3.4202 -0.8410 -4.5381 8 6 2.3461 -0.7857 -5.5935 9 8 1.1840 -0.9458 -5.2851 10 7 2.6766 -0.5584 -6.8802 11 6 1.6323 -0.5052 -7.9063 12 6 2.2554 -0.1157 -9.2483 13 6 2.8052 1.2874 -9.2530 14 6 4.1669 1.4957 -9.3681 15 6 4.6709 2.7829 -9.3769 16 6 3.8141 3.8614 -9.2609 17 6 2.4529 3.6530 -9.1410 18 6 1.9484 2.3659 -9.1367 19 6 1.3606 -0.4328 -10.4581 20 6 2.0282 -1.8178 -10.4895 21 1 1.5230 -2.5615 -9.8732 22 9 2.3025 -2.2785 -11.7816 23 6 3.2367 -1.1638 -9.7991 24 6 2.4980 -2.3459 -2.7367 25 6 2.6371 -3.6366 -3.2358 26 6 2.2203 -4.7110 -2.4805 27 6 1.6614 -4.5191 -1.2246 28 6 1.5153 -3.2595 -0.7149 29 6 1.9318 -2.1567 -1.4626 30 1 -0.3932 0.4416 0.7651 31 1 1.7925 -0.5139 0.8899 32 1 3.5346 1.7703 0.0321 33 1 1.5614 2.4679 -1.2085 34 1 2.5970 0.9249 -2.4616 35 1 3.9505 0.1109 -4.5091 36 1 4.1218 -1.6408 -4.7752 37 1 3.6058 -0.4300 -7.1268 38 1 1.1601 -1.4835 -7.9952 39 1 0.8837 0.2355 -7.6248 40 1 4.8368 0.6529 -9.4543 41 1 5.7344 2.9458 -9.4709 42 1 4.2081 4.8670 -9.2644 43 1 1.7834 4.4956 -9.0508 44 1 0.8849 2.2030 -9.0428 45 1 0.2977 -0.4657 -10.2183 46 1 1.5790 0.1772 -11.3346 47 1 3.9681 -0.7537 -10.4954 48 1 3.6886 -1.7869 -9.0273 49 1 3.0699 -3.7962 -4.2122 50 1 2.3295 -5.7125 -2.8695 51 1 1.3394 -5.3719 -0.6456 52 1 1.0799 -3.1178 0.2633 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_13458982_9818708.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sat Mar 6 2021 21:30:44 Heat of formation + Delta-G solvation = 14.723257 kcal Electronic energy + Delta-G solvation = -36788.561978 eV Core-core repulsion = 32021.696028 eV Total energy + Delta-G solvation = -4766.865950 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 395.168 amu Computer time = 1.53 seconds Orbital eigenvalues (eV) -48.63073 -42.65490 -41.68644 -40.41622 -38.84510 -38.11109 -37.62131 -35.51363 -34.28054 -32.14224 -31.91068 -31.60475 -30.37982 -29.72932 -28.04703 -27.14451 -25.75870 -24.93060 -23.82034 -23.29525 -22.76702 -22.55681 -21.71871 -20.64847 -20.06187 -18.71277 -18.42383 -18.28170 -18.20401 -17.79865 -17.50111 -16.88977 -16.65611 -16.51911 -16.47495 -16.10867 -15.91943 -15.59992 -15.56018 -15.41446 -15.12816 -14.91663 -14.86462 -14.78877 -14.55795 -14.42702 -14.33775 -14.18688 -13.76333 -13.65285 -13.61439 -13.48978 -13.26259 -12.77173 -12.64905 -12.58314 -12.52290 -12.48311 -12.25698 -12.05961 -11.85000 -11.80980 -11.41513 -11.34059 -11.27654 -10.64877 -10.32615 -10.18331 -9.88719 -9.71154 -9.26080 -8.74089 -4.97252 0.04036 0.34528 0.42935 0.56806 1.23237 1.32317 1.32713 1.55738 1.68749 1.97300 2.01841 2.75577 2.87802 3.07094 3.16635 3.35878 3.43014 3.45749 3.52423 3.54588 3.62858 3.67536 3.79147 3.81418 3.96477 3.98822 4.05562 4.06239 4.14146 4.18125 4.22587 4.23759 4.33997 4.39727 4.51895 4.52857 4.58054 4.60723 4.61247 4.62738 4.65580 4.70790 4.79917 4.83690 4.88688 5.03583 5.07210 5.08333 5.16596 5.21520 5.44366 5.51999 5.57556 5.58537 5.58634 5.65191 5.66185 6.02356 6.03890 6.14994 6.31500 6.98100 6.98658 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.570 6.570 2 C -0.051 4.051 3 Si 0.787 3.213 4 C -0.179 4.179 5 C 0.051 3.949 6 N -0.467 5.467 7 C 0.086 3.914 8 C 0.493 3.507 9 O -0.570 6.570 10 N -0.705 5.705 11 C 0.150 3.850 12 C -0.040 4.040 13 C -0.071 4.071 14 C -0.119 4.119 15 C -0.124 4.124 16 C -0.132 4.132 17 C -0.131 4.131 18 C -0.124 4.124 19 C -0.141 4.141 20 C 0.056 3.944 21 H 0.122 0.878 22 F -0.223 7.223 23 C -0.144 4.144 24 C 0.091 3.909 25 C -0.136 4.136 26 C -0.102 4.102 27 C -0.151 4.151 28 C -0.082 4.082 29 C -0.120 4.120 30 H 0.398 0.602 31 H 0.080 0.920 32 H -0.282 1.282 33 H -0.296 1.296 34 H 0.172 0.828 35 H 0.151 0.849 36 H 0.151 0.849 37 H 0.417 0.583 38 H 0.075 0.925 39 H 0.061 0.939 40 H 0.145 0.855 41 H 0.139 0.861 42 H 0.131 0.869 43 H 0.127 0.873 44 H 0.120 0.880 45 H 0.091 0.909 46 H 0.097 0.903 47 H 0.107 0.893 48 H 0.102 0.898 49 H 0.135 0.865 50 H 0.151 0.849 51 H 0.144 0.856 52 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.669 2.462 0.825 6.235 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.380 6.380 2 C -0.160 4.160 3 Si 0.691 3.309 4 C -0.187 4.187 5 C -0.074 4.074 6 N -0.150 5.150 7 C -0.038 4.038 8 C 0.278 3.722 9 O -0.448 6.448 10 N -0.358 5.358 11 C 0.026 3.974 12 C -0.041 4.041 13 C -0.071 4.071 14 C -0.137 4.137 15 C -0.142 4.142 16 C -0.150 4.150 17 C -0.149 4.149 18 C -0.142 4.142 19 C -0.179 4.179 20 C 0.020 3.980 21 H 0.140 0.860 22 F -0.204 7.204 23 C -0.181 4.181 24 C -0.014 4.014 25 C -0.156 4.156 26 C -0.121 4.121 27 C -0.170 4.170 28 C -0.101 4.101 29 C -0.124 4.124 30 H 0.249 0.751 31 H 0.098 0.902 32 H -0.208 1.208 33 H -0.223 1.223 34 H 0.189 0.811 35 H 0.169 0.831 36 H 0.168 0.832 37 H 0.255 0.745 38 H 0.093 0.907 39 H 0.080 0.920 40 H 0.163 0.837 41 H 0.157 0.843 42 H 0.149 0.851 43 H 0.145 0.855 44 H 0.138 0.862 45 H 0.110 0.890 46 H 0.115 0.885 47 H 0.125 0.875 48 H 0.120 0.880 49 H 0.153 0.847 50 H 0.168 0.832 51 H 0.161 0.839 52 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges 5.556 2.693 -0.263 6.180 hybrid contribution -0.018 -0.166 -0.683 0.703 sum 5.538 2.527 -0.946 6.161 Atomic orbital electron populations 1.86515 1.18149 1.82397 1.50916 1.24320 0.85084 1.10963 0.95618 0.94169 0.77478 0.74140 0.85129 1.20044 1.09047 0.91987 0.97572 1.21687 1.02066 0.94218 0.89420 1.43355 1.53340 1.03921 1.14378 1.21960 0.94047 1.08790 0.79026 1.21312 0.90305 0.76261 0.84283 1.90821 1.22008 1.50089 1.81861 1.45663 1.11862 1.72425 1.05890 1.21070 0.89886 1.01751 0.84722 1.20549 0.97816 0.92136 0.93576 1.19463 0.93785 0.93211 1.00653 1.21311 0.94476 0.97875 1.00033 1.21455 1.00788 0.92609 0.99308 1.21457 0.93655 1.00100 0.99812 1.21372 0.96153 0.97321 1.00062 1.21118 1.00012 0.92678 1.00440 1.23644 1.00742 0.95713 0.97834 1.23342 0.99124 0.95880 0.79648 0.85991 1.92791 1.94824 1.90944 1.41824 1.23763 0.96727 0.96568 1.01058 1.18479 1.01711 0.86857 0.94332 1.20270 1.05309 0.88758 1.01262 1.21202 0.97567 0.99029 0.94266 1.20984 1.01970 0.97054 0.96987 1.20499 0.98496 0.91335 0.99744 1.19355 1.04240 0.93449 0.95352 0.75126 0.90169 1.20828 1.22312 0.81072 0.83116 0.83151 0.74513 0.90704 0.92019 0.83740 0.84311 0.85075 0.85498 0.86211 0.89009 0.88483 0.87470 0.87954 0.84682 0.83163 0.83858 0.85441 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 -3.45 12.86 -148.98 -1.92 -5.36 16 2 C -0.05 -0.24 3.05 71.24 0.22 -0.02 16 3 Si 0.79 -0.17 30.79 68.60 2.11 1.94 16 4 C -0.18 -1.97 5.61 -18.63 -0.10 -2.08 16 5 C 0.05 0.46 9.89 83.00 0.82 1.28 16 6 N -0.47 -3.20 2.27 -520.00 -1.18 -4.38 16 7 C 0.09 -0.24 6.48 85.63 0.55 0.32 16 8 C 0.49 1.10 7.90 87.65 0.69 1.79 16 9 O -0.57 -8.11 16.42 -3.05 -0.05 -8.16 16 10 N -0.70 3.21 5.18 -463.06 -2.40 0.81 16 11 C 0.15 -0.40 4.85 86.38 0.42 0.02 16 12 C -0.04 0.22 0.63 -52.40 -0.03 0.19 16 13 C -0.07 0.23 4.67 -19.87 -0.09 0.14 16 14 C -0.12 0.57 9.05 22.27 0.20 0.77 16 15 C -0.12 0.41 10.05 22.27 0.22 0.64 16 16 C -0.13 0.18 10.05 22.27 0.22 0.40 16 17 C -0.13 0.01 10.05 22.27 0.22 0.23 16 18 C -0.12 0.05 9.33 22.27 0.21 0.26 16 19 C -0.14 0.54 7.00 31.12 0.22 0.76 16 20 C 0.06 -0.19 5.32 31.12 0.17 -0.02 16 21 H 0.12 -0.71 7.61 -2.39 -0.02 -0.72 16 22 F -0.22 -0.83 17.41 44.97 0.78 -0.05 16 23 C -0.14 1.04 5.97 31.12 0.19 1.23 16 24 C 0.09 0.94 6.80 39.03 0.27 1.21 16 25 C -0.14 -0.88 10.00 22.37 0.22 -0.65 16 26 C -0.10 -0.51 10.01 22.30 0.22 -0.28 16 27 C -0.15 -0.96 9.97 22.03 0.22 -0.74 16 28 C -0.08 -0.82 10.05 22.23 0.22 -0.59 16 29 C -0.12 -1.53 6.35 -20.20 -0.13 -1.66 16 30 H 0.40 -2.22 8.74 -74.06 -0.65 -2.87 16 31 H 0.08 0.12 7.96 -2.39 -0.02 0.10 16 32 H -0.28 -1.08 7.11 99.48 0.71 -0.37 16 33 H -0.30 -1.90 7.04 99.48 0.70 -1.20 16 34 H 0.17 0.89 6.30 -2.91 -0.02 0.87 16 35 H 0.15 -1.38 8.12 -2.39 -0.02 -1.40 16 36 H 0.15 -1.40 8.14 -2.39 -0.02 -1.42 16 37 H 0.42 -4.43 8.08 -92.71 -0.75 -5.18 16 38 H 0.07 -0.15 7.31 -2.39 -0.02 -0.17 16 39 H 0.06 0.11 7.95 -2.39 -0.02 0.09 16 40 H 0.14 -1.36 6.45 -2.91 -0.02 -1.38 16 41 H 0.14 -0.95 8.06 -2.91 -0.02 -0.98 16 42 H 0.13 -0.52 8.06 -2.91 -0.02 -0.54 16 43 H 0.13 -0.24 8.06 -2.91 -0.02 -0.27 16 44 H 0.12 -0.12 8.06 -2.91 -0.02 -0.14 16 45 H 0.09 -0.42 8.10 -2.39 -0.02 -0.44 16 46 H 0.10 -0.20 8.10 -2.39 -0.02 -0.22 16 47 H 0.11 -0.76 6.83 -2.39 -0.02 -0.78 16 48 H 0.10 -1.08 7.75 -2.39 -0.02 -1.10 16 49 H 0.14 0.16 8.06 -2.91 -0.02 0.13 16 50 H 0.15 -0.12 8.06 -2.91 -0.02 -0.15 16 51 H 0.14 0.19 8.06 -2.91 -0.02 0.16 16 52 H 0.13 0.93 8.06 -2.91 -0.02 0.90 16 Total: 0.00 -31.19 434.04 2.10 -29.09 By element: Atomic # 1 Polarization: -16.67 SS G_CDS: -0.40 Total: -17.07 kcal Atomic # 6 Polarization: -1.98 SS G_CDS: 5.15 Total: 3.17 kcal Atomic # 7 Polarization: 0.01 SS G_CDS: -3.58 Total: -3.57 kcal Atomic # 8 Polarization: -11.56 SS G_CDS: -1.97 Total: -13.52 kcal Atomic # 9 Polarization: -0.83 SS G_CDS: 0.78 Total: -0.05 kcal Atomic # 14 Polarization: -0.17 SS G_CDS: 2.11 Total: 1.94 kcal Total: -31.19 2.10 -29.09 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_13458982_9818708.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 43.814 kcal (2) G-P(sol) polarization free energy of solvation -31.195 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 12.619 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.104 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.091 kcal (6) G-S(sol) free energy of system = (1) + (5) 14.723 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.53 seconds